RNA–Protein interactions for RNA: ENST00000520163.1

AC109479.3-201, humanhuman

TSL 3 BASIC

Gene AC109479.3, Length 360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109479.3-201ENST00000520163 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
AC109479.3-201ENST00000520163 ABCC9O60706 1549 aa30.48■■■□□ 2.47
AC109479.3-201ENST00000520163 CCDC180Q9P1Z9 1646 aa29.84■■■□□ 2.37
AC109479.3-201ENST00000520163 DNAJC5BQ9UF47 199 aa29.16■■■□□ 2.26
AC109479.3-201ENST00000520163 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.18
AC109479.3-201ENST00000520163 NACADO15069 1562 aa28.41■■■□□ 2.14
AC109479.3-201ENST00000520163 PABPN1Q86U42 306 aaKnown RBP eCLIP28.38■■■□□ 2.13
AC109479.3-201ENST00000520163 DCAF8L2P0C7V8 631 aa28.25■■■□□ 2.11
AC109479.3-201ENST00000520163 UNC13AQ9UPW8 1703 aa27.97■■■□□ 2.07
AC109479.3-201ENST00000520163 BICRAQ9NZM4 1560 aa27.96■■■□□ 2.07
AC109479.3-201ENST00000520163 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
AC109479.3-201ENST00000520163 CECR2Q9BXF3 1484 aa27.51■■□□□ 1.99
AC109479.3-201ENST00000520163 SHROOM4Q9ULL8 1493 aa27.46■■□□□ 1.99
AC109479.3-201ENST00000520163 CC2D2AQ9P2K1 1620 aa27.45■■□□□ 1.99
AC109479.3-201ENST00000520163 ZCCHC6Q5VYS8 1495 aaKnown RBP27.39■■□□□ 1.98
AC109479.3-201ENST00000520163 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
AC109479.3-201ENST00000520163 EIF4G1Q04637 1599 aaKnown RBP27.29■■□□□ 1.96
AC109479.3-201ENST00000520163 SCRIBQ14160 1630 aa27.26■■□□□ 1.95
AC109479.3-201ENST00000520163 DNAJC5Q9H3Z4 198 aa27.05■■□□□ 1.92
AC109479.3-201ENST00000520163 CUX2O14529 1486 aa26.42■■□□□ 1.82
AC109479.3-201ENST00000520163 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
AC109479.3-201ENST00000520163 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
AC109479.3-201ENST00000520163 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
AC109479.3-201ENST00000520163 NESP48681 1621 aa26.06■■□□□ 1.76
AC109479.3-201ENST00000520163 HMGXB3Q12766 1538 aa25.99■■□□□ 1.75
AC109479.3-201ENST00000520163 SMARCA2P51531 1590 aa25.98■■□□□ 1.75
AC109479.3-201ENST00000520163 SMARCA4P51532 1647 aa25.93■■□□□ 1.74
AC109479.3-201ENST00000520163 BAZ1BQ9UIG0 1483 aaKnown RBP25.83■■□□□ 1.73
AC109479.3-201ENST00000520163 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
AC109479.3-201ENST00000520163 BAZ1AQ9NRL2 1556 aaPredicted RBP25.73■■□□□ 1.71
AC109479.3-201ENST00000520163 PEG3Q9GZU2 1588 aa25.7■■□□□ 1.71
AC109479.3-201ENST00000520163 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
AC109479.3-201ENST00000520163 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
AC109479.3-201ENST00000520163 PDS5BQ9NTI5 1447 aa25.62■■□□□ 1.69
AC109479.3-201ENST00000520163 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
AC109479.3-201ENST00000520163 KIF21AQ7Z4S6 1674 aa25.57■■□□□ 1.68
AC109479.3-201ENST00000520163 CADPSQ9ULU8 1353 aa25.49■■□□□ 1.67
AC109479.3-201ENST00000520163 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
AC109479.3-201ENST00000520163 WDR62O43379 1518 aa25.37■■□□□ 1.65
AC109479.3-201ENST00000520163 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
AC109479.3-201ENST00000520163 OSCARQ8IYS5 282 aa25.19■■□□□ 1.62
AC109479.3-201ENST00000520163 WIZO95785 1651 aa25.19■■□□□ 1.62
AC109479.3-201ENST00000520163 FANCD2Q9BXW9 1451 aa25.18■■□□□ 1.62
AC109479.3-201ENST00000520163 CFTRP13569 1480 aa25.09■■□□□ 1.61
AC109479.3-201ENST00000520163 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
AC109479.3-201ENST00000520163 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
AC109479.3-201ENST00000520163 TOP2AP11388 1531 aaKnown RBP24.85■■□□□ 1.57
AC109479.3-201ENST00000520163 RIMBP3CA6NJZ7 1639 aa24.84■■□□□ 1.57
AC109479.3-201ENST00000520163 RIMBP3BA6NNM3 1639 aa24.84■■□□□ 1.57
AC109479.3-201ENST00000520163 RIMBP3Q9UFD9 1639 aa24.84■■□□□ 1.57
AC109479.3-201ENST00000520163 ZNF608Q9ULD9 1512 aaPredicted RBP24.82■■□□□ 1.56
AC109479.3-201ENST00000520163 IFT140Q96RY7 1462 aa24.76■■□□□ 1.55
AC109479.3-201ENST00000520163 ARHGEF11O15085 1522 aa24.76■■□□□ 1.55
AC109479.3-201ENST00000520163 CYB5RLQ6IPT4 315 aa24.66■■□□□ 1.54
AC109479.3-201ENST00000520163 TOPBP1Q92547 1522 aa24.65■■□□□ 1.54
AC109479.3-201ENST00000520163 CCDC88BA6NC98 1476 aa24.63■■□□□ 1.53
AC109479.3-201ENST00000520163 PRDM2Q13029 1718 aa24.56■■□□□ 1.52
AC109479.3-201ENST00000520163 EIF4G3O43432 1585 aaKnown RBP24.55■■□□□ 1.52
AC109479.3-201ENST00000520163 AQRO60306 1485 aaKnown RBP eCLIP24.53■■□□□ 1.52
AC109479.3-201ENST00000520163 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
AC109479.3-201ENST00000520163 TRHP20396 242 aaPredicted RBP24.5■■□□□ 1.51
AC109479.3-201ENST00000520163 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
AC109479.3-201ENST00000520163 DNMBPQ6XZF7 1577 aa24.46■■□□□ 1.51
AC109479.3-201ENST00000520163 FBLN2P98095 1184 aa24.44■■□□□ 1.5
AC109479.3-201ENST00000520163 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
AC109479.3-201ENST00000520163 CHD1O14646 1710 aa24.4■■□□□ 1.5
AC109479.3-201ENST00000520163 POLA1P09884 1462 aaPredicted RBP24.38■■□□□ 1.49
AC109479.3-201ENST00000520163 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
AC109479.3-201ENST00000520163 TDRD9Q8NDG6 1382 aaKnown RBP24.31■■□□□ 1.48
AC109479.3-201ENST00000520163 SOGA1O94964 1423 aa24.26■■□□□ 1.47
AC109479.3-201ENST00000520163 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
AC109479.3-201ENST00000520163 CLASP1Q7Z460 1538 aa24.21■■□□□ 1.47
AC109479.3-201ENST00000520163 CHMP7Q8WUX9 453 aaPredicted RBP24.18■■□□□ 1.46
AC109479.3-201ENST00000520163 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.46
AC109479.3-201ENST00000520163 AEBP2Q6ZN18 517 aaPredicted RBP24.11■■□□□ 1.45
AC109479.3-201ENST00000520163 MAGI1Q96QZ7 1491 aaPredicted RBP24.11■■□□□ 1.45
AC109479.3-201ENST00000520163 SYNJ1O43426 1573 aa24.09■■□□□ 1.45
AC109479.3-201ENST00000520163 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
AC109479.3-201ENST00000520163 WDR97A6NE52 1622 aa24.07■■□□□ 1.44
AC109479.3-201ENST00000520163 SYNJ2O15056 1496 aa24.06■■□□□ 1.44
AC109479.3-201ENST00000520163 CUX1P39880 1505 aa24.05■■□□□ 1.44
AC109479.3-201ENST00000520163 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
AC109479.3-201ENST00000520163 ERCC6L2Q5T890 1561 aa23.85■■□□□ 1.41
AC109479.3-201ENST00000520163 ABCA10Q8WWZ4 1543 aa23.84■■□□□ 1.41
AC109479.3-201ENST00000520163 PBRM1Q86U86 1689 aa23.83■■□□□ 1.4
AC109479.3-201ENST00000520163 ABCA5Q8WWZ7 1642 aa23.8■■□□□ 1.4
AC109479.3-201ENST00000520163 GRIN2AQ12879 1464 aa23.77■■□□□ 1.4
AC109479.3-201ENST00000520163 NUP160Q12769 1436 aa23.75■■□□□ 1.39
AC109479.3-201ENST00000520163 CEP170Q5SW79 1584 aa23.71■■□□□ 1.39
AC109479.3-201ENST00000520163 ADAMTS12P58397 1594 aa23.66■■□□□ 1.38
AC109479.3-201ENST00000520163 WRNQ14191 1432 aaPredicted RBP eCLIP23.64■■□□□ 1.37
AC109479.3-201ENST00000520163 FHAD1B1AJZ9 1412 aa23.62■■□□□ 1.37
AC109479.3-201ENST00000520163 SHROOM2Q13796 1616 aa23.61■■□□□ 1.37
AC109479.3-201ENST00000520163 PRG4Q92954 1404 aaPredicted RBP23.55■■□□□ 1.36
AC109479.3-201ENST00000520163 JPH4Q96JJ6 628 aa23.52■■□□□ 1.36
AC109479.3-201ENST00000520163 KIF13AQ9H1H9 1805 aa23.5■■□□□ 1.35
AC109479.3-201ENST00000520163 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
AC109479.3-201ENST00000520163 FAM69CQ0P6D2 419 aa23.49■■□□□ 1.35
AC109479.3-201ENST00000520163 TOP2BQ02880 1626 aa23.47■■□□□ 1.35
AC109479.3-201ENST00000520163 ABCC10Q5T3U5 1492 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms