RNA–Protein interactions for RNA: ENST00000518647.5

IKBKB-208, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 1,543 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-208ENST00000518647 NISCHQ9Y2I1 1504 aa31.6■■■□□ 2.65
IKBKB-208ENST00000518647 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
IKBKB-208ENST00000518647 ABCC9O60706 1549 aa27.61■■■□□ 2.01
IKBKB-208ENST00000518647 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
IKBKB-208ENST00000518647 DCAF8L2P0C7V8 631 aa26.5■■□□□ 1.83
IKBKB-208ENST00000518647 NACADO15069 1562 aa26.48■■□□□ 1.83
IKBKB-208ENST00000518647 MYO15BQ96JP2 1530 aa26.3■■□□□ 1.8
IKBKB-208ENST00000518647 ZCCHC6Q5VYS8 1495 aaKnown RBP26.29■■□□□ 1.8
IKBKB-208ENST00000518647 DCAF1Q9Y4B6 1507 aa26.14■■□□□ 1.78
IKBKB-208ENST00000518647 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
IKBKB-208ENST00000518647 PABPN1Q86U42 306 aaKnown RBP eCLIP25.83■■□□□ 1.72
IKBKB-208ENST00000518647 BICRAQ9NZM4 1560 aa25.69■■□□□ 1.7
IKBKB-208ENST00000518647 SCRIBQ14160 1630 aa25.63■■□□□ 1.69
IKBKB-208ENST00000518647 SHROOM4Q9ULL8 1493 aa25.45■■□□□ 1.67
IKBKB-208ENST00000518647 DNAJC5BQ9UF47 199 aa25.45■■□□□ 1.66
IKBKB-208ENST00000518647 EIF4G1Q04637 1599 aaKnown RBP25.04■■□□□ 1.6
IKBKB-208ENST00000518647 CC2D2AQ9P2K1 1620 aa24.95■■□□□ 1.59
IKBKB-208ENST00000518647 CECR2Q9BXF3 1484 aa24.83■■□□□ 1.57
IKBKB-208ENST00000518647 SMARCA4P51532 1647 aa24.51■■□□□ 1.51
IKBKB-208ENST00000518647 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
IKBKB-208ENST00000518647 NCAPD3P42695 1498 aa24.45■■□□□ 1.5
IKBKB-208ENST00000518647 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
IKBKB-208ENST00000518647 SMARCA2P51531 1590 aa24.39■■□□□ 1.5
IKBKB-208ENST00000518647 MROH2BQ7Z745 1585 aa24.34■■□□□ 1.49
IKBKB-208ENST00000518647 PEG3Q9GZU2 1588 aa24.29■■□□□ 1.48
IKBKB-208ENST00000518647 HMGXB3Q12766 1538 aa24.28■■□□□ 1.48
IKBKB-208ENST00000518647 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
IKBKB-208ENST00000518647 RSF1Q96T23 1441 aaPredicted RBP24.07■■□□□ 1.44
IKBKB-208ENST00000518647 WIZO95785 1651 aa24.05■■□□□ 1.44
IKBKB-208ENST00000518647 NESP48681 1621 aa23.86■■□□□ 1.41
IKBKB-208ENST00000518647 ERCC6Q03468 1493 aa23.83■■□□□ 1.4
IKBKB-208ENST00000518647 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
IKBKB-208ENST00000518647 LAMC3Q9Y6N6 1575 aa23.79■■□□□ 1.4
IKBKB-208ENST00000518647 CADPSQ9ULU8 1353 aa23.75■■□□□ 1.39
IKBKB-208ENST00000518647 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
IKBKB-208ENST00000518647 CUX2O14529 1486 aa23.59■■□□□ 1.37
IKBKB-208ENST00000518647 CFTRP13569 1480 aa23.57■■□□□ 1.36
IKBKB-208ENST00000518647 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
IKBKB-208ENST00000518647 KIF21AQ7Z4S6 1674 aa23.53■■□□□ 1.36
IKBKB-208ENST00000518647 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
IKBKB-208ENST00000518647 FANCD2Q9BXW9 1451 aa23.45■■□□□ 1.34
IKBKB-208ENST00000518647 CEP164Q9UPV0 1460 aa23.42■■□□□ 1.34
IKBKB-208ENST00000518647 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
IKBKB-208ENST00000518647 MRC2Q9UBG0 1479 aa23.41■■□□□ 1.34
IKBKB-208ENST00000518647 WDR62O43379 1518 aa23.32■■□□□ 1.32
IKBKB-208ENST00000518647 PRDM2Q13029 1718 aa23.29■■□□□ 1.32
IKBKB-208ENST00000518647 URB2Q14146 1524 aaKnown RBP23.2■■□□□ 1.3
IKBKB-208ENST00000518647 ABCC8Q09428 1581 aa23.08■■□□□ 1.29
IKBKB-208ENST00000518647 TOPBP1Q92547 1522 aa23.05■■□□□ 1.28
IKBKB-208ENST00000518647 DNAJC5Q9H3Z4 198 aa23.02■■□□□ 1.28
IKBKB-208ENST00000518647 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
IKBKB-208ENST00000518647 IFT140Q96RY7 1462 aa22.95■■□□□ 1.26
IKBKB-208ENST00000518647 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
IKBKB-208ENST00000518647 CUX1P39880 1505 aa22.84■■□□□ 1.25
IKBKB-208ENST00000518647 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
IKBKB-208ENST00000518647 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
IKBKB-208ENST00000518647 SOGA1O94964 1423 aa22.79■■□□□ 1.24
IKBKB-208ENST00000518647 TARBP1Q13395 1621 aaKnown RBP22.78■■□□□ 1.24
IKBKB-208ENST00000518647 RAD54L2Q9Y4B4 1467 aa22.76■■□□□ 1.23
IKBKB-208ENST00000518647 AQRO60306 1485 aaKnown RBP eCLIP22.71■■□□□ 1.236e-6■■■■□ 25.1
IKBKB-208ENST00000518647 EIF4G3O43432 1585 aaKnown RBP22.71■■□□□ 1.23
IKBKB-208ENST00000518647 WRNQ14191 1432 aaPredicted RBP eCLIP22.69■■□□□ 1.22
IKBKB-208ENST00000518647 TDRD9Q8NDG6 1382 aaKnown RBP22.67■■□□□ 1.22
IKBKB-208ENST00000518647 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
IKBKB-208ENST00000518647 TOP2BQ02880 1626 aa22.62■■□□□ 1.21
IKBKB-208ENST00000518647 WDR97A6NE52 1622 aa22.61■■□□□ 1.21
IKBKB-208ENST00000518647 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
IKBKB-208ENST00000518647 BIVM-ERCC5R4GMW8 1640 aa22.59■■□□□ 1.21
IKBKB-208ENST00000518647 ABCA10Q8WWZ4 1543 aa22.56■■□□□ 1.2
IKBKB-208ENST00000518647 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
IKBKB-208ENST00000518647 GAPVD1Q14C86 1478 aa22.51■■□□□ 1.19
IKBKB-208ENST00000518647 FBLN2P98095 1184 aa22.5■■□□□ 1.19
IKBKB-208ENST00000518647 SNAPC4Q5SXM2 1469 aa22.48■■□□□ 1.19
IKBKB-208ENST00000518647 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
IKBKB-208ENST00000518647 ABCA5Q8WWZ7 1642 aa22.45■■□□□ 1.18
IKBKB-208ENST00000518647 CHMP7Q8WUX9 453 aaPredicted RBP22.42■■□□□ 1.18
IKBKB-208ENST00000518647 CHD1O14646 1710 aa22.42■■□□□ 1.18
IKBKB-208ENST00000518647 PBRM1Q86U86 1689 aa22.4■■□□□ 1.18
IKBKB-208ENST00000518647 SYNJ2O15056 1496 aa22.38■■□□□ 1.17
IKBKB-208ENST00000518647 ERICH3Q5RHP9 1530 aa22.29■■□□□ 1.16
IKBKB-208ENST00000518647 FHAD1B1AJZ9 1412 aa22.25■■□□□ 1.15
IKBKB-208ENST00000518647 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
IKBKB-208ENST00000518647 KIF27Q86VH2 1401 aa22.24■■□□□ 1.15
IKBKB-208ENST00000518647 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
IKBKB-208ENST00000518647 ARHGEF11O15085 1522 aa22.22■■□□□ 1.15
IKBKB-208ENST00000518647 TRIM41Q8WV44 630 aa22.21■■□□□ 1.15
IKBKB-208ENST00000518647 RIMBP3CA6NJZ7 1639 aa22.21■■□□□ 1.15
IKBKB-208ENST00000518647 RIMBP3BA6NNM3 1639 aa22.21■■□□□ 1.15
IKBKB-208ENST00000518647 RIMBP3Q9UFD9 1639 aa22.21■■□□□ 1.15
IKBKB-208ENST00000518647 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
IKBKB-208ENST00000518647 IGF1RP08069 1367 aa22.16■■□□□ 1.14
IKBKB-208ENST00000518647 NUP160Q12769 1436 aa22.13■■□□□ 1.13
IKBKB-208ENST00000518647 CEP170Q5SW79 1584 aa22.08■■□□□ 1.13
IKBKB-208ENST00000518647 CYB5RLQ6IPT4 315 aa22.08■■□□□ 1.13
IKBKB-208ENST00000518647 CUL7Q14999 1698 aa22.05■■□□□ 1.12
IKBKB-208ENST00000518647 ARAP1Q96P48 1450 aa22.04■■□□□ 1.12
IKBKB-208ENST00000518647 CARMIL1Q5VZK9 1371 aa22.03■■□□□ 1.12
IKBKB-208ENST00000518647 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
IKBKB-208ENST00000518647 JPH4Q96JJ6 628 aa21.95■■□□□ 1.1
IKBKB-208ENST00000518647 SHROOM2Q13796 1616 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms