RNA–Protein interactions for RNA: ENST00000519879.1

MED30-203, Transcript of mediator complex subunit 30, humanhuman

TSL 2

Gene MED30, Length 545 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED30-203ENST00000519879 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
MED30-203ENST00000519879 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.26
MED30-203ENST00000519879 ABCC9O60706 1549 aa22.93■■□□□ 1.26
MED30-203ENST00000519879 DCAF8L2P0C7V8 631 aa21.86■■□□□ 1.09
MED30-203ENST00000519879 RB1CC1Q8TDY2 1594 aa21.78■■□□□ 1.08
MED30-203ENST00000519879 NACADO15069 1562 aa21.67■■□□□ 1.06
MED30-203ENST00000519879 PABPN1Q86U42 306 aaKnown RBP eCLIP21.46■■□□□ 1.03
MED30-203ENST00000519879 ZCCHC6Q5VYS8 1495 aaKnown RBP21.4■■□□□ 1.02
MED30-203ENST00000519879 DNAJC5BQ9UF47 199 aa21.39■■□□□ 1.01
MED30-203ENST00000519879 MYO15BQ96JP2 1530 aa21.38■■□□□ 1.01
MED30-203ENST00000519879 UNC13AQ9UPW8 1703 aa21.35■■□□□ 1.01
MED30-203ENST00000519879 DCAF1Q9Y4B6 1507 aa21.21■□□□□ 0.99
MED30-203ENST00000519879 BICRAQ9NZM4 1560 aa21.2■□□□□ 0.98
MED30-203ENST00000519879 SCRIBQ14160 1630 aa21.08■□□□□ 0.97
MED30-203ENST00000519879 SHROOM4Q9ULL8 1493 aa20.77■□□□□ 0.92
MED30-203ENST00000519879 CC2D2AQ9P2K1 1620 aa20.66■□□□□ 0.9
MED30-203ENST00000519879 EIF4G1Q04637 1599 aaKnown RBP20.65■□□□□ 0.9
MED30-203ENST00000519879 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.89
MED30-203ENST00000519879 SMARCA4P51532 1647 aa20.06■□□□□ 0.8
MED30-203ENST00000519879 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
MED30-203ENST00000519879 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
MED30-203ENST00000519879 BAZ1AQ9NRL2 1556 aaPredicted RBP19.96■□□□□ 0.79
MED30-203ENST00000519879 SMARCA2P51531 1590 aa19.94■□□□□ 0.78
MED30-203ENST00000519879 MROH2BQ7Z745 1585 aa19.93■□□□□ 0.78
MED30-203ENST00000519879 HMGXB3Q12766 1538 aa19.87■□□□□ 0.77
MED30-203ENST00000519879 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
MED30-203ENST00000519879 PEG3Q9GZU2 1588 aa19.8■□□□□ 0.76
MED30-203ENST00000519879 NESP48681 1621 aa19.78■□□□□ 0.76
MED30-203ENST00000519879 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
MED30-203ENST00000519879 WIZO95785 1651 aa19.7■□□□□ 0.74
MED30-203ENST00000519879 DNAJC5Q9H3Z4 198 aa19.65■□□□□ 0.74
MED30-203ENST00000519879 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
MED30-203ENST00000519879 CUX2O14529 1486 aa19.54■□□□□ 0.72
MED30-203ENST00000519879 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
MED30-203ENST00000519879 CADPSQ9ULU8 1353 aa19.47■□□□□ 0.71
MED30-203ENST00000519879 KIF21AQ7Z4S6 1674 aa19.46■□□□□ 0.71
MED30-203ENST00000519879 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
MED30-203ENST00000519879 THOC2Q8NI27 1593 aaKnown RBP19.43■□□□□ 0.7
MED30-203ENST00000519879 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
MED30-203ENST00000519879 CFTRP13569 1480 aa19.28■□□□□ 0.68
MED30-203ENST00000519879 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
MED30-203ENST00000519879 FANCD2Q9BXW9 1451 aa19.27■□□□□ 0.67
MED30-203ENST00000519879 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
MED30-203ENST00000519879 CEP164Q9UPV0 1460 aa19.24■□□□□ 0.67
MED30-203ENST00000519879 WDR62O43379 1518 aa19.2■□□□□ 0.66
MED30-203ENST00000519879 URB2Q14146 1524 aaKnown RBP19.11■□□□□ 0.65
MED30-203ENST00000519879 PRDM2Q13029 1718 aa19.04■□□□□ 0.64
MED30-203ENST00000519879 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
MED30-203ENST00000519879 TOPBP1Q92547 1522 aa18.93■□□□□ 0.62
MED30-203ENST00000519879 ZNF608Q9ULD9 1512 aaPredicted RBP18.88■□□□□ 0.61
MED30-203ENST00000519879 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
MED30-203ENST00000519879 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
MED30-203ENST00000519879 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
MED30-203ENST00000519879 OSCARQ8IYS5 282 aa18.77■□□□□ 0.6
MED30-203ENST00000519879 AQRO60306 1485 aaKnown RBP eCLIP18.75■□□□□ 0.596e-6■■■■□ 25.1
MED30-203ENST00000519879 POLA1P09884 1462 aaPredicted RBP18.75■□□□□ 0.59
MED30-203ENST00000519879 RAD54L2Q9Y4B4 1467 aa18.74■□□□□ 0.59
MED30-203ENST00000519879 TRIM41Q8WV44 630 aa18.73■□□□□ 0.59
MED30-203ENST00000519879 EIF4G3O43432 1585 aaKnown RBP18.72■□□□□ 0.59
MED30-203ENST00000519879 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
MED30-203ENST00000519879 CUX1P39880 1505 aa18.69■□□□□ 0.58
MED30-203ENST00000519879 SOGA1O94964 1423 aa18.68■□□□□ 0.58
MED30-203ENST00000519879 FGD5Q6ZNL6 1462 aa18.68■□□□□ 0.58
MED30-203ENST00000519879 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
MED30-203ENST00000519879 FBLN2P98095 1184 aa18.62■□□□□ 0.57
MED30-203ENST00000519879 CHD1O14646 1710 aa18.56■□□□□ 0.56
MED30-203ENST00000519879 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.55
MED30-203ENST00000519879 RIMBP3CA6NJZ7 1639 aa18.49■□□□□ 0.55
MED30-203ENST00000519879 RIMBP3BA6NNM3 1639 aa18.49■□□□□ 0.55
MED30-203ENST00000519879 RIMBP3Q9UFD9 1639 aa18.49■□□□□ 0.55
MED30-203ENST00000519879 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
MED30-203ENST00000519879 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
MED30-203ENST00000519879 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
MED30-203ENST00000519879 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
MED30-203ENST00000519879 GRIN2BQ13224 1484 aa18.46■□□□□ 0.54
MED30-203ENST00000519879 ARHGEF11O15085 1522 aa18.45■□□□□ 0.54
MED30-203ENST00000519879 GAPVD1Q14C86 1478 aa18.44■□□□□ 0.54
MED30-203ENST00000519879 ABCA10Q8WWZ4 1543 aa18.43■□□□□ 0.54
MED30-203ENST00000519879 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
MED30-203ENST00000519879 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
MED30-203ENST00000519879 PBRM1Q86U86 1689 aa18.39■□□□□ 0.53
MED30-203ENST00000519879 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
MED30-203ENST00000519879 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
MED30-203ENST00000519879 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
MED30-203ENST00000519879 SYNJ2O15056 1496 aa18.37■□□□□ 0.53
MED30-203ENST00000519879 CLASP1Q7Z460 1538 aa18.31■□□□□ 0.52
MED30-203ENST00000519879 ARAP1Q96P48 1450 aa18.31■□□□□ 0.52
MED30-203ENST00000519879 ADAMTS12P58397 1594 aa18.24■□□□□ 0.51
MED30-203ENST00000519879 GRIN2AQ12879 1464 aa18.23■□□□□ 0.51
MED30-203ENST00000519879 FHAD1B1AJZ9 1412 aa18.2■□□□□ 0.5
MED30-203ENST00000519879 CEP170Q5SW79 1584 aa18.18■□□□□ 0.5
MED30-203ENST00000519879 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
MED30-203ENST00000519879 ERCC6L2Q5T890 1561 aa18.15■□□□□ 0.5
MED30-203ENST00000519879 NUP160Q12769 1436 aa18.15■□□□□ 0.5
MED30-203ENST00000519879 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
MED30-203ENST00000519879 IGF1RP08069 1367 aa18.08■□□□□ 0.49
MED30-203ENST00000519879 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
MED30-203ENST00000519879 JPH4Q96JJ6 628 aa18.02■□□□□ 0.48
MED30-203ENST00000519879 SHROOM2Q13796 1616 aa18.01■□□□□ 0.47
MED30-203ENST00000519879 PRG4Q92954 1404 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms