RNA–Protein interactions for RNA: ENST00000518145.1

UBR5-203, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

TSL 4

Gene UBR5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-203ENST00000518145 AEBP2Q6ZN18 517 aaPredicted RBP19.74■□□□□ 0.75
UBR5-203ENST00000518145 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
UBR5-203ENST00000518145 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
UBR5-203ENST00000518145 NISCHQ9Y2I1 1504 aa16.55■□□□□ 0.24
UBR5-203ENST00000518145 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
UBR5-203ENST00000518145 FOXD1Q16676 465 aa15.64■□□□□ 0.09
UBR5-203ENST00000518145 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
UBR5-203ENST00000518145 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
UBR5-203ENST00000518145 ADRA2BP18089 450 aa14.65□□□□□ -0.06
UBR5-203ENST00000518145 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
UBR5-203ENST00000518145 PIAS4Q8N2W9 510 aaPredicted RBP14.59□□□□□ -0.07
UBR5-203ENST00000518145 MSH5O43196 834 aa14.49□□□□□ -0.09
UBR5-203ENST00000518145 POTEDQ86YR6 584 aa14.23□□□□□ -0.13
UBR5-203ENST00000518145 ZCCHC6Q5VYS8 1495 aaKnown RBP13.93□□□□□ -0.18
UBR5-203ENST00000518145 ABCC9O60706 1549 aa13.92□□□□□ -0.18
UBR5-203ENST00000518145 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
UBR5-203ENST00000518145 MYO15BQ96JP2 1530 aa13.69□□□□□ -0.22
UBR5-203ENST00000518145 NACADO15069 1562 aa13.58□□□□□ -0.23
UBR5-203ENST00000518145 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
UBR5-203ENST00000518145 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
UBR5-203ENST00000518145 UNC13AQ9UPW8 1703 aa13.46□□□□□ -0.25
UBR5-203ENST00000518145 BICRAQ9NZM4 1560 aa13.35□□□□□ -0.27
UBR5-203ENST00000518145 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
UBR5-203ENST00000518145 DMRT2Q9Y5R5 561 aa13.26□□□□□ -0.29
UBR5-203ENST00000518145 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
UBR5-203ENST00000518145 SCAF1Q9H7N4 1312 aaKnown RBP13.18□□□□□ -0.3
UBR5-203ENST00000518145 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
UBR5-203ENST00000518145 SHROOM4Q9ULL8 1493 aa13.04□□□□□ -0.32
UBR5-203ENST00000518145 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
UBR5-203ENST00000518145 CECR2Q9BXF3 1484 aa12.92□□□□□ -0.34
UBR5-203ENST00000518145 EIF4G1Q04637 1599 aaKnown RBP12.82□□□□□ -0.36
UBR5-203ENST00000518145 SMARCA4P51532 1647 aa12.81□□□□□ -0.36
UBR5-203ENST00000518145 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
UBR5-203ENST00000518145 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
UBR5-203ENST00000518145 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.37
UBR5-203ENST00000518145 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
UBR5-203ENST00000518145 PEG3Q9GZU2 1588 aa12.76□□□□□ -0.37
UBR5-203ENST00000518145 BAZ1AQ9NRL2 1556 aaPredicted RBP12.73□□□□□ -0.37
UBR5-203ENST00000518145 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.38
UBR5-203ENST00000518145 CC2D2AQ9P2K1 1620 aa12.69□□□□□ -0.38
UBR5-203ENST00000518145 WIZO95785 1651 aa12.68□□□□□ -0.38
UBR5-203ENST00000518145 RNF216Q9NWF9 866 aaPredicted RBP12.65□□□□□ -0.38
UBR5-203ENST00000518145 DNAJC5BQ9UF47 199 aa12.65□□□□□ -0.38
UBR5-203ENST00000518145 ATAD2BQ9ULI0 1458 aa12.64□□□□□ -0.39
UBR5-203ENST00000518145 HMGXB3Q12766 1538 aa12.57□□□□□ -0.4
UBR5-203ENST00000518145 NCAPD3P42695 1498 aa12.57□□□□□ -0.4
UBR5-203ENST00000518145 SMARCA2P51531 1590 aa12.54□□□□□ -0.4
UBR5-203ENST00000518145 TOP2AP11388 1531 aaKnown RBP12.52□□□□□ -0.41
UBR5-203ENST00000518145 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
UBR5-203ENST00000518145 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
UBR5-203ENST00000518145 NPM3O75607 178 aaKnown RBP12.45□□□□□ -0.42
UBR5-203ENST00000518145 RNF39Q9H2S5 420 aa12.44□□□□□ -0.42
UBR5-203ENST00000518145 BAZ1BQ9UIG0 1483 aaKnown RBP12.43□□□□□ -0.42
UBR5-203ENST00000518145 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
UBR5-203ENST00000518145 KCNA4P22459 653 aa12.28□□□□□ -0.44
UBR5-203ENST00000518145 SUPT5HO00267 1087 aaKnown RBP12.26□□□□□ -0.45
UBR5-203ENST00000518145 NESP48681 1621 aa12.24□□□□□ -0.45
UBR5-203ENST00000518145 CFTRP13569 1480 aa12.21□□□□□ -0.45
UBR5-203ENST00000518145 PRDM2Q13029 1718 aa12.21□□□□□ -0.45
UBR5-203ENST00000518145 C1QBPQ07021 282 aaKnown RBP12.18□□□□□ -0.46
UBR5-203ENST00000518145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.17□□□□□ -0.467e-8■■■■□ 25
UBR5-203ENST00000518145 LAMC3Q9Y6N6 1575 aa12.16□□□□□ -0.46
UBR5-203ENST00000518145 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
UBR5-203ENST00000518145 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
UBR5-203ENST00000518145 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
UBR5-203ENST00000518145 ABCC8Q09428 1581 aa12.02□□□□□ -0.49
UBR5-203ENST00000518145 FANCD2Q9BXW9 1451 aa12.02□□□□□ -0.49
UBR5-203ENST00000518145 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
UBR5-203ENST00000518145 SYNJ1O43426 1573 aa12.01□□□□□ -0.49
UBR5-203ENST00000518145 CUX1P39880 1505 aa12□□□□□ -0.49
UBR5-203ENST00000518145 U3KPZ7 1027 aaPredicted RBP11.99□□□□□ -0.49
UBR5-203ENST00000518145 BIVM-ERCC5R4GMW8 1640 aa11.97□□□□□ -0.49
UBR5-203ENST00000518145 WDR62O43379 1518 aa11.96□□□□□ -0.49
UBR5-203ENST00000518145 CEP164Q9UPV0 1460 aa11.94□□□□□ -0.5
UBR5-203ENST00000518145 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
UBR5-203ENST00000518145 PDS5BQ9NTI5 1447 aa11.92□□□□□ -0.5
UBR5-203ENST00000518145 DNMBPQ6XZF7 1577 aa11.92□□□□□ -0.5
UBR5-203ENST00000518145 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
UBR5-203ENST00000518145 WDR97A6NE52 1622 aa11.91□□□□□ -0.5
UBR5-203ENST00000518145 SLC4A2P04920 1241 aa11.91□□□□□ -0.5
UBR5-203ENST00000518145 MRC2Q9UBG0 1479 aa11.9□□□□□ -0.5
UBR5-203ENST00000518145 CUX2O14529 1486 aa11.89□□□□□ -0.51
UBR5-203ENST00000518145 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
UBR5-203ENST00000518145 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
UBR5-203ENST00000518145 POLA1P09884 1462 aaPredicted RBP11.85□□□□□ -0.51
UBR5-203ENST00000518145 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
UBR5-203ENST00000518145 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
UBR5-203ENST00000518145 ERCC6Q03468 1493 aa11.79□□□□□ -0.52
UBR5-203ENST00000518145 ABCA5Q8WWZ7 1642 aa11.78□□□□□ -0.52
UBR5-203ENST00000518145 RAD54L2Q9Y4B4 1467 aa11.77□□□□□ -0.52
UBR5-203ENST00000518145 CAPN15O75808 1086 aa11.75□□□□□ -0.53
UBR5-203ENST00000518145 ABCA10Q8WWZ4 1543 aa11.75□□□□□ -0.53
UBR5-203ENST00000518145 RUSC2Q8N2Y8 1516 aa11.74□□□□□ -0.53
UBR5-203ENST00000518145 ZNF608Q9ULD9 1512 aaPredicted RBP11.74□□□□□ -0.53
UBR5-203ENST00000518145 EIF4G3O43432 1585 aaKnown RBP11.71□□□□□ -0.53
UBR5-203ENST00000518145 SOGA1O94964 1423 aa11.69□□□□□ -0.54
UBR5-203ENST00000518145 DSG3P32926 999 aa11.68□□□□□ -0.54
UBR5-203ENST00000518145 IFT140Q96RY7 1462 aa11.68□□□□□ -0.54
UBR5-203ENST00000518145 PBRM1Q86U86 1689 aa11.66□□□□□ -0.54
UBR5-203ENST00000518145 AQRO60306 1485 aaKnown RBP eCLIP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms