RNA–Protein interactions for RNA: ENST00000519470.1

MCM4-208, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-208ENST00000519470 NISCHQ9Y2I1 1504 aa29.71■■■□□ 2.35
MCM4-208ENST00000519470 CCDC180Q9P1Z9 1646 aa26.72■■□□□ 1.87
MCM4-208ENST00000519470 ABCC9O60706 1549 aa26.64■■□□□ 1.85
MCM4-208ENST00000519470 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
MCM4-208ENST00000519470 NACADO15069 1562 aa25.25■■□□□ 1.63
MCM4-208ENST00000519470 DNAJC5BQ9UF47 199 aa25■■□□□ 1.59
MCM4-208ENST00000519470 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
MCM4-208ENST00000519470 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
MCM4-208ENST00000519470 UNC13AQ9UPW8 1703 aa24.85■■□□□ 1.57
MCM4-208ENST00000519470 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
MCM4-208ENST00000519470 BICRAQ9NZM4 1560 aa24.68■■□□□ 1.54
MCM4-208ENST00000519470 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.54
MCM4-208ENST00000519470 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
MCM4-208ENST00000519470 SHROOM4Q9ULL8 1493 aa24.42■■□□□ 1.5
MCM4-208ENST00000519470 SCRIBQ14160 1630 aa24.25■■□□□ 1.47
MCM4-208ENST00000519470 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
MCM4-208ENST00000519470 EIF4G1Q04637 1599 aaKnown RBP24.07■■□□□ 1.44
MCM4-208ENST00000519470 CECR2Q9BXF3 1484 aa24.02■■□□□ 1.44
MCM4-208ENST00000519470 NCAPD3P42695 1498 aa23.31■■□□□ 1.32
MCM4-208ENST00000519470 ATAD2BQ9ULI0 1458 aa23.22■■□□□ 1.31
MCM4-208ENST00000519470 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
MCM4-208ENST00000519470 SMARCA2P51531 1590 aa23.15■■□□□ 1.3
MCM4-208ENST00000519470 HMGXB3Q12766 1538 aa23.15■■□□□ 1.3
MCM4-208ENST00000519470 BAZ1AQ9NRL2 1556 aaPredicted RBP23.08■■□□□ 1.29
MCM4-208ENST00000519470 CUX2O14529 1486 aa23.05■■□□□ 1.28
MCM4-208ENST00000519470 PEG3Q9GZU2 1588 aa23.02■■□□□ 1.28
MCM4-208ENST00000519470 DNAJC5Q9H3Z4 198 aa23.01■■□□□ 1.27
MCM4-208ENST00000519470 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
MCM4-208ENST00000519470 BAZ1BQ9UIG0 1483 aaKnown RBP22.97■■□□□ 1.27
MCM4-208ENST00000519470 NESP48681 1621 aa22.89■■□□□ 1.25
MCM4-208ENST00000519470 MROH2BQ7Z745 1585 aa22.87■■□□□ 1.25
MCM4-208ENST00000519470 LAMC3Q9Y6N6 1575 aa22.79■■□□□ 1.24
MCM4-208ENST00000519470 THOC2Q8NI27 1593 aaKnown RBP22.72■■□□□ 1.23
MCM4-208ENST00000519470 KIF21AQ7Z4S6 1674 aa22.62■■□□□ 1.21
MCM4-208ENST00000519470 PDS5BQ9NTI5 1447 aa22.62■■□□□ 1.21
MCM4-208ENST00000519470 WIZO95785 1651 aa22.59■■□□□ 1.21
MCM4-208ENST00000519470 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
MCM4-208ENST00000519470 MRC2Q9UBG0 1479 aa22.44■■□□□ 1.18
MCM4-208ENST00000519470 WDR62O43379 1518 aa22.41■■□□□ 1.18
MCM4-208ENST00000519470 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
MCM4-208ENST00000519470 TOP2AP11388 1531 aaKnown RBP22.34■■□□□ 1.17
MCM4-208ENST00000519470 CFTRP13569 1480 aa22.34■■□□□ 1.17
MCM4-208ENST00000519470 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.16
MCM4-208ENST00000519470 FANCD2Q9BXW9 1451 aa22.3■■□□□ 1.16
MCM4-208ENST00000519470 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
MCM4-208ENST00000519470 URB2Q14146 1524 aaKnown RBP22.13■■□□□ 1.13
MCM4-208ENST00000519470 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
MCM4-208ENST00000519470 OSCARQ8IYS5 282 aa21.91■■□□□ 1.1
MCM4-208ENST00000519470 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
MCM4-208ENST00000519470 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
MCM4-208ENST00000519470 TOPBP1Q92547 1522 aa21.89■■□□□ 1.09
MCM4-208ENST00000519470 ABCC8Q09428 1581 aa21.87■■□□□ 1.09
MCM4-208ENST00000519470 ZNF608Q9ULD9 1512 aaPredicted RBP21.84■■□□□ 1.09
MCM4-208ENST00000519470 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
MCM4-208ENST00000519470 EIF4G3O43432 1585 aaKnown RBP21.74■■□□□ 1.07
MCM4-208ENST00000519470 TARBP1Q13395 1621 aaKnown RBP21.72■■□□□ 1.07
MCM4-208ENST00000519470 RIMBP3CA6NJZ7 1639 aa21.67■■□□□ 1.06
MCM4-208ENST00000519470 RIMBP3BA6NNM3 1639 aa21.67■■□□□ 1.06
MCM4-208ENST00000519470 RIMBP3Q9UFD9 1639 aa21.67■■□□□ 1.06
MCM4-208ENST00000519470 POLA1P09884 1462 aaPredicted RBP21.67■■□□□ 1.06
MCM4-208ENST00000519470 AQRO60306 1485 aaKnown RBP eCLIP21.62■■□□□ 1.057e-11■■■■■ 41
MCM4-208ENST00000519470 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
MCM4-208ENST00000519470 CHD1O14646 1710 aa21.58■■□□□ 1.04
MCM4-208ENST00000519470 WDR97A6NE52 1622 aa21.55■■□□□ 1.04
MCM4-208ENST00000519470 RAD54L2Q9Y4B4 1467 aa21.54■■□□□ 1.04
MCM4-208ENST00000519470 SOGA1O94964 1423 aa21.53■■□□□ 1.04
MCM4-208ENST00000519470 FGD5Q6ZNL6 1462 aa21.51■■□□□ 1.03
MCM4-208ENST00000519470 CUX1P39880 1505 aa21.5■■□□□ 1.03
MCM4-208ENST00000519470 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
MCM4-208ENST00000519470 SNAPC4Q5SXM2 1469 aa21.42■■□□□ 1.02
MCM4-208ENST00000519470 MAGI1Q96QZ7 1491 aaPredicted RBP21.4■■□□□ 1.02
MCM4-208ENST00000519470 FBLN2P98095 1184 aa21.4■■□□□ 1.02
MCM4-208ENST00000519470 ARAP1Q96P48 1450 aa21.39■■□□□ 1.02
MCM4-208ENST00000519470 GRIN2BQ13224 1484 aa21.38■■□□□ 1.01
MCM4-208ENST00000519470 CLASP1Q7Z460 1538 aa21.36■■□□□ 1.01
MCM4-208ENST00000519470 CYB5RLQ6IPT4 315 aa21.36■■□□□ 1.01
MCM4-208ENST00000519470 SYNJ2O15056 1496 aa21.32■■□□□ 1
MCM4-208ENST00000519470 SYNJ1O43426 1573 aa21.32■■□□□ 1
MCM4-208ENST00000519470 ABCA10Q8WWZ4 1543 aa21.3■■□□□ 1
MCM4-208ENST00000519470 PBRM1Q86U86 1689 aa21.3■■□□□ 1
MCM4-208ENST00000519470 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
MCM4-208ENST00000519470 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
MCM4-208ENST00000519470 ABCA5Q8WWZ7 1642 aa21.28■■□□□ 1
MCM4-208ENST00000519470 SUPT5HO00267 1087 aaKnown RBP21.25■□□□□ 0.99
MCM4-208ENST00000519470 WRNQ14191 1432 aaPredicted RBP eCLIP21.18■□□□□ 0.98
MCM4-208ENST00000519470 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
MCM4-208ENST00000519470 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
MCM4-208ENST00000519470 GRIN2AQ12879 1464 aa21.11■□□□□ 0.97
MCM4-208ENST00000519470 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
MCM4-208ENST00000519470 TRHP20396 242 aaPredicted RBP21.1■□□□□ 0.97
MCM4-208ENST00000519470 NUP160Q12769 1436 aa21.06■□□□□ 0.96
MCM4-208ENST00000519470 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
MCM4-208ENST00000519470 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
MCM4-208ENST00000519470 FHAD1B1AJZ9 1412 aa21.03■□□□□ 0.96
MCM4-208ENST00000519470 SHROOM2Q13796 1616 aa20.99■□□□□ 0.95
MCM4-208ENST00000519470 ERCC6L2Q5T890 1561 aa20.98■□□□□ 0.95
MCM4-208ENST00000519470 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
MCM4-208ENST00000519470 PRG4Q92954 1404 aaPredicted RBP20.8■□□□□ 0.92
MCM4-208ENST00000519470 JPH4Q96JJ6 628 aa20.78■□□□□ 0.92
MCM4-208ENST00000519470 IGF1RP08069 1367 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms