RNA–Protein interactions for RNA: ENST00000519675.1

LRP12-204, Transcript of LDL receptor related protein 12, humanhuman

TSL 2

Gene LRP12, Length 5,008 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP12-204ENST00000519675 NISCHQ9Y2I1 1504 aa14.46□□□□□ -0.09
LRP12-204ENST00000519675 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
LRP12-204ENST00000519675 ABCC9O60706 1549 aa14.1□□□□□ -0.15
LRP12-204ENST00000519675 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
LRP12-204ENST00000519675 DNAJC5BQ9UF47 199 aa13.13□□□□□ -0.31
LRP12-204ENST00000519675 TRIM41Q8WV44 630 aa12.99□□□□□ -0.33
LRP12-204ENST00000519675 RB1CC1Q8TDY2 1594 aa12.88□□□□□ -0.35
LRP12-204ENST00000519675 AEBP2Q6ZN18 517 aaPredicted RBP12.79□□□□□ -0.36
LRP12-204ENST00000519675 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
LRP12-204ENST00000519675 CCDC180Q9P1Z9 1646 aa12.68□□□□□ -0.38
LRP12-204ENST00000519675 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
LRP12-204ENST00000519675 ERCC6Q03468 1493 aa12.65□□□□□ -0.38
LRP12-204ENST00000519675 TRHP20396 242 aaPredicted RBP12.62□□□□□ -0.39
LRP12-204ENST00000519675 NACADO15069 1562 aa12.52□□□□□ -0.41
LRP12-204ENST00000519675 FBLN2P98095 1184 aa12.4□□□□□ -0.42
LRP12-204ENST00000519675 SCRIBQ14160 1630 aa12.37□□□□□ -0.43
LRP12-204ENST00000519675 CHIC1Q5VXU3 224 aa12.34□□□□□ -0.43
LRP12-204ENST00000519675 SHROOM4Q9ULL8 1493 aa12.29□□□□□ -0.44
LRP12-204ENST00000519675 OSCARQ8IYS5 282 aa12.2□□□□□ -0.46
LRP12-204ENST00000519675 CC2D2AQ9P2K1 1620 aa12.12□□□□□ -0.47
LRP12-204ENST00000519675 CYB5RLQ6IPT4 315 aa12.12□□□□□ -0.47
LRP12-204ENST00000519675 FAM9AQ8IZU1 332 aaPredicted RBP12.11□□□□□ -0.47
LRP12-204ENST00000519675 NPM1P06748 294 aaKnown RBP eCLIP12.04□□□□□ -0.48
LRP12-204ENST00000519675 TTBK1Q5TCY1 1321 aaPredicted RBP12.01□□□□□ -0.49
LRP12-204ENST00000519675 EIF4G1Q04637 1599 aaKnown RBP12□□□□□ -0.49
LRP12-204ENST00000519675 PDS5BQ9NTI5 1447 aa11.97□□□□□ -0.49
LRP12-204ENST00000519675 CUX2O14529 1486 aa11.94□□□□□ -0.5
LRP12-204ENST00000519675 CHMP7Q8WUX9 453 aaPredicted RBP11.91□□□□□ -0.5
LRP12-204ENST00000519675 SMARCA2P51531 1590 aa11.85□□□□□ -0.51
LRP12-204ENST00000519675 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
LRP12-204ENST00000519675 MYO15BQ96JP2 1530 aa11.78□□□□□ -0.52
LRP12-204ENST00000519675 PLPPR3Q6T4P5 718 aa11.75□□□□□ -0.53
LRP12-204ENST00000519675 BICRAQ9NZM4 1560 aa11.74□□□□□ -0.53
LRP12-204ENST00000519675 ZCCHC6Q5VYS8 1495 aaKnown RBP11.73□□□□□ -0.53
LRP12-204ENST00000519675 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
LRP12-204ENST00000519675 SUPT5HO00267 1087 aaKnown RBP11.67□□□□□ -0.54
LRP12-204ENST00000519675 NESP48681 1621 aa11.64□□□□□ -0.55
LRP12-204ENST00000519675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
LRP12-204ENST00000519675 HNRNPUL2Q1KMD3 747 aaKnown RBP11.64□□□□□ -0.55
LRP12-204ENST00000519675 CADPSQ9ULU8 1353 aa11.61□□□□□ -0.55
LRP12-204ENST00000519675 CEP164Q9UPV0 1460 aa11.59□□□□□ -0.55
LRP12-204ENST00000519675 NCAPD3P42695 1498 aa11.58□□□□□ -0.56
LRP12-204ENST00000519675 ATAD2BQ9ULI0 1458 aa11.57□□□□□ -0.56
LRP12-204ENST00000519675 DCAF1Q9Y4B6 1507 aa11.54□□□□□ -0.56
LRP12-204ENST00000519675 ARID4BQ4LE39 1312 aaPredicted RBP11.54□□□□□ -0.56
LRP12-204ENST00000519675 MRC2Q9UBG0 1479 aa11.53□□□□□ -0.56
LRP12-204ENST00000519675 FAM69CQ0P6D2 419 aa11.5□□□□□ -0.57
LRP12-204ENST00000519675 UNC13AQ9UPW8 1703 aa11.5□□□□□ -0.57
LRP12-204ENST00000519675 ESF1Q9H501 851 aaKnown RBP11.48□□□□□ -0.57
LRP12-204ENST00000519675 ATP1B4Q9UN42 357 aaPredicted RBP11.46□□□□□ -0.58
LRP12-204ENST00000519675 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
LRP12-204ENST00000519675 BAZ1AQ9NRL2 1556 aaPredicted RBP11.43□□□□□ -0.58
LRP12-204ENST00000519675 RANGAP1P46060 587 aaPredicted RBP11.42□□□□□ -0.58
LRP12-204ENST00000519675 SCAF1Q9H7N4 1312 aaKnown RBP11.4□□□□□ -0.58
LRP12-204ENST00000519675 TDRD9Q8NDG6 1382 aaKnown RBP11.36□□□□□ -0.59
LRP12-204ENST00000519675 LAMC3Q9Y6N6 1575 aa11.35□□□□□ -0.59
LRP12-204ENST00000519675 KCNH8Q96L42 1107 aa11.33□□□□□ -0.6
LRP12-204ENST00000519675 ILDR1Q86SU0 546 aaPredicted RBP11.32□□□□□ -0.6
LRP12-204ENST00000519675 ARID3CA6NKF2 412 aa11.27□□□□□ -0.6
LRP12-204ENST00000519675 HMGXB3Q12766 1538 aa11.27□□□□□ -0.6
LRP12-204ENST00000519675 SOGA1O94964 1423 aa11.26□□□□□ -0.61
LRP12-204ENST00000519675 IFT140Q96RY7 1462 aa11.26□□□□□ -0.61
LRP12-204ENST00000519675 EHMT2Q96KQ7 1210 aa11.25□□□□□ -0.61
LRP12-204ENST00000519675 PHF23Q9BUL5 403 aaPredicted RBP11.24□□□□□ -0.61
LRP12-204ENST00000519675 AQRO60306 1485 aaKnown RBP eCLIP11.24□□□□□ -0.61
LRP12-204ENST00000519675 SMARCA4P51532 1647 aa11.23□□□□□ -0.61
LRP12-204ENST00000519675 SENP3Q9H4L4 574 aaPredicted RBP11.22□□□□□ -0.61
LRP12-204ENST00000519675 MLECQ14165 292 aa11.2□□□□□ -0.62
LRP12-204ENST00000519675 ABCC8Q09428 1581 aa11.2□□□□□ -0.62
LRP12-204ENST00000519675 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
LRP12-204ENST00000519675 JPH4Q96JJ6 628 aa11.17□□□□□ -0.62
LRP12-204ENST00000519675 MROH2BQ7Z745 1585 aa11.17□□□□□ -0.62
LRP12-204ENST00000519675 DISP3Q9P2K9 1392 aa11.16□□□□□ -0.62
LRP12-204ENST00000519675 GAPVD1Q14C86 1478 aa11.08□□□□□ -0.63
LRP12-204ENST00000519675 RSF1Q96T23 1441 aaPredicted RBP11.07□□□□□ -0.64
LRP12-204ENST00000519675 ZNF608Q9ULD9 1512 aaPredicted RBP11.06□□□□□ -0.64
LRP12-204ENST00000519675 FBXO41Q8TF61 875 aa11.05□□□□□ -0.64
LRP12-204ENST00000519675 BCANQ96GW7 911 aa11.05□□□□□ -0.64
LRP12-204ENST00000519675 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
LRP12-204ENST00000519675 P3H3Q8IVL6 736 aa11.03□□□□□ -0.64
LRP12-204ENST00000519675 CARMIL2Q6F5E8 1435 aa11.03□□□□□ -0.64
LRP12-204ENST00000519675 KIF21AQ7Z4S6 1674 aa11.03□□□□□ -0.64
LRP12-204ENST00000519675 WDR62O43379 1518 aa11.02□□□□□ -0.64
LRP12-204ENST00000519675 SYNJ1O43426 1573 aa11.02□□□□□ -0.65
LRP12-204ENST00000519675 SNAPC4Q5SXM2 1469 aa11.02□□□□□ -0.65
LRP12-204ENST00000519675 RIMBP3CA6NJZ7 1639 aa11.02□□□□□ -0.65
LRP12-204ENST00000519675 RIMBP3BA6NNM3 1639 aa11.02□□□□□ -0.65
LRP12-204ENST00000519675 RIMBP3Q9UFD9 1639 aa11.02□□□□□ -0.65
LRP12-204ENST00000519675 CFTRP13569 1480 aa11.01□□□□□ -0.65
LRP12-204ENST00000519675 GRIN2BQ13224 1484 aa11.01□□□□□ -0.65
LRP12-204ENST00000519675 DMRT2Q9Y5R5 561 aa11□□□□□ -0.65
LRP12-204ENST00000519675 THOC2Q8NI27 1593 aaKnown RBP11□□□□□ -0.65
LRP12-204ENST00000519675 RAD54L2Q9Y4B4 1467 aa10.99□□□□□ -0.65
LRP12-204ENST00000519675 PTPRGP23470 1445 aa10.99□□□□□ -0.65
LRP12-204ENST00000519675 WRNQ14191 1432 aaPredicted RBP eCLIP10.97□□□□□ -0.65
LRP12-204ENST00000519675 PRG4Q92954 1404 aaPredicted RBP10.97□□□□□ -0.65
LRP12-204ENST00000519675 URB2Q14146 1524 aaKnown RBP10.96□□□□□ -0.65
LRP12-204ENST00000519675 TOPBP1Q92547 1522 aa10.96□□□□□ -0.65
LRP12-204ENST00000519675 UBTFP17480 764 aaKnown RBP10.96□□□□□ -0.65
LRP12-204ENST00000519675 LMTK3Q96Q04 1460 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms