RNA–Protein interactions for RNA: ENST00000518315.5

PSD3-207, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 2

Gene PSD3, Length 1,806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-207ENST00000518315 NISCHQ9Y2I1 1504 aa30.65■■■□□ 2.5
PSD3-207ENST00000518315 CCDC180Q9P1Z9 1646 aa27.13■■□□□ 1.93
PSD3-207ENST00000518315 ABCC9O60706 1549 aa26.5■■□□□ 1.83
PSD3-207ENST00000518315 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
PSD3-207ENST00000518315 ZCCHC6Q5VYS8 1495 aaKnown RBP25.54■■□□□ 1.68
PSD3-207ENST00000518315 NACADO15069 1562 aa25.51■■□□□ 1.67
PSD3-207ENST00000518315 RB1CC1Q8TDY2 1594 aa25.49■■□□□ 1.67
PSD3-207ENST00000518315 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
PSD3-207ENST00000518315 DCAF1Q9Y4B6 1507 aa25.35■■□□□ 1.65
PSD3-207ENST00000518315 UNC13AQ9UPW8 1703 aa24.96■■□□□ 1.59
PSD3-207ENST00000518315 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.57
PSD3-207ENST00000518315 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
PSD3-207ENST00000518315 SCRIBQ14160 1630 aa24.78■■□□□ 1.56
PSD3-207ENST00000518315 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
PSD3-207ENST00000518315 DNAJC5BQ9UF47 199 aa24.35■■□□□ 1.49
PSD3-207ENST00000518315 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
PSD3-207ENST00000518315 CC2D2AQ9P2K1 1620 aa23.97■■□□□ 1.43
PSD3-207ENST00000518315 CECR2Q9BXF3 1484 aa23.9■■□□□ 1.42
PSD3-207ENST00000518315 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
PSD3-207ENST00000518315 BAZ1AQ9NRL2 1556 aaPredicted RBP23.7■■□□□ 1.38
PSD3-207ENST00000518315 MROH2BQ7Z745 1585 aa23.63■■□□□ 1.37
PSD3-207ENST00000518315 ATAD2BQ9ULI0 1458 aa23.61■■□□□ 1.37
PSD3-207ENST00000518315 NCAPD3P42695 1498 aa23.59■■□□□ 1.37
PSD3-207ENST00000518315 SMARCA2P51531 1590 aa23.53■■□□□ 1.36
PSD3-207ENST00000518315 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
PSD3-207ENST00000518315 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
PSD3-207ENST00000518315 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
PSD3-207ENST00000518315 BAZ1BQ9UIG0 1483 aaKnown RBP23.37■■□□□ 1.33
PSD3-207ENST00000518315 WIZO95785 1651 aa23.37■■□□□ 1.33
PSD3-207ENST00000518315 TOP2AP11388 1531 aaKnown RBP23.1■■□□□ 1.29
PSD3-207ENST00000518315 NESP48681 1621 aa23■■□□□ 1.27
PSD3-207ENST00000518315 CADPSQ9ULU8 1353 aa22.9■■□□□ 1.26
PSD3-207ENST00000518315 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.26
PSD3-207ENST00000518315 CCDC88BA6NC98 1476 aa22.88■■□□□ 1.25
PSD3-207ENST00000518315 SUPT5HO00267 1087 aaKnown RBP22.87■■□□□ 1.25
PSD3-207ENST00000518315 CFTRP13569 1480 aa22.79■■□□□ 1.24
PSD3-207ENST00000518315 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
PSD3-207ENST00000518315 PDS5BQ9NTI5 1447 aa22.74■■□□□ 1.23
PSD3-207ENST00000518315 KIF21AQ7Z4S6 1674 aa22.67■■□□□ 1.22
PSD3-207ENST00000518315 FANCD2Q9BXW9 1451 aa22.61■■□□□ 1.21
PSD3-207ENST00000518315 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.2
PSD3-207ENST00000518315 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
PSD3-207ENST00000518315 PRDM2Q13029 1718 aa22.54■■□□□ 1.2
PSD3-207ENST00000518315 CUX2O14529 1486 aa22.53■■□□□ 1.2
PSD3-207ENST00000518315 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
PSD3-207ENST00000518315 WDR62O43379 1518 aa22.44■■□□□ 1.18
PSD3-207ENST00000518315 URB2Q14146 1524 aaKnown RBP22.4■■□□□ 1.18
PSD3-207ENST00000518315 TOPBP1Q92547 1522 aa22.27■■□□□ 1.16
PSD3-207ENST00000518315 ABCC8Q09428 1581 aa22.24■■□□□ 1.15
PSD3-207ENST00000518315 DNMBPQ6XZF7 1577 aa22.22■■□□□ 1.15
PSD3-207ENST00000518315 CUX1P39880 1505 aa22.15■■□□□ 1.14
PSD3-207ENST00000518315 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
PSD3-207ENST00000518315 IFT140Q96RY7 1462 aa22.08■■□□□ 1.13
PSD3-207ENST00000518315 FGD5Q6ZNL6 1462 aa22.04■■□□□ 1.12
PSD3-207ENST00000518315 WRNQ14191 1432 aaPredicted RBP eCLIP22.03■■□□□ 1.12
PSD3-207ENST00000518315 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.12
PSD3-207ENST00000518315 ZNF608Q9ULD9 1512 aaPredicted RBP22.02■■□□□ 1.12
PSD3-207ENST00000518315 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
PSD3-207ENST00000518315 SOGA1O94964 1423 aa22.01■■□□□ 1.11
PSD3-207ENST00000518315 SYNJ1O43426 1573 aa21.98■■□□□ 1.11
PSD3-207ENST00000518315 TOP2BQ02880 1626 aa21.96■■□□□ 1.11
PSD3-207ENST00000518315 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
PSD3-207ENST00000518315 AQRO60306 1485 aaKnown RBP eCLIP21.92■■□□□ 1.1
PSD3-207ENST00000518315 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.09
PSD3-207ENST00000518315 EIF4G3O43432 1585 aaKnown RBP21.88■■□□□ 1.09
PSD3-207ENST00000518315 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
PSD3-207ENST00000518315 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
PSD3-207ENST00000518315 DNAJC5Q9H3Z4 198 aa21.8■■□□□ 1.08
PSD3-207ENST00000518315 GAPVD1Q14C86 1478 aa21.74■■□□□ 1.07
PSD3-207ENST00000518315 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
PSD3-207ENST00000518315 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
PSD3-207ENST00000518315 SNAPC4Q5SXM2 1469 aa21.67■■□□□ 1.06
PSD3-207ENST00000518315 OSCARQ8IYS5 282 aa21.66■■□□□ 1.06
PSD3-207ENST00000518315 PBRM1Q86U86 1689 aa21.64■■□□□ 1.06
PSD3-207ENST00000518315 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.05
PSD3-207ENST00000518315 FBLN2P98095 1184 aa21.59■■□□□ 1.05
PSD3-207ENST00000518315 TRIM41Q8WV44 630 aa21.59■■□□□ 1.05
PSD3-207ENST00000518315 CHD1O14646 1710 aa21.58■■□□□ 1.05
PSD3-207ENST00000518315 SYNJ2O15056 1496 aa21.57■■□□□ 1.04
PSD3-207ENST00000518315 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
PSD3-207ENST00000518315 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
PSD3-207ENST00000518315 KIF27Q86VH2 1401 aa21.55■■□□□ 1.04
PSD3-207ENST00000518315 IGF1RP08069 1367 aa21.53■■□□□ 1.04
PSD3-207ENST00000518315 ADAMTS12P58397 1594 aa21.5■■□□□ 1.03
PSD3-207ENST00000518315 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
PSD3-207ENST00000518315 RUSC2Q8N2Y8 1516 aa21.47■■□□□ 1.03
PSD3-207ENST00000518315 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.03
PSD3-207ENST00000518315 GRIN2AQ12879 1464 aa21.44■■□□□ 1.02
PSD3-207ENST00000518315 CLASP1Q7Z460 1538 aa21.38■■□□□ 1.01
PSD3-207ENST00000518315 NUP160Q12769 1436 aa21.37■■□□□ 1.01
PSD3-207ENST00000518315 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
PSD3-207ENST00000518315 CUL7Q14999 1698 aa21.35■■□□□ 1.01
PSD3-207ENST00000518315 CEP170Q5SW79 1584 aa21.34■■□□□ 1.01
PSD3-207ENST00000518315 ARHGEF11O15085 1522 aa21.28■■□□□ 1
PSD3-207ENST00000518315 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
PSD3-207ENST00000518315 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
PSD3-207ENST00000518315 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
PSD3-207ENST00000518315 RAPGEF2Q9Y4G8 1499 aa21.22■□□□□ 0.99
PSD3-207ENST00000518315 CSRNP3Q8WYN3 585 aa21.22■□□□□ 0.99
PSD3-207ENST00000518315 PRXQ9BXM0 1461 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms