RNA–Protein interactions for RNA: ENST00000517819.5

ITGB2-214, Transcript of integrin subunit beta 2, humanhuman

TSL 2

Gene ITGB2, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-214ENST00000517819 NISCHQ9Y2I1 1504 aa38.32■■■■□ 3.72
ITGB2-214ENST00000517819 CCDC180Q9P1Z9 1646 aa34.15■■■■□ 3.06
ITGB2-214ENST00000517819 ABCC9O60706 1549 aa33.66■■■□□ 2.98
ITGB2-214ENST00000517819 RB1CC1Q8TDY2 1594 aa32.25■■■□□ 2.75
ITGB2-214ENST00000517819 NACADO15069 1562 aa32.16■■■□□ 2.74
ITGB2-214ENST00000517819 DCAF8L2P0C7V8 631 aa32.05■■■□□ 2.72
ITGB2-214ENST00000517819 MYO15BQ96JP2 1530 aa31.9■■■□□ 2.7
ITGB2-214ENST00000517819 ZCCHC6Q5VYS8 1495 aaKnown RBP31.88■■■□□ 2.69
ITGB2-214ENST00000517819 DCAF1Q9Y4B6 1507 aa31.68■■■□□ 2.66
ITGB2-214ENST00000517819 UNC13AQ9UPW8 1703 aa31.56■■■□□ 2.64
ITGB2-214ENST00000517819 PABPN1Q86U42 306 aaKnown RBP eCLIP31.41■■■□□ 2.62
ITGB2-214ENST00000517819 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
ITGB2-214ENST00000517819 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
ITGB2-214ENST00000517819 DNAJC5BQ9UF47 199 aa31.14■■■□□ 2.58
ITGB2-214ENST00000517819 SHROOM4Q9ULL8 1493 aa30.93■■■□□ 2.54
ITGB2-214ENST00000517819 EIF4G1Q04637 1599 aaKnown RBP30.5■■■□□ 2.47
ITGB2-214ENST00000517819 CC2D2AQ9P2K1 1620 aa30.44■■■□□ 2.46
ITGB2-214ENST00000517819 CECR2Q9BXF3 1484 aa30.26■■■□□ 2.44
ITGB2-214ENST00000517819 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
ITGB2-214ENST00000517819 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
ITGB2-214ENST00000517819 NCAPD3P42695 1498 aa29.69■■■□□ 2.34
ITGB2-214ENST00000517819 ATAD2BQ9ULI0 1458 aa29.68■■■□□ 2.34
ITGB2-214ENST00000517819 SMARCA2P51531 1590 aa29.6■■■□□ 2.33
ITGB2-214ENST00000517819 MROH2BQ7Z745 1585 aa29.54■■■□□ 2.32
ITGB2-214ENST00000517819 HMGXB3Q12766 1538 aa29.52■■■□□ 2.32
ITGB2-214ENST00000517819 PEG3Q9GZU2 1588 aa29.51■■■□□ 2.31
ITGB2-214ENST00000517819 BAZ1BQ9UIG0 1483 aaKnown RBP29.41■■■□□ 2.3
ITGB2-214ENST00000517819 WIZO95785 1651 aa29.21■■■□□ 2.27
ITGB2-214ENST00000517819 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
ITGB2-214ENST00000517819 NESP48681 1621 aa29.08■■■□□ 2.25
ITGB2-214ENST00000517819 ERCC6Q03468 1493 aa28.99■■■□□ 2.23
ITGB2-214ENST00000517819 LAMC3Q9Y6N6 1575 aa28.94■■■□□ 2.22
ITGB2-214ENST00000517819 TOP2AP11388 1531 aaKnown RBP28.87■■■□□ 2.21
ITGB2-214ENST00000517819 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
ITGB2-214ENST00000517819 CUX2O14529 1486 aa28.79■■■□□ 2.2
ITGB2-214ENST00000517819 PDS5BQ9NTI5 1447 aa28.73■■■□□ 2.19
ITGB2-214ENST00000517819 KIF21AQ7Z4S6 1674 aa28.71■■■□□ 2.19
ITGB2-214ENST00000517819 THOC2Q8NI27 1593 aaKnown RBP28.69■■■□□ 2.18
ITGB2-214ENST00000517819 CFTRP13569 1480 aa28.59■■■□□ 2.17
ITGB2-214ENST00000517819 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
ITGB2-214ENST00000517819 FANCD2Q9BXW9 1451 aa28.48■■■□□ 2.15
ITGB2-214ENST00000517819 MRC2Q9UBG0 1479 aa28.47■■■□□ 2.15
ITGB2-214ENST00000517819 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
ITGB2-214ENST00000517819 WDR62O43379 1518 aa28.4■■■□□ 2.14
ITGB2-214ENST00000517819 PRDM2Q13029 1718 aa28.35■■■□□ 2.13
ITGB2-214ENST00000517819 URB2Q14146 1524 aaKnown RBP28.23■■■□□ 2.11
ITGB2-214ENST00000517819 DNAJC5Q9H3Z4 198 aa28.19■■■□□ 2.1
ITGB2-214ENST00000517819 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
ITGB2-214ENST00000517819 TOPBP1Q92547 1522 aa28.01■■■□□ 2.07
ITGB2-214ENST00000517819 ABCC8Q09428 1581 aa27.94■■■□□ 2.06
ITGB2-214ENST00000517819 DNMBPQ6XZF7 1577 aa27.94■■■□□ 2.06
ITGB2-214ENST00000517819 IFT140Q96RY7 1462 aa27.87■■■□□ 2.05
ITGB2-214ENST00000517819 ZNF608Q9ULD9 1512 aaPredicted RBP27.8■■■□□ 2.04
ITGB2-214ENST00000517819 POLA1P09884 1462 aaPredicted RBP27.76■■■□□ 2.03
ITGB2-214ENST00000517819 TARBP1Q13395 1621 aaKnown RBP27.73■■■□□ 2.03
ITGB2-214ENST00000517819 CUX1P39880 1505 aa27.72■■■□□ 2.03
ITGB2-214ENST00000517819 EIF4G3O43432 1585 aaKnown RBP27.67■■■□□ 2.02
ITGB2-214ENST00000517819 FGD5Q6ZNL6 1462 aa27.65■■■□□ 2.02
ITGB2-214ENST00000517819 RAD54L2Q9Y4B4 1467 aa27.64■■■□□ 2.02
ITGB2-214ENST00000517819 SOGA1O94964 1423 aa27.62■■■□□ 2.01
ITGB2-214ENST00000517819 AQRO60306 1485 aaKnown RBP eCLIP27.6■■■□□ 2.01
ITGB2-214ENST00000517819 OSCARQ8IYS5 282 aa27.53■■■□□ 2
ITGB2-214ENST00000517819 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
ITGB2-214ENST00000517819 WDR97A6NE52 1622 aa27.46■■□□□ 1.99
ITGB2-214ENST00000517819 WRNQ14191 1432 aaPredicted RBP eCLIP27.43■■□□□ 1.98
ITGB2-214ENST00000517819 BIVM-ERCC5R4GMW8 1640 aa27.41■■□□□ 1.98
ITGB2-214ENST00000517819 SYNJ1O43426 1573 aa27.41■■□□□ 1.98
ITGB2-214ENST00000517819 TOP2BQ02880 1626 aa27.41■■□□□ 1.98
ITGB2-214ENST00000517819 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
ITGB2-214ENST00000517819 CHD1O14646 1710 aa27.36■■□□□ 1.97
ITGB2-214ENST00000517819 SNAPC4Q5SXM2 1469 aa27.33■■□□□ 1.97
ITGB2-214ENST00000517819 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
ITGB2-214ENST00000517819 GAPVD1Q14C86 1478 aa27.3■■□□□ 1.96
ITGB2-214ENST00000517819 ABCA5Q8WWZ7 1642 aa27.3■■□□□ 1.96
ITGB2-214ENST00000517819 MAGI1Q96QZ7 1491 aaPredicted RBP27.28■■□□□ 1.96
ITGB2-214ENST00000517819 FBLN2P98095 1184 aa27.27■■□□□ 1.96
ITGB2-214ENST00000517819 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
ITGB2-214ENST00000517819 SYNJ2O15056 1496 aa27.19■■□□□ 1.94
ITGB2-214ENST00000517819 RIMBP3CA6NJZ7 1639 aa27.16■■□□□ 1.94
ITGB2-214ENST00000517819 RIMBP3BA6NNM3 1639 aa27.16■■□□□ 1.94
ITGB2-214ENST00000517819 RIMBP3Q9UFD9 1639 aa27.16■■□□□ 1.94
ITGB2-214ENST00000517819 CHMP7Q8WUX9 453 aaPredicted RBP27.16■■□□□ 1.94
ITGB2-214ENST00000517819 TRIM41Q8WV44 630 aa27.14■■□□□ 1.94
ITGB2-214ENST00000517819 ARHGEF11O15085 1522 aa27.13■■□□□ 1.93
ITGB2-214ENST00000517819 CLASP1Q7Z460 1538 aa27.08■■□□□ 1.93
ITGB2-214ENST00000517819 ADAMTS12P58397 1594 aa27.05■■□□□ 1.92
ITGB2-214ENST00000517819 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
ITGB2-214ENST00000517819 GRIN2AQ12879 1464 aa26.99■■□□□ 1.91
ITGB2-214ENST00000517819 FHAD1B1AJZ9 1412 aa26.98■■□□□ 1.91
ITGB2-214ENST00000517819 ARAP1Q96P48 1450 aa26.91■■□□□ 1.9
ITGB2-214ENST00000517819 CEP170Q5SW79 1584 aa26.89■■□□□ 1.9
ITGB2-214ENST00000517819 NUP160Q12769 1436 aa26.89■■□□□ 1.89
ITGB2-214ENST00000517819 CYB5RLQ6IPT4 315 aa26.86■■□□□ 1.89
ITGB2-214ENST00000517819 KIF27Q86VH2 1401 aa26.86■■□□□ 1.89
ITGB2-214ENST00000517819 IGF1RP08069 1367 aa26.81■■□□□ 1.88
ITGB2-214ENST00000517819 CUL7Q14999 1698 aa26.74■■□□□ 1.87
ITGB2-214ENST00000517819 SHROOM2Q13796 1616 aa26.72■■□□□ 1.87
ITGB2-214ENST00000517819 ERCC6L2Q5T890 1561 aa26.71■■□□□ 1.87
ITGB2-214ENST00000517819 RUSC2Q8N2Y8 1516 aa26.66■■□□□ 1.86
ITGB2-214ENST00000517819 CARMIL1Q5VZK9 1371 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms