RNA–Protein interactions for RNA: ENST00000519549.1

ABLIM3-212, Transcript of actin binding LIM protein family member 3, humanhuman

TSL 5

Gene ABLIM3, Length 466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABLIM3-212ENST00000519549 NISCHQ9Y2I1 1504 aa23.14■■□□□ 1.3
ABLIM3-212ENST00000519549 CCDC180Q9P1Z9 1646 aa20.82■□□□□ 0.92
ABLIM3-212ENST00000519549 ABCC9O60706 1549 aa20.6■□□□□ 0.89
ABLIM3-212ENST00000519549 RB1CC1Q8TDY2 1594 aa19.75■□□□□ 0.75
ABLIM3-212ENST00000519549 NACADO15069 1562 aa19.65■□□□□ 0.74
ABLIM3-212ENST00000519549 MYO15BQ96JP2 1530 aa19.43■□□□□ 0.7
ABLIM3-212ENST00000519549 DCAF8L2P0C7V8 631 aa19.42■□□□□ 0.7
ABLIM3-212ENST00000519549 UNC13AQ9UPW8 1703 aa19.36■□□□□ 0.69
ABLIM3-212ENST00000519549 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
ABLIM3-212ENST00000519549 DCAF1Q9Y4B6 1507 aa19.19■□□□□ 0.66
ABLIM3-212ENST00000519549 ZCCHC6Q5VYS8 1495 aaKnown RBP19.18■□□□□ 0.66
ABLIM3-212ENST00000519549 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
ABLIM3-212ENST00000519549 BICRAQ9NZM4 1560 aa19.13■□□□□ 0.65
ABLIM3-212ENST00000519549 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
ABLIM3-212ENST00000519549 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
ABLIM3-212ENST00000519549 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
ABLIM3-212ENST00000519549 EIF4G1Q04637 1599 aaKnown RBP18.66■□□□□ 0.58
ABLIM3-212ENST00000519549 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
ABLIM3-212ENST00000519549 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
ABLIM3-212ENST00000519549 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
ABLIM3-212ENST00000519549 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
ABLIM3-212ENST00000519549 SMARCA2P51531 1590 aa18.03■□□□□ 0.48
ABLIM3-212ENST00000519549 HMGXB3Q12766 1538 aa17.98■□□□□ 0.47
ABLIM3-212ENST00000519549 BAZ1AQ9NRL2 1556 aaPredicted RBP17.98■□□□□ 0.47
ABLIM3-212ENST00000519549 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
ABLIM3-212ENST00000519549 BAZ1BQ9UIG0 1483 aaKnown RBP17.85■□□□□ 0.45
ABLIM3-212ENST00000519549 CUX2O14529 1486 aa17.83■□□□□ 0.45
ABLIM3-212ENST00000519549 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
ABLIM3-212ENST00000519549 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
ABLIM3-212ENST00000519549 LAMC3Q9Y6N6 1575 aa17.72■□□□□ 0.43
ABLIM3-212ENST00000519549 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
ABLIM3-212ENST00000519549 NESP48681 1621 aa17.72■□□□□ 0.43
ABLIM3-212ENST00000519549 WIZO95785 1651 aa17.61■□□□□ 0.41
ABLIM3-212ENST00000519549 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
ABLIM3-212ENST00000519549 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
ABLIM3-212ENST00000519549 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.4
ABLIM3-212ENST00000519549 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
ABLIM3-212ENST00000519549 RSF1Q96T23 1441 aaPredicted RBP17.45■□□□□ 0.38
ABLIM3-212ENST00000519549 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
ABLIM3-212ENST00000519549 MRC2Q9UBG0 1479 aa17.39■□□□□ 0.37
ABLIM3-212ENST00000519549 WDR62O43379 1518 aa17.37■□□□□ 0.37
ABLIM3-212ENST00000519549 CFTRP13569 1480 aa17.36■□□□□ 0.37
ABLIM3-212ENST00000519549 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
ABLIM3-212ENST00000519549 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
ABLIM3-212ENST00000519549 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
ABLIM3-212ENST00000519549 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
ABLIM3-212ENST00000519549 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
ABLIM3-212ENST00000519549 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
ABLIM3-212ENST00000519549 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
ABLIM3-212ENST00000519549 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
ABLIM3-212ENST00000519549 IFT140Q96RY7 1462 aa17■□□□□ 0.31
ABLIM3-212ENST00000519549 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
ABLIM3-212ENST00000519549 ZNF608Q9ULD9 1512 aaPredicted RBP16.91■□□□□ 0.3
ABLIM3-212ENST00000519549 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
ABLIM3-212ENST00000519549 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
ABLIM3-212ENST00000519549 EIF4G3O43432 1585 aaKnown RBP16.86■□□□□ 0.29
ABLIM3-212ENST00000519549 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.28
ABLIM3-212ENST00000519549 WDR97A6NE52 1622 aa16.79■□□□□ 0.28
ABLIM3-212ENST00000519549 AQRO60306 1485 aaKnown RBP eCLIP16.78■□□□□ 0.28
ABLIM3-212ENST00000519549 CHD1O14646 1710 aa16.77■□□□□ 0.28
ABLIM3-212ENST00000519549 RIMBP3CA6NJZ7 1639 aa16.77■□□□□ 0.27
ABLIM3-212ENST00000519549 RIMBP3BA6NNM3 1639 aa16.77■□□□□ 0.27
ABLIM3-212ENST00000519549 RIMBP3Q9UFD9 1639 aa16.77■□□□□ 0.27
ABLIM3-212ENST00000519549 SOGA1O94964 1423 aa16.76■□□□□ 0.27
ABLIM3-212ENST00000519549 RAD54L2Q9Y4B4 1467 aa16.73■□□□□ 0.27
ABLIM3-212ENST00000519549 SUPT5HO00267 1087 aaKnown RBP16.72■□□□□ 0.27
ABLIM3-212ENST00000519549 FGD5Q6ZNL6 1462 aa16.72■□□□□ 0.27
ABLIM3-212ENST00000519549 CUX1P39880 1505 aa16.71■□□□□ 0.27
ABLIM3-212ENST00000519549 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
ABLIM3-212ENST00000519549 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
ABLIM3-212ENST00000519549 FBLN2P98095 1184 aa16.64■□□□□ 0.25
ABLIM3-212ENST00000519549 MAGI1Q96QZ7 1491 aaPredicted RBP16.63■□□□□ 0.25
ABLIM3-212ENST00000519549 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
ABLIM3-212ENST00000519549 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
ABLIM3-212ENST00000519549 PBRM1Q86U86 1689 aa16.6■□□□□ 0.25
ABLIM3-212ENST00000519549 SYNJ1O43426 1573 aa16.57■□□□□ 0.24
ABLIM3-212ENST00000519549 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
ABLIM3-212ENST00000519549 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
ABLIM3-212ENST00000519549 GAPVD1Q14C86 1478 aa16.56■□□□□ 0.24
ABLIM3-212ENST00000519549 CYB5RLQ6IPT4 315 aa16.56■□□□□ 0.24
ABLIM3-212ENST00000519549 SYNJ2O15056 1496 aa16.55■□□□□ 0.24
ABLIM3-212ENST00000519549 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
ABLIM3-212ENST00000519549 ABCA5Q8WWZ7 1642 aa16.54■□□□□ 0.24
ABLIM3-212ENST00000519549 BIVM-ERCC5R4GMW8 1640 aa16.53■□□□□ 0.24
ABLIM3-212ENST00000519549 ARAP1Q96P48 1450 aa16.52■□□□□ 0.23
ABLIM3-212ENST00000519549 TOP2BQ02880 1626 aa16.52■□□□□ 0.23
ABLIM3-212ENST00000519549 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
ABLIM3-212ENST00000519549 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
ABLIM3-212ENST00000519549 ADAMTS12P58397 1594 aa16.39■□□□□ 0.21
ABLIM3-212ENST00000519549 GRIN2AQ12879 1464 aa16.39■□□□□ 0.21
ABLIM3-212ENST00000519549 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
ABLIM3-212ENST00000519549 NUP160Q12769 1436 aa16.35■□□□□ 0.21
ABLIM3-212ENST00000519549 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
ABLIM3-212ENST00000519549 CEP170Q5SW79 1584 aa16.32■□□□□ 0.2
ABLIM3-212ENST00000519549 SHROOM2Q13796 1616 aa16.3■□□□□ 0.2
ABLIM3-212ENST00000519549 ERCC6L2Q5T890 1561 aa16.23■□□□□ 0.19
ABLIM3-212ENST00000519549 JPH4Q96JJ6 628 aa16.19■□□□□ 0.18
ABLIM3-212ENST00000519549 CUL7Q14999 1698 aa16.18■□□□□ 0.18
ABLIM3-212ENST00000519549 KIF27Q86VH2 1401 aa16.17■□□□□ 0.18
ABLIM3-212ENST00000519549 PRG4Q92954 1404 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms