RNA–Protein interactions for RNA: ENST00000517479.1

CDK16-209, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-209ENST00000517479 NISCHQ9Y2I1 1504 aa36.22■■■■□ 3.39
CDK16-209ENST00000517479 CCDC180Q9P1Z9 1646 aa32.35■■■□□ 2.77
CDK16-209ENST00000517479 ABCC9O60706 1549 aa31.94■■■□□ 2.7
CDK16-209ENST00000517479 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
CDK16-209ENST00000517479 NACADO15069 1562 aa30.41■■■□□ 2.46
CDK16-209ENST00000517479 DCAF8L2P0C7V8 631 aa30.34■■■□□ 2.45
CDK16-209ENST00000517479 ZCCHC6Q5VYS8 1495 aaKnown RBP30.12■■■□□ 2.41
CDK16-209ENST00000517479 MYO15BQ96JP2 1530 aa30.08■■■□□ 2.41
CDK16-209ENST00000517479 UNC13AQ9UPW8 1703 aa30.06■■■□□ 2.4
CDK16-209ENST00000517479 DCAF1Q9Y4B6 1507 aa29.89■■■□□ 2.38
CDK16-209ENST00000517479 PABPN1Q86U42 306 aaKnown RBP eCLIP29.78■■■□□ 2.36
CDK16-209ENST00000517479 BICRAQ9NZM4 1560 aa29.73■■■□□ 2.35
CDK16-209ENST00000517479 DNAJC5BQ9UF47 199 aa29.58■■■□□ 2.33
CDK16-209ENST00000517479 SCRIBQ14160 1630 aa29.56■■■□□ 2.32
CDK16-209ENST00000517479 SHROOM4Q9ULL8 1493 aa29.18■■■□□ 2.26
CDK16-209ENST00000517479 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
CDK16-209ENST00000517479 CC2D2AQ9P2K1 1620 aa28.9■■■□□ 2.22
CDK16-209ENST00000517479 CECR2Q9BXF3 1484 aa28.67■■■□□ 2.18
CDK16-209ENST00000517479 SMARCA4P51532 1647 aa28.21■■■□□ 2.11
CDK16-209ENST00000517479 ATAD2BQ9ULI0 1458 aa28.08■■■□□ 2.09
CDK16-209ENST00000517479 BAZ1AQ9NRL2 1556 aaPredicted RBP28.07■■■□□ 2.08
CDK16-209ENST00000517479 NCAPD3P42695 1498 aa28.05■■■□□ 2.08
CDK16-209ENST00000517479 SMARCA2P51531 1590 aa27.99■■■□□ 2.07
CDK16-209ENST00000517479 MROH2BQ7Z745 1585 aa27.97■■■□□ 2.07
CDK16-209ENST00000517479 HMGXB3Q12766 1538 aa27.92■■■□□ 2.06
CDK16-209ENST00000517479 PEG3Q9GZU2 1588 aa27.89■■■□□ 2.05
CDK16-209ENST00000517479 BAZ1BQ9UIG0 1483 aaKnown RBP27.82■■■□□ 2.04
CDK16-209ENST00000517479 WIZO95785 1651 aa27.71■■■□□ 2.03
CDK16-209ENST00000517479 NESP48681 1621 aa27.6■■■□□ 2.01
CDK16-209ENST00000517479 RSF1Q96T23 1441 aaPredicted RBP27.49■■□□□ 1.99
CDK16-209ENST00000517479 ERCC6Q03468 1493 aa27.48■■□□□ 1.99
CDK16-209ENST00000517479 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.98
CDK16-209ENST00000517479 KIF21AQ7Z4S6 1674 aa27.33■■□□□ 1.97
CDK16-209ENST00000517479 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
CDK16-209ENST00000517479 CUX2O14529 1486 aa27.25■■□□□ 1.95
CDK16-209ENST00000517479 THOC2Q8NI27 1593 aaKnown RBP27.25■■□□□ 1.95
CDK16-209ENST00000517479 CADPSQ9ULU8 1353 aa27.21■■□□□ 1.95
CDK16-209ENST00000517479 PDS5BQ9NTI5 1447 aa27.14■■□□□ 1.93
CDK16-209ENST00000517479 CFTRP13569 1480 aa27.02■■□□□ 1.92
CDK16-209ENST00000517479 CCDC88BA6NC98 1476 aa26.98■■□□□ 1.91
CDK16-209ENST00000517479 FANCD2Q9BXW9 1451 aa26.95■■□□□ 1.91
CDK16-209ENST00000517479 MRC2Q9UBG0 1479 aa26.95■■□□□ 1.91
CDK16-209ENST00000517479 PRDM2Q13029 1718 aa26.94■■□□□ 1.9
CDK16-209ENST00000517479 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
CDK16-209ENST00000517479 WDR62O43379 1518 aa26.9■■□□□ 1.9
CDK16-209ENST00000517479 URB2Q14146 1524 aaKnown RBP26.75■■□□□ 1.87
CDK16-209ENST00000517479 DNAJC5Q9H3Z4 198 aa26.73■■□□□ 1.87
CDK16-209ENST00000517479 SUPT5HO00267 1087 aaKnown RBP26.58■■□□□ 1.85
CDK16-209ENST00000517479 TOPBP1Q92547 1522 aa26.51■■□□□ 1.83
CDK16-209ENST00000517479 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
CDK16-209ENST00000517479 ABCC8Q09428 1581 aa26.37■■□□□ 1.81
CDK16-209ENST00000517479 ZNF608Q9ULD9 1512 aaPredicted RBP26.36■■□□□ 1.81
CDK16-209ENST00000517479 IFT140Q96RY7 1462 aa26.35■■□□□ 1.81
CDK16-209ENST00000517479 TARBP1Q13395 1621 aaKnown RBP26.29■■□□□ 1.8
CDK16-209ENST00000517479 POLA1P09884 1462 aaPredicted RBP26.27■■□□□ 1.8
CDK16-209ENST00000517479 EIF4G3O43432 1585 aaKnown RBP26.26■■□□□ 1.79
CDK16-209ENST00000517479 CUX1P39880 1505 aa26.25■■□□□ 1.79
CDK16-209ENST00000517479 RAD54L2Q9Y4B4 1467 aa26.19■■□□□ 1.78
CDK16-209ENST00000517479 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
CDK16-209ENST00000517479 AQRO60306 1485 aaKnown RBP eCLIP26.14■■□□□ 1.783e-10■■■■■ 43
CDK16-209ENST00000517479 SOGA1O94964 1423 aa26.1■■□□□ 1.77
CDK16-209ENST00000517479 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
CDK16-209ENST00000517479 CHD1O14646 1710 aa26.04■■□□□ 1.76
CDK16-209ENST00000517479 OSCARQ8IYS5 282 aa26.03■■□□□ 1.76
CDK16-209ENST00000517479 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
CDK16-209ENST00000517479 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
CDK16-209ENST00000517479 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
CDK16-209ENST00000517479 TOP2BQ02880 1626 aa25.92■■□□□ 1.74
CDK16-209ENST00000517479 PBRM1Q86U86 1689 aa25.91■■□□□ 1.74
CDK16-209ENST00000517479 WRNQ14191 1432 aaPredicted RBP eCLIP25.9■■□□□ 1.74
CDK16-209ENST00000517479 SNAPC4Q5SXM2 1469 aa25.89■■□□□ 1.73
CDK16-209ENST00000517479 ABCA5Q8WWZ7 1642 aa25.86■■□□□ 1.73
CDK16-209ENST00000517479 ABCA10Q8WWZ4 1543 aa25.86■■□□□ 1.73
CDK16-209ENST00000517479 GRIN2BQ13224 1484 aa25.83■■□□□ 1.73
CDK16-209ENST00000517479 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
CDK16-209ENST00000517479 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
CDK16-209ENST00000517479 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
CDK16-209ENST00000517479 FBLN2P98095 1184 aa25.82■■□□□ 1.72
CDK16-209ENST00000517479 GAPVD1Q14C86 1478 aa25.82■■□□□ 1.72
CDK16-209ENST00000517479 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
CDK16-209ENST00000517479 MAGI1Q96QZ7 1491 aaPredicted RBP25.78■■□□□ 1.72
CDK16-209ENST00000517479 ARHGEF11O15085 1522 aa25.74■■□□□ 1.71
CDK16-209ENST00000517479 SYNJ2O15056 1496 aa25.7■■□□□ 1.7
CDK16-209ENST00000517479 CLASP1Q7Z460 1538 aa25.67■■□□□ 1.7
CDK16-209ENST00000517479 CHMP7Q8WUX9 453 aaPredicted RBP25.66■■□□□ 1.7
CDK16-209ENST00000517479 ADAMTS12P58397 1594 aa25.63■■□□□ 1.69
CDK16-209ENST00000517479 ERICH3Q5RHP9 1530 aa25.54■■□□□ 1.68
CDK16-209ENST00000517479 GRIN2AQ12879 1464 aa25.53■■□□□ 1.68
CDK16-209ENST00000517479 ARAP1Q96P48 1450 aa25.53■■□□□ 1.68
CDK16-209ENST00000517479 CEP170Q5SW79 1584 aa25.49■■□□□ 1.67
CDK16-209ENST00000517479 FHAD1B1AJZ9 1412 aa25.47■■□□□ 1.67
CDK16-209ENST00000517479 CYB5RLQ6IPT4 315 aa25.45■■□□□ 1.66
CDK16-209ENST00000517479 NUP160Q12769 1436 aa25.42■■□□□ 1.66
CDK16-209ENST00000517479 ERCC6L2Q5T890 1561 aa25.37■■□□□ 1.65
CDK16-209ENST00000517479 KIF27Q86VH2 1401 aa25.34■■□□□ 1.65
CDK16-209ENST00000517479 SHROOM2Q13796 1616 aa25.32■■□□□ 1.64
CDK16-209ENST00000517479 IGF1RP08069 1367 aa25.3■■□□□ 1.64
CDK16-209ENST00000517479 CUL7Q14999 1698 aa25.29■■□□□ 1.64
CDK16-209ENST00000517479 RUSC2Q8N2Y8 1516 aa25.27■■□□□ 1.64
CDK16-209ENST00000517479 CARMIL1Q5VZK9 1371 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms