RNA–Protein interactions for RNA: ENST00000517745.1

NDRG1-205, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-205ENST00000517745 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
NDRG1-205ENST00000517745 CCDC180Q9P1Z9 1646 aa32.08■■■□□ 2.73
NDRG1-205ENST00000517745 ABCC9O60706 1549 aa32.04■■■□□ 2.72
NDRG1-205ENST00000517745 RB1CC1Q8TDY2 1594 aa30.52■■■□□ 2.48
NDRG1-205ENST00000517745 NACADO15069 1562 aa30.3■■■□□ 2.44
NDRG1-205ENST00000517745 DCAF8L2P0C7V8 631 aa30.18■■■□□ 2.42
NDRG1-205ENST00000517745 DNAJC5BQ9UF47 199 aa29.9■■■□□ 2.38
NDRG1-205ENST00000517745 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
NDRG1-205ENST00000517745 PABPN1Q86U42 306 aaKnown RBP eCLIP29.81■■■□□ 2.36
NDRG1-205ENST00000517745 UNC13AQ9UPW8 1703 aa29.81■■■□□ 2.36
NDRG1-205ENST00000517745 ZCCHC6Q5VYS8 1495 aaKnown RBP29.64■■■□□ 2.34
NDRG1-205ENST00000517745 BICRAQ9NZM4 1560 aa29.57■■■□□ 2.32
NDRG1-205ENST00000517745 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
NDRG1-205ENST00000517745 SCRIBQ14160 1630 aa29.27■■■□□ 2.28
NDRG1-205ENST00000517745 SHROOM4Q9ULL8 1493 aa29.23■■■□□ 2.27
NDRG1-205ENST00000517745 CC2D2AQ9P2K1 1620 aa28.94■■■□□ 2.22
NDRG1-205ENST00000517745 EIF4G1Q04637 1599 aaKnown RBP28.88■■■□□ 2.21
NDRG1-205ENST00000517745 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
NDRG1-205ENST00000517745 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
NDRG1-205ENST00000517745 SMARCA4P51532 1647 aa27.89■■■□□ 2.06
NDRG1-205ENST00000517745 ATAD2BQ9ULI0 1458 aa27.88■■■□□ 2.05
NDRG1-205ENST00000517745 SMARCA2P51531 1590 aa27.84■■■□□ 2.05
NDRG1-205ENST00000517745 HMGXB3Q12766 1538 aa27.78■■■□□ 2.04
NDRG1-205ENST00000517745 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
NDRG1-205ENST00000517745 ERCC6Q03468 1493 aa27.7■■■□□ 2.03
NDRG1-205ENST00000517745 BAZ1BQ9UIG0 1483 aaKnown RBP27.66■■■□□ 2.02
NDRG1-205ENST00000517745 CUX2O14529 1486 aa27.59■■■□□ 2.01
NDRG1-205ENST00000517745 PEG3Q9GZU2 1588 aa27.58■■■□□ 2.01
NDRG1-205ENST00000517745 MROH2BQ7Z745 1585 aa27.53■■■□□ 2
NDRG1-205ENST00000517745 NESP48681 1621 aa27.52■■■□□ 2
NDRG1-205ENST00000517745 DNAJC5Q9H3Z4 198 aa27.45■■□□□ 1.98
NDRG1-205ENST00000517745 LAMC3Q9Y6N6 1575 aa27.35■■□□□ 1.97
NDRG1-205ENST00000517745 THOC2Q8NI27 1593 aaKnown RBP27.25■■□□□ 1.95
NDRG1-205ENST00000517745 WIZO95785 1651 aa27.23■■□□□ 1.95
NDRG1-205ENST00000517745 KIF21AQ7Z4S6 1674 aa27.19■■□□□ 1.94
NDRG1-205ENST00000517745 PDS5BQ9NTI5 1447 aa27.18■■□□□ 1.94
NDRG1-205ENST00000517745 CADPSQ9ULU8 1353 aa27.1■■□□□ 1.93
NDRG1-205ENST00000517745 RSF1Q96T23 1441 aaPredicted RBP26.97■■□□□ 1.91
NDRG1-205ENST00000517745 MRC2Q9UBG0 1479 aa26.96■■□□□ 1.91
NDRG1-205ENST00000517745 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
NDRG1-205ENST00000517745 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
NDRG1-205ENST00000517745 WDR62O43379 1518 aa26.88■■□□□ 1.89
NDRG1-205ENST00000517745 FANCD2Q9BXW9 1451 aa26.83■■□□□ 1.89
NDRG1-205ENST00000517745 CFTRP13569 1480 aa26.81■■□□□ 1.88
NDRG1-205ENST00000517745 PRDM2Q13029 1718 aa26.6■■□□□ 1.85
NDRG1-205ENST00000517745 URB2Q14146 1524 aaKnown RBP26.59■■□□□ 1.85
NDRG1-205ENST00000517745 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
NDRG1-205ENST00000517745 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
NDRG1-205ENST00000517745 IFT140Q96RY7 1462 aa26.32■■□□□ 1.8
NDRG1-205ENST00000517745 TOPBP1Q92547 1522 aa26.32■■□□□ 1.8
NDRG1-205ENST00000517745 OSCARQ8IYS5 282 aa26.31■■□□□ 1.8
NDRG1-205ENST00000517745 ABCC8Q09428 1581 aa26.26■■□□□ 1.79
NDRG1-205ENST00000517745 ZNF608Q9ULD9 1512 aaPredicted RBP26.25■■□□□ 1.79
NDRG1-205ENST00000517745 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
NDRG1-205ENST00000517745 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
NDRG1-205ENST00000517745 TARBP1Q13395 1621 aaKnown RBP26.06■■□□□ 1.76
NDRG1-205ENST00000517745 POLA1P09884 1462 aaPredicted RBP26.05■■□□□ 1.76
NDRG1-205ENST00000517745 AQRO60306 1485 aaKnown RBP eCLIP26.02■■□□□ 1.769e-8■■■□□ 15.1
NDRG1-205ENST00000517745 RIMBP3CA6NJZ7 1639 aa26■■□□□ 1.75
NDRG1-205ENST00000517745 RIMBP3BA6NNM3 1639 aa26■■□□□ 1.75
NDRG1-205ENST00000517745 RIMBP3Q9UFD9 1639 aa26■■□□□ 1.75
NDRG1-205ENST00000517745 CHD1O14646 1710 aa25.95■■□□□ 1.74
NDRG1-205ENST00000517745 RAD54L2Q9Y4B4 1467 aa25.95■■□□□ 1.74
NDRG1-205ENST00000517745 SOGA1O94964 1423 aa25.93■■□□□ 1.74
NDRG1-205ENST00000517745 ARHGEF11O15085 1522 aa25.92■■□□□ 1.74
NDRG1-205ENST00000517745 FGD5Q6ZNL6 1462 aa25.91■■□□□ 1.74
NDRG1-205ENST00000517745 FBLN2P98095 1184 aa25.88■■□□□ 1.73
NDRG1-205ENST00000517745 CUX1P39880 1505 aa25.88■■□□□ 1.73
NDRG1-205ENST00000517745 TDRD9Q8NDG6 1382 aaKnown RBP25.87■■□□□ 1.73
NDRG1-205ENST00000517745 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
NDRG1-205ENST00000517745 WDR97A6NE52 1622 aa25.84■■□□□ 1.73
NDRG1-205ENST00000517745 SNAPC4Q5SXM2 1469 aa25.8■■□□□ 1.72
NDRG1-205ENST00000517745 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
NDRG1-205ENST00000517745 MAGI1Q96QZ7 1491 aaPredicted RBP25.72■■□□□ 1.71
NDRG1-205ENST00000517745 CYB5RLQ6IPT4 315 aa25.7■■□□□ 1.7
NDRG1-205ENST00000517745 CHMP7Q8WUX9 453 aaPredicted RBP25.68■■□□□ 1.7
NDRG1-205ENST00000517745 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
NDRG1-205ENST00000517745 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
NDRG1-205ENST00000517745 PBRM1Q86U86 1689 aa25.65■■□□□ 1.7
NDRG1-205ENST00000517745 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
NDRG1-205ENST00000517745 SYNJ2O15056 1496 aa25.62■■□□□ 1.69
NDRG1-205ENST00000517745 CLASP1Q7Z460 1538 aa25.62■■□□□ 1.69
NDRG1-205ENST00000517745 ABCA10Q8WWZ4 1543 aa25.6■■□□□ 1.69
NDRG1-205ENST00000517745 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
NDRG1-205ENST00000517745 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.68
NDRG1-205ENST00000517745 BIVM-ERCC5R4GMW8 1640 aa25.49■■□□□ 1.67
NDRG1-205ENST00000517745 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
NDRG1-205ENST00000517745 TRHP20396 242 aaPredicted RBP25.45■■□□□ 1.66
NDRG1-205ENST00000517745 ADAMTS12P58397 1594 aa25.4■■□□□ 1.66
NDRG1-205ENST00000517745 GRIN2AQ12879 1464 aa25.39■■□□□ 1.65
NDRG1-205ENST00000517745 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
NDRG1-205ENST00000517745 CEP170Q5SW79 1584 aa25.3■■□□□ 1.64
NDRG1-205ENST00000517745 ERICH3Q5RHP9 1530 aa25.29■■□□□ 1.64
NDRG1-205ENST00000517745 NUP160Q12769 1436 aa25.28■■□□□ 1.64
NDRG1-205ENST00000517745 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
NDRG1-205ENST00000517745 SHROOM2Q13796 1616 aa25.16■■□□□ 1.62
NDRG1-205ENST00000517745 PRG4Q92954 1404 aaPredicted RBP25.04■■□□□ 1.6
NDRG1-205ENST00000517745 RUSC2Q8N2Y8 1516 aa25.04■■□□□ 1.6
NDRG1-205ENST00000517745 JPH4Q96JJ6 628 aa25■■□□□ 1.59
NDRG1-205ENST00000517745 KIF27Q86VH2 1401 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms