RNA–Protein interactions for RNA: ENST00000518247.5

ERGIC1-203, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 4

Gene ERGIC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-203ENST00000518247 NISCHQ9Y2I1 1504 aa27.63■■■□□ 2.01
ERGIC1-203ENST00000518247 CCDC180Q9P1Z9 1646 aa24.67■■□□□ 1.54
ERGIC1-203ENST00000518247 ABCC9O60706 1549 aa24.36■■□□□ 1.49
ERGIC1-203ENST00000518247 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
ERGIC1-203ENST00000518247 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
ERGIC1-203ENST00000518247 NACADO15069 1562 aa23.21■■□□□ 1.31
ERGIC1-203ENST00000518247 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
ERGIC1-203ENST00000518247 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
ERGIC1-203ENST00000518247 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
ERGIC1-203ENST00000518247 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
ERGIC1-203ENST00000518247 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.23
ERGIC1-203ENST00000518247 SCRIBQ14160 1630 aa22.58■■□□□ 1.21
ERGIC1-203ENST00000518247 BICRAQ9NZM4 1560 aa22.58■■□□□ 1.2
ERGIC1-203ENST00000518247 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
ERGIC1-203ENST00000518247 SHROOM4Q9ULL8 1493 aa22.27■■□□□ 1.16
ERGIC1-203ENST00000518247 EIF4G1Q04637 1599 aaKnown RBP22.03■■□□□ 1.12
ERGIC1-203ENST00000518247 CC2D2AQ9P2K1 1620 aa22■■□□□ 1.11
ERGIC1-203ENST00000518247 CECR2Q9BXF3 1484 aa21.88■■□□□ 1.09
ERGIC1-203ENST00000518247 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
ERGIC1-203ENST00000518247 BAZ1AQ9NRL2 1556 aaPredicted RBP21.45■■□□□ 1.02
ERGIC1-203ENST00000518247 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
ERGIC1-203ENST00000518247 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.02
ERGIC1-203ENST00000518247 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
ERGIC1-203ENST00000518247 MROH2BQ7Z745 1585 aa21.32■■□□□ 1
ERGIC1-203ENST00000518247 HMGXB3Q12766 1538 aa21.3■■□□□ 1
ERGIC1-203ENST00000518247 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
ERGIC1-203ENST00000518247 PEG3Q9GZU2 1588 aa21.23■□□□□ 0.99
ERGIC1-203ENST00000518247 WIZO95785 1651 aa21.13■□□□□ 0.97
ERGIC1-203ENST00000518247 ERCC6Q03468 1493 aa21.05■□□□□ 0.96
ERGIC1-203ENST00000518247 NESP48681 1621 aa21.01■□□□□ 0.95
ERGIC1-203ENST00000518247 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
ERGIC1-203ENST00000518247 LAMC3Q9Y6N6 1575 aa20.9■□□□□ 0.94
ERGIC1-203ENST00000518247 TOP2AP11388 1531 aaKnown RBP20.85■□□□□ 0.93
ERGIC1-203ENST00000518247 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
ERGIC1-203ENST00000518247 CUX2O14529 1486 aa20.78■□□□□ 0.92
ERGIC1-203ENST00000518247 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
ERGIC1-203ENST00000518247 PDS5BQ9NTI5 1447 aa20.77■□□□□ 0.91
ERGIC1-203ENST00000518247 THOC2Q8NI27 1593 aaKnown RBP20.71■□□□□ 0.91
ERGIC1-203ENST00000518247 CFTRP13569 1480 aa20.61■□□□□ 0.89
ERGIC1-203ENST00000518247 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
ERGIC1-203ENST00000518247 CCDC88BA6NC98 1476 aa20.59■□□□□ 0.89
ERGIC1-203ENST00000518247 FANCD2Q9BXW9 1451 aa20.59■□□□□ 0.89
ERGIC1-203ENST00000518247 MRC2Q9UBG0 1479 aa20.58■□□□□ 0.89
ERGIC1-203ENST00000518247 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
ERGIC1-203ENST00000518247 WDR62O43379 1518 aa20.49■□□□□ 0.87
ERGIC1-203ENST00000518247 SUPT5HO00267 1087 aaKnown RBP20.46■□□□□ 0.87
ERGIC1-203ENST00000518247 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
ERGIC1-203ENST00000518247 DNAJC5Q9H3Z4 198 aa20.31■□□□□ 0.84
ERGIC1-203ENST00000518247 TOPBP1Q92547 1522 aa20.23■□□□□ 0.83
ERGIC1-203ENST00000518247 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
ERGIC1-203ENST00000518247 ABCC8Q09428 1581 aa20.18■□□□□ 0.82
ERGIC1-203ENST00000518247 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
ERGIC1-203ENST00000518247 ZNF608Q9ULD9 1512 aaPredicted RBP20.07■□□□□ 0.8
ERGIC1-203ENST00000518247 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
ERGIC1-203ENST00000518247 EIF4G3O43432 1585 aaKnown RBP20.03■□□□□ 0.8
ERGIC1-203ENST00000518247 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.79
ERGIC1-203ENST00000518247 CUX1P39880 1505 aa20.02■□□□□ 0.79
ERGIC1-203ENST00000518247 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
ERGIC1-203ENST00000518247 RAD54L2Q9Y4B4 1467 aa19.99■□□□□ 0.79
ERGIC1-203ENST00000518247 SOGA1O94964 1423 aa19.96■□□□□ 0.79
ERGIC1-203ENST00000518247 AQRO60306 1485 aaKnown RBP eCLIP19.95■□□□□ 0.78
ERGIC1-203ENST00000518247 OSCARQ8IYS5 282 aa19.9■□□□□ 0.78
ERGIC1-203ENST00000518247 TDRD9Q8NDG6 1382 aaKnown RBP19.89■□□□□ 0.77
ERGIC1-203ENST00000518247 FBLN2P98095 1184 aa19.84■□□□□ 0.77
ERGIC1-203ENST00000518247 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
ERGIC1-203ENST00000518247 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
ERGIC1-203ENST00000518247 CHD1O14646 1710 aa19.83■□□□□ 0.77
ERGIC1-203ENST00000518247 SYNJ1O43426 1573 aa19.81■□□□□ 0.76
ERGIC1-203ENST00000518247 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
ERGIC1-203ENST00000518247 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
ERGIC1-203ENST00000518247 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
ERGIC1-203ENST00000518247 PBRM1Q86U86 1689 aa19.77■□□□□ 0.76
ERGIC1-203ENST00000518247 GRIN2BQ13224 1484 aa19.75■□□□□ 0.75
ERGIC1-203ENST00000518247 GAPVD1Q14C86 1478 aa19.74■□□□□ 0.75
ERGIC1-203ENST00000518247 TRIM41Q8WV44 630 aa19.74■□□□□ 0.75
ERGIC1-203ENST00000518247 ABCA10Q8WWZ4 1543 aa19.74■□□□□ 0.75
ERGIC1-203ENST00000518247 ABCA5Q8WWZ7 1642 aa19.71■□□□□ 0.75
ERGIC1-203ENST00000518247 MAGI1Q96QZ7 1491 aaPredicted RBP19.7■□□□□ 0.74
ERGIC1-203ENST00000518247 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
ERGIC1-203ENST00000518247 RIMBP3CA6NJZ7 1639 aa19.65■□□□□ 0.74
ERGIC1-203ENST00000518247 RIMBP3BA6NNM3 1639 aa19.65■□□□□ 0.74
ERGIC1-203ENST00000518247 RIMBP3Q9UFD9 1639 aa19.65■□□□□ 0.74
ERGIC1-203ENST00000518247 SYNJ2O15056 1496 aa19.63■□□□□ 0.73
ERGIC1-203ENST00000518247 ARHGEF11O15085 1522 aa19.61■□□□□ 0.73
ERGIC1-203ENST00000518247 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
ERGIC1-203ENST00000518247 CLASP1Q7Z460 1538 aa19.53■□□□□ 0.72
ERGIC1-203ENST00000518247 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
ERGIC1-203ENST00000518247 GRIN2AQ12879 1464 aa19.5■□□□□ 0.71
ERGIC1-203ENST00000518247 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
ERGIC1-203ENST00000518247 CYB5RLQ6IPT4 315 aa19.47■□□□□ 0.71
ERGIC1-203ENST00000518247 KIF27Q86VH2 1401 aa19.43■□□□□ 0.7
ERGIC1-203ENST00000518247 CEP170Q5SW79 1584 aa19.43■□□□□ 0.7
ERGIC1-203ENST00000518247 ARAP1Q96P48 1450 aa19.42■□□□□ 0.7
ERGIC1-203ENST00000518247 NUP160Q12769 1436 aa19.37■□□□□ 0.69
ERGIC1-203ENST00000518247 CUL7Q14999 1698 aa19.35■□□□□ 0.69
ERGIC1-203ENST00000518247 IGF1RP08069 1367 aa19.32■□□□□ 0.68
ERGIC1-203ENST00000518247 ERCC6L2Q5T890 1561 aa19.29■□□□□ 0.68
ERGIC1-203ENST00000518247 RUSC2Q8N2Y8 1516 aa19.27■□□□□ 0.68
ERGIC1-203ENST00000518247 SHROOM2Q13796 1616 aa19.26■□□□□ 0.67
ERGIC1-203ENST00000518247 CARMIL1Q5VZK9 1371 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms