RNA–Protein interactions for RNA: ENST00000518738.1

ATP6V1C1-202, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1C1, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-202ENST00000518738 NISCHQ9Y2I1 1504 aa33.2■■■□□ 2.91
ATP6V1C1-202ENST00000518738 CCDC180Q9P1Z9 1646 aa28.89■■■□□ 2.22
ATP6V1C1-202ENST00000518738 ZCCHC6Q5VYS8 1495 aaKnown RBP27.9■■■□□ 2.06
ATP6V1C1-202ENST00000518738 DCAF8L2P0C7V8 631 aa27.48■■□□□ 1.99
ATP6V1C1-202ENST00000518738 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
ATP6V1C1-202ENST00000518738 ABCC9O60706 1549 aa27.26■■□□□ 1.96
ATP6V1C1-202ENST00000518738 SHROOM4Q9ULL8 1493 aa27.24■■□□□ 1.95
ATP6V1C1-202ENST00000518738 MYO15BQ96JP2 1530 aa27.04■■□□□ 1.92
ATP6V1C1-202ENST00000518738 NACADO15069 1562 aa26.88■■□□□ 1.89
ATP6V1C1-202ENST00000518738 RB1CC1Q8TDY2 1594 aa26.64■■□□□ 1.86
ATP6V1C1-202ENST00000518738 SCRIBQ14160 1630 aa26.63■■□□□ 1.85
ATP6V1C1-202ENST00000518738 SUPT5HO00267 1087 aaKnown RBP26.27■■□□□ 1.8
ATP6V1C1-202ENST00000518738 UNC13AQ9UPW8 1703 aa26.15■■□□□ 1.78
ATP6V1C1-202ENST00000518738 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
ATP6V1C1-202ENST00000518738 RSF1Q96T23 1441 aaPredicted RBP25.81■■□□□ 1.72
ATP6V1C1-202ENST00000518738 CECR2Q9BXF3 1484 aa25.8■■□□□ 1.72
ATP6V1C1-202ENST00000518738 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
ATP6V1C1-202ENST00000518738 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
ATP6V1C1-202ENST00000518738 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
ATP6V1C1-202ENST00000518738 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
ATP6V1C1-202ENST00000518738 WIZO95785 1651 aa25.49■■□□□ 1.67
ATP6V1C1-202ENST00000518738 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
ATP6V1C1-202ENST00000518738 PEG3Q9GZU2 1588 aa25.16■■□□□ 1.62
ATP6V1C1-202ENST00000518738 CHIC1Q5VXU3 224 aa25.16■■□□□ 1.62
ATP6V1C1-202ENST00000518738 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
ATP6V1C1-202ENST00000518738 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
ATP6V1C1-202ENST00000518738 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
ATP6V1C1-202ENST00000518738 CCDC88BA6NC98 1476 aa24.95■■□□□ 1.58
ATP6V1C1-202ENST00000518738 BAZ1BQ9UIG0 1483 aaKnown RBP24.94■■□□□ 1.58
ATP6V1C1-202ENST00000518738 NCAPD3P42695 1498 aa24.8■■□□□ 1.56
ATP6V1C1-202ENST00000518738 HMGXB3Q12766 1538 aa24.79■■□□□ 1.56
ATP6V1C1-202ENST00000518738 CC2D2AQ9P2K1 1620 aa24.67■■□□□ 1.54
ATP6V1C1-202ENST00000518738 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
ATP6V1C1-202ENST00000518738 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
ATP6V1C1-202ENST00000518738 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
ATP6V1C1-202ENST00000518738 CFTRP13569 1480 aa24.3■■□□□ 1.48
ATP6V1C1-202ENST00000518738 FAM9AQ8IZU1 332 aaPredicted RBP24.25■■□□□ 1.47
ATP6V1C1-202ENST00000518738 LOC105371045A0A1W2PR82 267 aa24.23■■□□□ 1.47
ATP6V1C1-202ENST00000518738 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
ATP6V1C1-202ENST00000518738 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
ATP6V1C1-202ENST00000518738 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
ATP6V1C1-202ENST00000518738 TOP2BQ02880 1626 aa24.08■■□□□ 1.45
ATP6V1C1-202ENST00000518738 BIVM-ERCC5R4GMW8 1640 aa24.05■■□□□ 1.44
ATP6V1C1-202ENST00000518738 SOGA1O94964 1423 aa24.04■■□□□ 1.44
ATP6V1C1-202ENST00000518738 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
ATP6V1C1-202ENST00000518738 CUX1P39880 1505 aa23.99■■□□□ 1.43
ATP6V1C1-202ENST00000518738 EEA1Q15075 1411 aa23.99■■□□□ 1.43
ATP6V1C1-202ENST00000518738 NESP48681 1621 aa23.97■■□□□ 1.43
ATP6V1C1-202ENST00000518738 LAMC3Q9Y6N6 1575 aa23.96■■□□□ 1.43
ATP6V1C1-202ENST00000518738 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
ATP6V1C1-202ENST00000518738 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
ATP6V1C1-202ENST00000518738 EHMT2Q96KQ7 1210 aa23.93■■□□□ 1.42
ATP6V1C1-202ENST00000518738 CSRNP3Q8WYN3 585 aa23.87■■□□□ 1.41
ATP6V1C1-202ENST00000518738 PDS5BQ9NTI5 1447 aa23.78■■□□□ 1.4
ATP6V1C1-202ENST00000518738 CEP164Q9UPV0 1460 aa23.78■■□□□ 1.4
ATP6V1C1-202ENST00000518738 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
ATP6V1C1-202ENST00000518738 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
ATP6V1C1-202ENST00000518738 KIF21AQ7Z4S6 1674 aa23.69■■□□□ 1.38
ATP6V1C1-202ENST00000518738 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
ATP6V1C1-202ENST00000518738 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
ATP6V1C1-202ENST00000518738 KIF21BO75037 1637 aa23.68■■□□□ 1.38
ATP6V1C1-202ENST00000518738 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
ATP6V1C1-202ENST00000518738 URB2Q14146 1524 aaKnown RBP23.63■■□□□ 1.37
ATP6V1C1-202ENST00000518738 UBTFP17480 764 aaKnown RBP23.62■■□□□ 1.37
ATP6V1C1-202ENST00000518738 TNIKQ9UKE5 1360 aa23.62■■□□□ 1.37
ATP6V1C1-202ENST00000518738 CUX2O14529 1486 aa23.6■■□□□ 1.37
ATP6V1C1-202ENST00000518738 POLA1P09884 1462 aaPredicted RBP23.59■■□□□ 1.37
ATP6V1C1-202ENST00000518738 RAPGEF2Q9Y4G8 1499 aa23.55■■□□□ 1.36
ATP6V1C1-202ENST00000518738 PRXQ9BXM0 1461 aa23.53■■□□□ 1.36
ATP6V1C1-202ENST00000518738 CEP162Q5TB80 1403 aa23.52■■□□□ 1.36
ATP6V1C1-202ENST00000518738 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
ATP6V1C1-202ENST00000518738 ERICH3Q5RHP9 1530 aa23.5■■□□□ 1.35
ATP6V1C1-202ENST00000518738 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
ATP6V1C1-202ENST00000518738 MRC2Q9UBG0 1479 aa23.46■■□□□ 1.35
ATP6V1C1-202ENST00000518738 IGF1RP08069 1367 aa23.45■■□□□ 1.34
ATP6V1C1-202ENST00000518738 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
ATP6V1C1-202ENST00000518738 ERCC6Q03468 1493 aa23.38■■□□□ 1.33
ATP6V1C1-202ENST00000518738 CARMIL1Q5VZK9 1371 aa23.34■■□□□ 1.33
ATP6V1C1-202ENST00000518738 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.32
ATP6V1C1-202ENST00000518738 WDR62O43379 1518 aa23.33■■□□□ 1.32
ATP6V1C1-202ENST00000518738 CLIP1P30622 1438 aa23.32■■□□□ 1.32
ATP6V1C1-202ENST00000518738 ABCA5Q8WWZ7 1642 aa23.3■■□□□ 1.32
ATP6V1C1-202ENST00000518738 TDRD9Q8NDG6 1382 aaKnown RBP23.29■■□□□ 1.32
ATP6V1C1-202ENST00000518738 GAPVD1Q14C86 1478 aa23.27■■□□□ 1.32
ATP6V1C1-202ENST00000518738 CUL7Q14999 1698 aa23.26■■□□□ 1.31
ATP6V1C1-202ENST00000518738 PCGF6Q9BYE7 350 aa23.25■■□□□ 1.31
ATP6V1C1-202ENST00000518738 RANGAP1P46060 587 aaPredicted RBP23.24■■□□□ 1.31
ATP6V1C1-202ENST00000518738 THOC2Q8NI27 1593 aaKnown RBP23.24■■□□□ 1.31
ATP6V1C1-202ENST00000518738 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
ATP6V1C1-202ENST00000518738 IFT140Q96RY7 1462 aa23.18■■□□□ 1.3
ATP6V1C1-202ENST00000518738 PBRM1Q86U86 1689 aa23.14■■□□□ 1.29
ATP6V1C1-202ENST00000518738 AQRO60306 1485 aaKnown RBP eCLIP23.12■■□□□ 1.29
ATP6V1C1-202ENST00000518738 PPARGC1BQ86YN6 1023 aaKnown RBP23.12■■□□□ 1.29
ATP6V1C1-202ENST00000518738 VPS8Q8N3P4 1428 aa23.12■■□□□ 1.29
ATP6V1C1-202ENST00000518738 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.29
ATP6V1C1-202ENST00000518738 ARAP1Q96P48 1450 aa23.06■■□□□ 1.28
ATP6V1C1-202ENST00000518738 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
ATP6V1C1-202ENST00000518738 CTTNBP2Q8WZ74 1663 aa23.04■■□□□ 1.28
ATP6V1C1-202ENST00000518738 ARHGAP35Q9NRY4 1499 aa23.04■■□□□ 1.28
ATP6V1C1-202ENST00000518738 EIF4G3O43432 1585 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms