RNA–Protein interactions for RNA: ENST00000519704.1

TCEA1-205, Transcript of transcription elongation factor A1, humanhuman

TSL 4

Gene TCEA1, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-205ENST00000519704 NISCHQ9Y2I1 1504 aa51.03■■■■■ 5.76
TCEA1-205ENST00000519704 CCDC180Q9P1Z9 1646 aa45.44■■■■■ 4.86
TCEA1-205ENST00000519704 ABCC9O60706 1549 aa44.43■■■■■ 4.7
TCEA1-205ENST00000519704 RB1CC1Q8TDY2 1594 aa42.75■■■■■ 4.43
TCEA1-205ENST00000519704 NACADO15069 1562 aa42.71■■■■■ 4.43
TCEA1-205ENST00000519704 MYO15BQ96JP2 1530 aa42.49■■■■■ 4.39
TCEA1-205ENST00000519704 ZCCHC6Q5VYS8 1495 aaKnown RBP42.48■■■■■ 4.39
TCEA1-205ENST00000519704 DCAF8L2P0C7V8 631 aa42.47■■■■■ 4.39
TCEA1-205ENST00000519704 DCAF1Q9Y4B6 1507 aa42.26■■■■■ 4.36
TCEA1-205ENST00000519704 UNC13AQ9UPW8 1703 aa41.89■■■■■ 4.3
TCEA1-205ENST00000519704 BICRAQ9NZM4 1560 aa41.54■■■■■ 4.24
TCEA1-205ENST00000519704 PABPN1Q86U42 306 aaKnown RBP eCLIP41.48■■■■■ 4.23
TCEA1-205ENST00000519704 DNAJC5BQ9UF47 199 aa41.4■■■■■ 4.22
TCEA1-205ENST00000519704 SCRIBQ14160 1630 aa41.35■■■■■ 4.21
TCEA1-205ENST00000519704 SHROOM4Q9ULL8 1493 aa41.08■■■■■ 4.17
TCEA1-205ENST00000519704 EIF4G1Q04637 1599 aaKnown RBP40.4■■■■■ 4.06
TCEA1-205ENST00000519704 CC2D2AQ9P2K1 1620 aa40.25■■■■■ 4.03
TCEA1-205ENST00000519704 CECR2Q9BXF3 1484 aa39.95■■■■□ 3.99
TCEA1-205ENST00000519704 SMARCA4P51532 1647 aa39.61■■■■□ 3.93
TCEA1-205ENST00000519704 BAZ1AQ9NRL2 1556 aaPredicted RBP39.53■■■■□ 3.92
TCEA1-205ENST00000519704 NCAPD3P42695 1498 aa39.43■■■■□ 3.9
TCEA1-205ENST00000519704 ATAD2BQ9ULI0 1458 aa39.41■■■■□ 3.9
TCEA1-205ENST00000519704 SMARCA2P51531 1590 aa39.34■■■■□ 3.89
TCEA1-205ENST00000519704 MROH2BQ7Z745 1585 aa39.31■■■■□ 3.88
TCEA1-205ENST00000519704 PEG3Q9GZU2 1588 aa39.28■■■■□ 3.88
TCEA1-205ENST00000519704 HMGXB3Q12766 1538 aa39.21■■■■□ 3.87
TCEA1-205ENST00000519704 BAZ1BQ9UIG0 1483 aaKnown RBP39.02■■■■□ 3.84
TCEA1-205ENST00000519704 WIZO95785 1651 aa38.88■■■■□ 3.81
TCEA1-205ENST00000519704 RSF1Q96T23 1441 aaPredicted RBP38.82■■■■□ 3.81
TCEA1-205ENST00000519704 NESP48681 1621 aa38.46■■■■□ 3.75
TCEA1-205ENST00000519704 TOP2AP11388 1531 aaKnown RBP38.46■■■■□ 3.75
TCEA1-205ENST00000519704 LAMC3Q9Y6N6 1575 aa38.38■■■■□ 3.73
TCEA1-205ENST00000519704 ERCC6Q03468 1493 aa38.25■■■■□ 3.71
TCEA1-205ENST00000519704 CADPSQ9ULU8 1353 aa38.23■■■■□ 3.71
TCEA1-205ENST00000519704 PDS5BQ9NTI5 1447 aa38.07■■■■□ 3.69
TCEA1-205ENST00000519704 DNAJC5Q9H3Z4 198 aa38.05■■■■□ 3.68
TCEA1-205ENST00000519704 KIF21AQ7Z4S6 1674 aa38.04■■■■□ 3.68
TCEA1-205ENST00000519704 CUX2O14529 1486 aa38.03■■■■□ 3.68
TCEA1-205ENST00000519704 CFTRP13569 1480 aa38.02■■■■□ 3.68
TCEA1-205ENST00000519704 CCDC88BA6NC98 1476 aa38.01■■■■□ 3.67
TCEA1-205ENST00000519704 THOC2Q8NI27 1593 aaKnown RBP37.95■■■■□ 3.67
TCEA1-205ENST00000519704 PRDM2Q13029 1718 aa37.77■■■■□ 3.64
TCEA1-205ENST00000519704 FANCD2Q9BXW9 1451 aa37.77■■■■□ 3.64
TCEA1-205ENST00000519704 CEP164Q9UPV0 1460 aa37.71■■■■□ 3.63
TCEA1-205ENST00000519704 MRC2Q9UBG0 1479 aa37.71■■■■□ 3.63
TCEA1-205ENST00000519704 SUPT5HO00267 1087 aaKnown RBP37.63■■■■□ 3.61
TCEA1-205ENST00000519704 WDR62O43379 1518 aa37.62■■■■□ 3.61
TCEA1-205ENST00000519704 URB2Q14146 1524 aaKnown RBP37.44■■■■□ 3.58
TCEA1-205ENST00000519704 TOPBP1Q92547 1522 aa37.18■■■■□ 3.54
TCEA1-205ENST00000519704 ABCC8Q09428 1581 aa37.17■■■■□ 3.54
TCEA1-205ENST00000519704 DNMBPQ6XZF7 1577 aa37.13■■■■□ 3.53
TCEA1-205ENST00000519704 IFT140Q96RY7 1462 aa36.96■■■■□ 3.51
TCEA1-205ENST00000519704 CUX1P39880 1505 aa36.88■■■■□ 3.49
TCEA1-205ENST00000519704 POLA1P09884 1462 aaPredicted RBP36.86■■■■□ 3.49
TCEA1-205ENST00000519704 TARBP1Q13395 1621 aaKnown RBP36.84■■■■□ 3.49
TCEA1-205ENST00000519704 ZNF608Q9ULD9 1512 aaPredicted RBP36.8■■■■□ 3.48
TCEA1-205ENST00000519704 FGD5Q6ZNL6 1462 aa36.74■■■■□ 3.47
TCEA1-205ENST00000519704 RAD54L2Q9Y4B4 1467 aa36.69■■■■□ 3.46
TCEA1-205ENST00000519704 SOGA1O94964 1423 aa36.68■■■■□ 3.46
TCEA1-205ENST00000519704 EIF4G3O43432 1585 aaKnown RBP36.66■■■■□ 3.46
TCEA1-205ENST00000519704 BIVM-ERCC5R4GMW8 1640 aa36.57■■■■□ 3.44
TCEA1-205ENST00000519704 AQRO60306 1485 aaKnown RBP eCLIP36.56■■■■□ 3.444e-8■■□□□ 13.7
TCEA1-205ENST00000519704 WRNQ14191 1432 aaPredicted RBP eCLIP36.56■■■■□ 3.44
TCEA1-205ENST00000519704 TOP2BQ02880 1626 aa36.56■■■■□ 3.44
TCEA1-205ENST00000519704 WDR97A6NE52 1622 aa36.54■■■■□ 3.44
TCEA1-205ENST00000519704 SYNJ1O43426 1573 aa36.52■■■■□ 3.44
TCEA1-205ENST00000519704 TDRD9Q8NDG6 1382 aaKnown RBP36.47■■■■□ 3.43
TCEA1-205ENST00000519704 TRIM41Q8WV44 630 aa36.43■■■■□ 3.42
TCEA1-205ENST00000519704 ABCA10Q8WWZ4 1543 aa36.42■■■■□ 3.42
TCEA1-205ENST00000519704 OSCARQ8IYS5 282 aa36.35■■■■□ 3.41
TCEA1-205ENST00000519704 ABCA5Q8WWZ7 1642 aa36.3■■■■□ 3.4
TCEA1-205ENST00000519704 GRIN2BQ13224 1484 aa36.27■■■■□ 3.4
TCEA1-205ENST00000519704 GAPVD1Q14C86 1478 aa36.26■■■■□ 3.4
TCEA1-205ENST00000519704 CHD1O14646 1710 aa36.24■■■■□ 3.39
TCEA1-205ENST00000519704 PBRM1Q86U86 1689 aa36.23■■■■□ 3.39
TCEA1-205ENST00000519704 SNAPC4Q5SXM2 1469 aa36.22■■■■□ 3.39
TCEA1-205ENST00000519704 MAGI1Q96QZ7 1491 aaPredicted RBP36.19■■■■□ 3.38
TCEA1-205ENST00000519704 SYNJ2O15056 1496 aa36.05■■■■□ 3.36
TCEA1-205ENST00000519704 FBLN2P98095 1184 aa36.04■■■■□ 3.36
TCEA1-205ENST00000519704 ERICH3Q5RHP9 1530 aa35.98■■■■□ 3.35
TCEA1-205ENST00000519704 CHMP7Q8WUX9 453 aaPredicted RBP35.97■■■■□ 3.35
TCEA1-205ENST00000519704 RIMBP3CA6NJZ7 1639 aa35.95■■■■□ 3.35
TCEA1-205ENST00000519704 RIMBP3BA6NNM3 1639 aa35.95■■■■□ 3.35
TCEA1-205ENST00000519704 RIMBP3Q9UFD9 1639 aa35.95■■■■□ 3.35
TCEA1-205ENST00000519704 ADAMTS12P58397 1594 aa35.93■■■■□ 3.34
TCEA1-205ENST00000519704 CLASP1Q7Z460 1538 aa35.86■■■■□ 3.33
TCEA1-205ENST00000519704 FHAD1B1AJZ9 1412 aa35.84■■■■□ 3.33
TCEA1-205ENST00000519704 GRIN2AQ12879 1464 aa35.81■■■■□ 3.32
TCEA1-205ENST00000519704 KIF27Q86VH2 1401 aa35.8■■■■□ 3.32
TCEA1-205ENST00000519704 ARHGEF11O15085 1522 aa35.79■■■■□ 3.32
TCEA1-205ENST00000519704 IGF1RP08069 1367 aa35.72■■■■□ 3.31
TCEA1-205ENST00000519704 NUP160Q12769 1436 aa35.69■■■■□ 3.3
TCEA1-205ENST00000519704 CEP170Q5SW79 1584 aa35.66■■■■□ 3.3
TCEA1-205ENST00000519704 CUL7Q14999 1698 aa35.62■■■■□ 3.29
TCEA1-205ENST00000519704 ARAP1Q96P48 1450 aa35.51■■■■□ 3.28
TCEA1-205ENST00000519704 RUSC2Q8N2Y8 1516 aa35.49■■■■□ 3.27
TCEA1-205ENST00000519704 CARMIL1Q5VZK9 1371 aa35.47■■■■□ 3.27
TCEA1-205ENST00000519704 SHROOM2Q13796 1616 aa35.46■■■■□ 3.27
TCEA1-205ENST00000519704 CYB5RLQ6IPT4 315 aa35.39■■■■□ 3.26
TCEA1-205ENST00000519704 ERCC6L2Q5T890 1561 aa35.34■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms