RNA–Protein interactions for RNA: ENST00000517563.5

ITGB2-213, Transcript of integrin subunit beta 2, humanhuman

TSL 4

Gene ITGB2, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-213ENST00000517563 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
ITGB2-213ENST00000517563 CCDC180Q9P1Z9 1646 aa29.93■■■□□ 2.38
ITGB2-213ENST00000517563 ABCC9O60706 1549 aa29.42■■■□□ 2.3
ITGB2-213ENST00000517563 DCAF8L2P0C7V8 631 aa28.38■■■□□ 2.13
ITGB2-213ENST00000517563 RB1CC1Q8TDY2 1594 aa28.25■■■□□ 2.11
ITGB2-213ENST00000517563 NACADO15069 1562 aa28.23■■■□□ 2.11
ITGB2-213ENST00000517563 ZCCHC6Q5VYS8 1495 aaKnown RBP28.1■■■□□ 2.09
ITGB2-213ENST00000517563 MYO15BQ96JP2 1530 aa28.07■■■□□ 2.08
ITGB2-213ENST00000517563 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
ITGB2-213ENST00000517563 PABPN1Q86U42 306 aaKnown RBP eCLIP27.58■■■□□ 2.01
ITGB2-213ENST00000517563 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
ITGB2-213ENST00000517563 BICRAQ9NZM4 1560 aa27.39■■□□□ 1.98
ITGB2-213ENST00000517563 SCRIBQ14160 1630 aa27.35■■□□□ 1.97
ITGB2-213ENST00000517563 DNAJC5BQ9UF47 199 aa27.13■■□□□ 1.93
ITGB2-213ENST00000517563 SHROOM4Q9ULL8 1493 aa27.09■■□□□ 1.93
ITGB2-213ENST00000517563 EIF4G1Q04637 1599 aaKnown RBP26.67■■□□□ 1.86
ITGB2-213ENST00000517563 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
ITGB2-213ENST00000517563 CECR2Q9BXF3 1484 aa26.44■■□□□ 1.82
ITGB2-213ENST00000517563 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
ITGB2-213ENST00000517563 BAZ1AQ9NRL2 1556 aaPredicted RBP26.16■■□□□ 1.78
ITGB2-213ENST00000517563 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
ITGB2-213ENST00000517563 ATAD2BQ9ULI0 1458 aa26.1■■□□□ 1.77
ITGB2-213ENST00000517563 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
ITGB2-213ENST00000517563 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
ITGB2-213ENST00000517563 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
ITGB2-213ENST00000517563 HMGXB3Q12766 1538 aa25.89■■□□□ 1.74
ITGB2-213ENST00000517563 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
ITGB2-213ENST00000517563 RSF1Q96T23 1441 aaPredicted RBP25.77■■□□□ 1.72
ITGB2-213ENST00000517563 WIZO95785 1651 aa25.71■■□□□ 1.71
ITGB2-213ENST00000517563 NESP48681 1621 aa25.45■■□□□ 1.67
ITGB2-213ENST00000517563 TOP2AP11388 1531 aaKnown RBP25.44■■□□□ 1.66
ITGB2-213ENST00000517563 CADPSQ9ULU8 1353 aa25.36■■□□□ 1.65
ITGB2-213ENST00000517563 ERCC6Q03468 1493 aa25.35■■□□□ 1.65
ITGB2-213ENST00000517563 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
ITGB2-213ENST00000517563 PDS5BQ9NTI5 1447 aa25.25■■□□□ 1.63
ITGB2-213ENST00000517563 CCDC88BA6NC98 1476 aa25.21■■□□□ 1.63
ITGB2-213ENST00000517563 SUPT5HO00267 1087 aaKnown RBP25.18■■□□□ 1.62
ITGB2-213ENST00000517563 CFTRP13569 1480 aa25.17■■□□□ 1.62
ITGB2-213ENST00000517563 CUX2O14529 1486 aa25.08■■□□□ 1.6
ITGB2-213ENST00000517563 KIF21AQ7Z4S6 1674 aa25.05■■□□□ 1.6
ITGB2-213ENST00000517563 FANCD2Q9BXW9 1451 aa25.02■■□□□ 1.6
ITGB2-213ENST00000517563 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
ITGB2-213ENST00000517563 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
ITGB2-213ENST00000517563 MRC2Q9UBG0 1479 aa24.94■■□□□ 1.58
ITGB2-213ENST00000517563 WDR62O43379 1518 aa24.82■■□□□ 1.56
ITGB2-213ENST00000517563 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
ITGB2-213ENST00000517563 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
ITGB2-213ENST00000517563 ABCC8Q09428 1581 aa24.63■■□□□ 1.53
ITGB2-213ENST00000517563 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
ITGB2-213ENST00000517563 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
ITGB2-213ENST00000517563 IFT140Q96RY7 1462 aa24.47■■□□□ 1.51
ITGB2-213ENST00000517563 DNAJC5Q9H3Z4 198 aa24.46■■□□□ 1.51
ITGB2-213ENST00000517563 CUX1P39880 1505 aa24.4■■□□□ 1.5
ITGB2-213ENST00000517563 POLA1P09884 1462 aaPredicted RBP24.4■■□□□ 1.5
ITGB2-213ENST00000517563 SOGA1O94964 1423 aa24.36■■□□□ 1.49
ITGB2-213ENST00000517563 ZNF608Q9ULD9 1512 aaPredicted RBP24.36■■□□□ 1.49
ITGB2-213ENST00000517563 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
ITGB2-213ENST00000517563 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
ITGB2-213ENST00000517563 TARBP1Q13395 1621 aaKnown RBP24.31■■□□□ 1.48
ITGB2-213ENST00000517563 WRNQ14191 1432 aaPredicted RBP eCLIP24.28■■□□□ 1.48
ITGB2-213ENST00000517563 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.47
ITGB2-213ENST00000517563 TDRD9Q8NDG6 1382 aaKnown RBP24.24■■□□□ 1.47
ITGB2-213ENST00000517563 TOP2BQ02880 1626 aa24.18■■□□□ 1.46
ITGB2-213ENST00000517563 EIF4G3O43432 1585 aaKnown RBP24.18■■□□□ 1.46
ITGB2-213ENST00000517563 OSCARQ8IYS5 282 aa24.17■■□□□ 1.46
ITGB2-213ENST00000517563 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
ITGB2-213ENST00000517563 BIVM-ERCC5R4GMW8 1640 aa24.13■■□□□ 1.45
ITGB2-213ENST00000517563 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
ITGB2-213ENST00000517563 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
ITGB2-213ENST00000517563 GRIN2BQ13224 1484 aa24.04■■□□□ 1.44
ITGB2-213ENST00000517563 GAPVD1Q14C86 1478 aa24.04■■□□□ 1.44
ITGB2-213ENST00000517563 FBLN2P98095 1184 aa24.03■■□□□ 1.44
ITGB2-213ENST00000517563 SNAPC4Q5SXM2 1469 aa23.98■■□□□ 1.43
ITGB2-213ENST00000517563 CHMP7Q8WUX9 453 aaPredicted RBP23.96■■□□□ 1.43
ITGB2-213ENST00000517563 MAGI1Q96QZ7 1491 aaPredicted RBP23.95■■□□□ 1.42
ITGB2-213ENST00000517563 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
ITGB2-213ENST00000517563 CHD1O14646 1710 aa23.87■■□□□ 1.41
ITGB2-213ENST00000517563 SYNJ2O15056 1496 aa23.87■■□□□ 1.41
ITGB2-213ENST00000517563 PBRM1Q86U86 1689 aa23.86■■□□□ 1.41
ITGB2-213ENST00000517563 ERICH3Q5RHP9 1530 aa23.8■■□□□ 1.4
ITGB2-213ENST00000517563 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
ITGB2-213ENST00000517563 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
ITGB2-213ENST00000517563 FHAD1B1AJZ9 1412 aa23.77■■□□□ 1.4
ITGB2-213ENST00000517563 IGF1RP08069 1367 aa23.75■■□□□ 1.39
ITGB2-213ENST00000517563 ADAMTS12P58397 1594 aa23.71■■□□□ 1.39
ITGB2-213ENST00000517563 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
ITGB2-213ENST00000517563 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
ITGB2-213ENST00000517563 ARHGEF11O15085 1522 aa23.64■■□□□ 1.38
ITGB2-213ENST00000517563 NUP160Q12769 1436 aa23.62■■□□□ 1.37
ITGB2-213ENST00000517563 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
ITGB2-213ENST00000517563 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
ITGB2-213ENST00000517563 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
ITGB2-213ENST00000517563 CARMIL1Q5VZK9 1371 aa23.59■■□□□ 1.37
ITGB2-213ENST00000517563 RUSC2Q8N2Y8 1516 aa23.57■■□□□ 1.36
ITGB2-213ENST00000517563 CEP170Q5SW79 1584 aa23.56■■□□□ 1.36
ITGB2-213ENST00000517563 CYB5RLQ6IPT4 315 aa23.55■■□□□ 1.36
ITGB2-213ENST00000517563 CUL7Q14999 1698 aa23.53■■□□□ 1.36
ITGB2-213ENST00000517563 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
ITGB2-213ENST00000517563 JPH4Q96JJ6 628 aa23.49■■□□□ 1.35
ITGB2-213ENST00000517563 ARAP1Q96P48 1450 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms