RNA–Protein interactions for RNA: ENST00000518321.5

TVP23C-205, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-205ENST00000518321 NISCHQ9Y2I1 1504 aa34.96■■■■□ 3.19
TVP23C-205ENST00000518321 CCDC180Q9P1Z9 1646 aa31.37■■■□□ 2.61
TVP23C-205ENST00000518321 ABCC9O60706 1549 aa31.33■■■□□ 2.61
TVP23C-205ENST00000518321 RB1CC1Q8TDY2 1594 aa29.86■■■□□ 2.37
TVP23C-205ENST00000518321 NACADO15069 1562 aa29.66■■■□□ 2.34
TVP23C-205ENST00000518321 DCAF8L2P0C7V8 631 aa29.51■■■□□ 2.31
TVP23C-205ENST00000518321 DNAJC5BQ9UF47 199 aa29.33■■■□□ 2.29
TVP23C-205ENST00000518321 MYO15BQ96JP2 1530 aa29.26■■■□□ 2.27
TVP23C-205ENST00000518321 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
TVP23C-205ENST00000518321 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.25
TVP23C-205ENST00000518321 ZCCHC6Q5VYS8 1495 aaKnown RBP28.98■■■□□ 2.23
TVP23C-205ENST00000518321 BICRAQ9NZM4 1560 aa28.94■■■□□ 2.22
TVP23C-205ENST00000518321 DCAF1Q9Y4B6 1507 aa28.89■■■□□ 2.22
TVP23C-205ENST00000518321 SHROOM4Q9ULL8 1493 aa28.61■■■□□ 2.17
TVP23C-205ENST00000518321 SCRIBQ14160 1630 aa28.57■■■□□ 2.16
TVP23C-205ENST00000518321 AEBP2Q6ZN18 517 aaPredicted RBP28.35■■■□□ 2.13
TVP23C-205ENST00000518321 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
TVP23C-205ENST00000518321 EIF4G1Q04637 1599 aaKnown RBP28.25■■■□□ 2.11
TVP23C-205ENST00000518321 CECR2Q9BXF3 1484 aa28.22■■■□□ 2.11
TVP23C-205ENST00000518321 NCAPD3P42695 1498 aa27.37■■□□□ 1.97
TVP23C-205ENST00000518321 ATAD2BQ9ULI0 1458 aa27.29■■□□□ 1.96
TVP23C-205ENST00000518321 CHIC1Q5VXU3 224 aa27.27■■□□□ 1.96
TVP23C-205ENST00000518321 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
TVP23C-205ENST00000518321 SMARCA2P51531 1590 aa27.23■■□□□ 1.95
TVP23C-205ENST00000518321 HMGXB3Q12766 1538 aa27.17■■□□□ 1.94
TVP23C-205ENST00000518321 BAZ1AQ9NRL2 1556 aaPredicted RBP27.15■■□□□ 1.94
TVP23C-205ENST00000518321 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
TVP23C-205ENST00000518321 BAZ1BQ9UIG0 1483 aaKnown RBP27.04■■□□□ 1.92
TVP23C-205ENST00000518321 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.92
TVP23C-205ENST00000518321 CUX2O14529 1486 aa27■■□□□ 1.91
TVP23C-205ENST00000518321 DNAJC5Q9H3Z4 198 aa26.95■■□□□ 1.9
TVP23C-205ENST00000518321 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
TVP23C-205ENST00000518321 NESP48681 1621 aa26.9■■□□□ 1.9
TVP23C-205ENST00000518321 LAMC3Q9Y6N6 1575 aa26.75■■□□□ 1.87
TVP23C-205ENST00000518321 THOC2Q8NI27 1593 aaKnown RBP26.63■■□□□ 1.85
TVP23C-205ENST00000518321 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
TVP23C-205ENST00000518321 WIZO95785 1651 aa26.6■■□□□ 1.85
TVP23C-205ENST00000518321 KIF21AQ7Z4S6 1674 aa26.57■■□□□ 1.84
TVP23C-205ENST00000518321 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
TVP23C-205ENST00000518321 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.81
TVP23C-205ENST00000518321 MRC2Q9UBG0 1479 aa26.36■■□□□ 1.81
TVP23C-205ENST00000518321 WDR62O43379 1518 aa26.29■■□□□ 1.8
TVP23C-205ENST00000518321 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
TVP23C-205ENST00000518321 CEP164Q9UPV0 1460 aa26.28■■□□□ 1.8
TVP23C-205ENST00000518321 CFTRP13569 1480 aa26.24■■□□□ 1.79
TVP23C-205ENST00000518321 FANCD2Q9BXW9 1451 aa26.24■■□□□ 1.79
TVP23C-205ENST00000518321 URB2Q14146 1524 aaKnown RBP26.01■■□□□ 1.75
TVP23C-205ENST00000518321 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
TVP23C-205ENST00000518321 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
TVP23C-205ENST00000518321 OSCARQ8IYS5 282 aa25.79■■□□□ 1.72
TVP23C-205ENST00000518321 TRIM41Q8WV44 630 aa25.78■■□□□ 1.72
TVP23C-205ENST00000518321 IFT140Q96RY7 1462 aa25.75■■□□□ 1.71
TVP23C-205ENST00000518321 TOPBP1Q92547 1522 aa25.74■■□□□ 1.71
TVP23C-205ENST00000518321 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
TVP23C-205ENST00000518321 ZNF608Q9ULD9 1512 aaPredicted RBP25.68■■□□□ 1.7
TVP23C-205ENST00000518321 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
TVP23C-205ENST00000518321 EIF4G3O43432 1585 aaKnown RBP25.55■■□□□ 1.68
TVP23C-205ENST00000518321 TARBP1Q13395 1621 aaKnown RBP25.5■■□□□ 1.67
TVP23C-205ENST00000518321 POLA1P09884 1462 aaPredicted RBP25.48■■□□□ 1.67
TVP23C-205ENST00000518321 AQRO60306 1485 aaKnown RBP eCLIP25.45■■□□□ 1.66
TVP23C-205ENST00000518321 RIMBP3CA6NJZ7 1639 aa25.42■■□□□ 1.66
TVP23C-205ENST00000518321 RIMBP3BA6NNM3 1639 aa25.42■■□□□ 1.66
TVP23C-205ENST00000518321 RIMBP3Q9UFD9 1639 aa25.42■■□□□ 1.66
TVP23C-205ENST00000518321 SOGA1O94964 1423 aa25.37■■□□□ 1.65
TVP23C-205ENST00000518321 RAD54L2Q9Y4B4 1467 aa25.37■■□□□ 1.65
TVP23C-205ENST00000518321 ARHGEF11O15085 1522 aa25.35■■□□□ 1.65
TVP23C-205ENST00000518321 CHD1O14646 1710 aa25.34■■□□□ 1.65
TVP23C-205ENST00000518321 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
TVP23C-205ENST00000518321 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
TVP23C-205ENST00000518321 FBLN2P98095 1184 aa25.31■■□□□ 1.64
TVP23C-205ENST00000518321 CUX1P39880 1505 aa25.29■■□□□ 1.64
TVP23C-205ENST00000518321 WDR97A6NE52 1622 aa25.28■■□□□ 1.64
TVP23C-205ENST00000518321 SUPT5HO00267 1087 aaKnown RBP25.26■■□□□ 1.63
TVP23C-205ENST00000518321 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
TVP23C-205ENST00000518321 CYB5RLQ6IPT4 315 aa25.18■■□□□ 1.62
TVP23C-205ENST00000518321 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
TVP23C-205ENST00000518321 MAGI1Q96QZ7 1491 aaPredicted RBP25.15■■□□□ 1.62
TVP23C-205ENST00000518321 CHMP7Q8WUX9 453 aaPredicted RBP25.14■■□□□ 1.62
TVP23C-205ENST00000518321 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
TVP23C-205ENST00000518321 SYNJ1O43426 1573 aa25.08■■□□□ 1.61
TVP23C-205ENST00000518321 SYNJ2O15056 1496 aa25.08■■□□□ 1.6
TVP23C-205ENST00000518321 GAPVD1Q14C86 1478 aa25.07■■□□□ 1.6
TVP23C-205ENST00000518321 CLASP1Q7Z460 1538 aa25.06■■□□□ 1.6
TVP23C-205ENST00000518321 ABCA10Q8WWZ4 1543 aa25.05■■□□□ 1.6
TVP23C-205ENST00000518321 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
TVP23C-205ENST00000518321 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
TVP23C-205ENST00000518321 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
TVP23C-205ENST00000518321 TOP2BQ02880 1626 aa24.91■■□□□ 1.58
TVP23C-205ENST00000518321 BIVM-ERCC5R4GMW8 1640 aa24.91■■□□□ 1.58
TVP23C-205ENST00000518321 TRHP20396 242 aaPredicted RBP24.91■■□□□ 1.58
TVP23C-205ENST00000518321 GRIN2AQ12879 1464 aa24.83■■□□□ 1.56
TVP23C-205ENST00000518321 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
TVP23C-205ENST00000518321 FHAD1B1AJZ9 1412 aa24.76■■□□□ 1.55
TVP23C-205ENST00000518321 ERICH3Q5RHP9 1530 aa24.75■■□□□ 1.55
TVP23C-205ENST00000518321 NUP160Q12769 1436 aa24.74■■□□□ 1.55
TVP23C-205ENST00000518321 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
TVP23C-205ENST00000518321 ERCC6L2Q5T890 1561 aa24.65■■□□□ 1.54
TVP23C-205ENST00000518321 SHROOM2Q13796 1616 aa24.61■■□□□ 1.53
TVP23C-205ENST00000518321 PRG4Q92954 1404 aaPredicted RBP24.51■■□□□ 1.51
TVP23C-205ENST00000518321 JPH4Q96JJ6 628 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms