RNA–Protein interactions for RNA: ENST00000518628.1

GPAT4-202, Transcript of glycerol-3-phosphate acyltransferase 4, humanhuman

TSL 3

Gene GPAT4, Length 1,063 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT4-202ENST00000518628 NISCHQ9Y2I1 1504 aa42.99■■■■■ 4.47
GPAT4-202ENST00000518628 CCDC180Q9P1Z9 1646 aa38.41■■■■□ 3.74
GPAT4-202ENST00000518628 ABCC9O60706 1549 aa38.1■■■■□ 3.69
GPAT4-202ENST00000518628 RB1CC1Q8TDY2 1594 aa36.44■■■■□ 3.42
GPAT4-202ENST00000518628 NACADO15069 1562 aa36.28■■■■□ 3.4
GPAT4-202ENST00000518628 DCAF8L2P0C7V8 631 aa36.16■■■■□ 3.38
GPAT4-202ENST00000518628 MYO15BQ96JP2 1530 aa35.93■■■■□ 3.34
GPAT4-202ENST00000518628 ZCCHC6Q5VYS8 1495 aaKnown RBP35.69■■■■□ 3.3
GPAT4-202ENST00000518628 DCAF1Q9Y4B6 1507 aa35.57■■■■□ 3.28
GPAT4-202ENST00000518628 PABPN1Q86U42 306 aaKnown RBP eCLIP35.55■■■■□ 3.281e-5■□□□□ 8.6
GPAT4-202ENST00000518628 UNC13AQ9UPW8 1703 aa35.52■■■■□ 3.28
GPAT4-202ENST00000518628 DNAJC5BQ9UF47 199 aa35.48■■■■□ 3.27
GPAT4-202ENST00000518628 BICRAQ9NZM4 1560 aa35.33■■■■□ 3.25
GPAT4-202ENST00000518628 SCRIBQ14160 1630 aa34.99■■■■□ 3.19
GPAT4-202ENST00000518628 SHROOM4Q9ULL8 1493 aa34.97■■■■□ 3.19
GPAT4-202ENST00000518628 EIF4G1Q04637 1599 aaKnown RBP34.45■■■■□ 3.11
GPAT4-202ENST00000518628 CC2D2AQ9P2K1 1620 aa34.44■■■■□ 3.1
GPAT4-202ENST00000518628 CECR2Q9BXF3 1484 aa34.32■■■■□ 3.08
GPAT4-202ENST00000518628 NCAPD3P42695 1498 aa33.51■■■□□ 2.96
GPAT4-202ENST00000518628 SMARCA4P51532 1647 aa33.43■■■□□ 2.94
GPAT4-202ENST00000518628 ATAD2BQ9ULI0 1458 aa33.43■■■□□ 2.94
GPAT4-202ENST00000518628 BAZ1AQ9NRL2 1556 aaPredicted RBP33.36■■■□□ 2.93
GPAT4-202ENST00000518628 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
GPAT4-202ENST00000518628 HMGXB3Q12766 1538 aa33.26■■■□□ 2.91
GPAT4-202ENST00000518628 PEG3Q9GZU2 1588 aa33.15■■■□□ 2.9
GPAT4-202ENST00000518628 BAZ1BQ9UIG0 1483 aaKnown RBP33.11■■■□□ 2.89
GPAT4-202ENST00000518628 MROH2BQ7Z745 1585 aa33.1■■■□□ 2.89
GPAT4-202ENST00000518628 ERCC6Q03468 1493 aa32.89■■■□□ 2.86
GPAT4-202ENST00000518628 NESP48681 1621 aa32.8■■■□□ 2.84
GPAT4-202ENST00000518628 CUX2O14529 1486 aa32.75■■■□□ 2.83
GPAT4-202ENST00000518628 WIZO95785 1651 aa32.69■■■□□ 2.82
GPAT4-202ENST00000518628 LAMC3Q9Y6N6 1575 aa32.67■■■□□ 2.82
GPAT4-202ENST00000518628 RSF1Q96T23 1441 aaPredicted RBP32.57■■■□□ 2.8
GPAT4-202ENST00000518628 CADPSQ9ULU8 1353 aa32.51■■■□□ 2.79
GPAT4-202ENST00000518628 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.79
GPAT4-202ENST00000518628 THOC2Q8NI27 1593 aaKnown RBP32.41■■■□□ 2.78
GPAT4-202ENST00000518628 DNAJC5Q9H3Z4 198 aa32.4■■■□□ 2.78
GPAT4-202ENST00000518628 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
GPAT4-202ENST00000518628 TOP2AP11388 1531 aaKnown RBP32.35■■■□□ 2.77
GPAT4-202ENST00000518628 CFTRP13569 1480 aa32.19■■■□□ 2.74
GPAT4-202ENST00000518628 MRC2Q9UBG0 1479 aa32.17■■■□□ 2.74
GPAT4-202ENST00000518628 FANCD2Q9BXW9 1451 aa32.1■■■□□ 2.73
GPAT4-202ENST00000518628 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
GPAT4-202ENST00000518628 WDR62O43379 1518 aa32.08■■■□□ 2.73
GPAT4-202ENST00000518628 CCDC88BA6NC98 1476 aa31.99■■■□□ 2.71
GPAT4-202ENST00000518628 PRDM2Q13029 1718 aa31.81■■■□□ 2.68
GPAT4-202ENST00000518628 URB2Q14146 1524 aaKnown RBP31.8■■■□□ 2.68
GPAT4-202ENST00000518628 ABCC8Q09428 1581 aa31.54■■■□□ 2.64
GPAT4-202ENST00000518628 TOPBP1Q92547 1522 aa31.53■■■□□ 2.64
GPAT4-202ENST00000518628 IFT140Q96RY7 1462 aa31.48■■■□□ 2.63
GPAT4-202ENST00000518628 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
GPAT4-202ENST00000518628 SUPT5HO00267 1087 aaKnown RBP31.35■■■□□ 2.61
GPAT4-202ENST00000518628 OSCARQ8IYS5 282 aa31.35■■■□□ 2.61
GPAT4-202ENST00000518628 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
GPAT4-202ENST00000518628 POLA1P09884 1462 aaPredicted RBP31.22■■■□□ 2.59
GPAT4-202ENST00000518628 TARBP1Q13395 1621 aaKnown RBP31.2■■■□□ 2.59
GPAT4-202ENST00000518628 EIF4G3O43432 1585 aaKnown RBP31.17■■■□□ 2.58
GPAT4-202ENST00000518628 AQRO60306 1485 aaKnown RBP eCLIP31.13■■■□□ 2.576e-6■□□□□ 8.5
GPAT4-202ENST00000518628 SOGA1O94964 1423 aa31.12■■■□□ 2.57
GPAT4-202ENST00000518628 RAD54L2Q9Y4B4 1467 aa31.09■■■□□ 2.57
GPAT4-202ENST00000518628 CUX1P39880 1505 aa31.08■■■□□ 2.57
GPAT4-202ENST00000518628 FGD5Q6ZNL6 1462 aa31.07■■■□□ 2.56
GPAT4-202ENST00000518628 TRIM41Q8WV44 630 aa31.06■■■□□ 2.56
GPAT4-202ENST00000518628 TDRD9Q8NDG6 1382 aaKnown RBP31■■■□□ 2.55
GPAT4-202ENST00000518628 WDR97A6NE52 1622 aa30.96■■■□□ 2.55
GPAT4-202ENST00000518628 FBLN2P98095 1184 aa30.87■■■□□ 2.53
GPAT4-202ENST00000518628 CHD1O14646 1710 aa30.85■■■□□ 2.53
GPAT4-202ENST00000518628 RIMBP3CA6NJZ7 1639 aa30.81■■■□□ 2.52
GPAT4-202ENST00000518628 RIMBP3BA6NNM3 1639 aa30.81■■■□□ 2.52
GPAT4-202ENST00000518628 RIMBP3Q9UFD9 1639 aa30.81■■■□□ 2.52
GPAT4-202ENST00000518628 GRIN2BQ13224 1484 aa30.81■■■□□ 2.52
GPAT4-202ENST00000518628 SNAPC4Q5SXM2 1469 aa30.81■■■□□ 2.52
GPAT4-202ENST00000518628 ARHGEF11O15085 1522 aa30.78■■■□□ 2.52
GPAT4-202ENST00000518628 MAGI1Q96QZ7 1491 aaPredicted RBP30.77■■■□□ 2.52
GPAT4-202ENST00000518628 ABCA10Q8WWZ4 1543 aa30.76■■■□□ 2.51
GPAT4-202ENST00000518628 CHMP7Q8WUX9 453 aaPredicted RBP30.73■■■□□ 2.51
GPAT4-202ENST00000518628 GAPVD1Q14C86 1478 aa30.73■■■□□ 2.51
GPAT4-202ENST00000518628 WRNQ14191 1432 aaPredicted RBP eCLIP30.72■■■□□ 2.51
GPAT4-202ENST00000518628 TOP2BQ02880 1626 aa30.68■■■□□ 2.5
GPAT4-202ENST00000518628 BIVM-ERCC5R4GMW8 1640 aa30.66■■■□□ 2.5
GPAT4-202ENST00000518628 SYNJ2O15056 1496 aa30.66■■■□□ 2.5
GPAT4-202ENST00000518628 ABCA5Q8WWZ7 1642 aa30.64■■■□□ 2.5
GPAT4-202ENST00000518628 PBRM1Q86U86 1689 aa30.63■■■□□ 2.49
GPAT4-202ENST00000518628 SYNJ1O43426 1573 aa30.62■■■□□ 2.49
GPAT4-202ENST00000518628 CLASP1Q7Z460 1538 aa30.57■■■□□ 2.48
GPAT4-202ENST00000518628 CYB5RLQ6IPT4 315 aa30.56■■■□□ 2.48
GPAT4-202ENST00000518628 ARAP1Q96P48 1450 aa30.49■■■□□ 2.47
GPAT4-202ENST00000518628 GRIN2AQ12879 1464 aa30.39■■■□□ 2.46
GPAT4-202ENST00000518628 ERICH3Q5RHP9 1530 aa30.38■■■□□ 2.45
GPAT4-202ENST00000518628 ADAMTS12P58397 1594 aa30.38■■■□□ 2.45
GPAT4-202ENST00000518628 FHAD1B1AJZ9 1412 aa30.37■■■□□ 2.45
GPAT4-202ENST00000518628 NUP160Q12769 1436 aa30.3■■■□□ 2.44
GPAT4-202ENST00000518628 CEP170Q5SW79 1584 aa30.24■■■□□ 2.43
GPAT4-202ENST00000518628 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
GPAT4-202ENST00000518628 TRHP20396 242 aaPredicted RBP30.12■■■□□ 2.41
GPAT4-202ENST00000518628 IGF1RP08069 1367 aa30.09■■■□□ 2.41
GPAT4-202ENST00000518628 SHROOM2Q13796 1616 aa30.09■■■□□ 2.41
GPAT4-202ENST00000518628 ERCC6L2Q5T890 1561 aa30.07■■■□□ 2.4
GPAT4-202ENST00000518628 JPH4Q96JJ6 628 aa30.02■■■□□ 2.4
GPAT4-202ENST00000518628 CUL7Q14999 1698 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms