RNA–Protein interactions for RNA: ENST00000517426.5

CDK16-208, Transcript of cyclin dependent kinase 16, humanhuman

TSL 5

Gene CDK16, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-208ENST00000517426 NISCHQ9Y2I1 1504 aa46.92■■■■■ 5.1
CDK16-208ENST00000517426 CCDC180Q9P1Z9 1646 aa41.8■■■■■ 4.28
CDK16-208ENST00000517426 ABCC9O60706 1549 aa41.61■■■■■ 4.25
CDK16-208ENST00000517426 RB1CC1Q8TDY2 1594 aa39.68■■■■□ 3.94
CDK16-208ENST00000517426 DCAF8L2P0C7V8 631 aa39.6■■■■□ 3.93
CDK16-208ENST00000517426 NACADO15069 1562 aa39.52■■■■□ 3.92
CDK16-208ENST00000517426 MYO15BQ96JP2 1530 aa39.09■■■■□ 3.85
CDK16-208ENST00000517426 ZCCHC6Q5VYS8 1495 aaKnown RBP38.96■■■■□ 3.83
CDK16-208ENST00000517426 PABPN1Q86U42 306 aaKnown RBP eCLIP38.88■■■■□ 3.813e-6■■□□□ 11.9
CDK16-208ENST00000517426 DNAJC5BQ9UF47 199 aa38.76■■■■□ 3.8
CDK16-208ENST00000517426 DCAF1Q9Y4B6 1507 aa38.74■■■■□ 3.79
CDK16-208ENST00000517426 UNC13AQ9UPW8 1703 aa38.65■■■■□ 3.78
CDK16-208ENST00000517426 BICRAQ9NZM4 1560 aa38.52■■■■□ 3.76
CDK16-208ENST00000517426 SCRIBQ14160 1630 aa38.22■■■■□ 3.71
CDK16-208ENST00000517426 SHROOM4Q9ULL8 1493 aa38.02■■■■□ 3.68
CDK16-208ENST00000517426 EIF4G1Q04637 1599 aaKnown RBP37.56■■■■□ 3.6
CDK16-208ENST00000517426 CC2D2AQ9P2K1 1620 aa37.53■■■■□ 3.6
CDK16-208ENST00000517426 CECR2Q9BXF3 1484 aa37.44■■■■□ 3.58
CDK16-208ENST00000517426 NCAPD3P42695 1498 aa36.53■■■■□ 3.44
CDK16-208ENST00000517426 ATAD2BQ9ULI0 1458 aa36.49■■■■□ 3.43
CDK16-208ENST00000517426 SMARCA4P51532 1647 aa36.47■■■■□ 3.43
CDK16-208ENST00000517426 BAZ1AQ9NRL2 1556 aaPredicted RBP36.37■■■■□ 3.41
CDK16-208ENST00000517426 SMARCA2P51531 1590 aa36.36■■■■□ 3.41
CDK16-208ENST00000517426 HMGXB3Q12766 1538 aa36.24■■■■□ 3.39
CDK16-208ENST00000517426 MROH2BQ7Z745 1585 aa36.17■■■■□ 3.38
CDK16-208ENST00000517426 BAZ1BQ9UIG0 1483 aaKnown RBP36.15■■■■□ 3.38
CDK16-208ENST00000517426 PEG3Q9GZU2 1588 aa36.11■■■■□ 3.37
CDK16-208ENST00000517426 ERCC6Q03468 1493 aa35.9■■■■□ 3.34
CDK16-208ENST00000517426 NESP48681 1621 aa35.85■■■■□ 3.33
CDK16-208ENST00000517426 WIZO95785 1651 aa35.7■■■■□ 3.3
CDK16-208ENST00000517426 CUX2O14529 1486 aa35.64■■■■□ 3.3
CDK16-208ENST00000517426 RSF1Q96T23 1441 aaPredicted RBP35.61■■■■□ 3.29
CDK16-208ENST00000517426 LAMC3Q9Y6N6 1575 aa35.57■■■■□ 3.28
CDK16-208ENST00000517426 CADPSQ9ULU8 1353 aa35.48■■■■□ 3.27
CDK16-208ENST00000517426 PDS5BQ9NTI5 1447 aa35.45■■■■□ 3.27
CDK16-208ENST00000517426 THOC2Q8NI27 1593 aaKnown RBP35.31■■■■□ 3.24
CDK16-208ENST00000517426 TOP2AP11388 1531 aaKnown RBP35.3■■■■□ 3.24
CDK16-208ENST00000517426 DNAJC5Q9H3Z4 198 aa35.28■■■■□ 3.24
CDK16-208ENST00000517426 KIF21AQ7Z4S6 1674 aa35.27■■■■□ 3.24
CDK16-208ENST00000517426 CFTRP13569 1480 aa35.13■■■■□ 3.21
CDK16-208ENST00000517426 MRC2Q9UBG0 1479 aa35.09■■■■□ 3.21
CDK16-208ENST00000517426 FANCD2Q9BXW9 1451 aa35.04■■■■□ 3.2
CDK16-208ENST00000517426 CEP164Q9UPV0 1460 aa35.02■■■■□ 3.2
CDK16-208ENST00000517426 CCDC88BA6NC98 1476 aa34.96■■■■□ 3.19
CDK16-208ENST00000517426 WDR62O43379 1518 aa34.96■■■■□ 3.19
CDK16-208ENST00000517426 URB2Q14146 1524 aaKnown RBP34.72■■■■□ 3.15
CDK16-208ENST00000517426 PRDM2Q13029 1718 aa34.57■■■■□ 3.12
CDK16-208ENST00000517426 SUPT5HO00267 1087 aaKnown RBP34.42■■■■□ 3.1
CDK16-208ENST00000517426 TOPBP1Q92547 1522 aa34.41■■■■□ 3.1
CDK16-208ENST00000517426 ABCC8Q09428 1581 aa34.34■■■■□ 3.09
CDK16-208ENST00000517426 IFT140Q96RY7 1462 aa34.32■■■■□ 3.09
CDK16-208ENST00000517426 DNMBPQ6XZF7 1577 aa34.28■■■■□ 3.08
CDK16-208ENST00000517426 ZNF608Q9ULD9 1512 aaPredicted RBP34.25■■■■□ 3.07
CDK16-208ENST00000517426 OSCARQ8IYS5 282 aa34.18■■■■□ 3.06
CDK16-208ENST00000517426 POLA1P09884 1462 aaPredicted RBP34.09■■■■□ 3.05
CDK16-208ENST00000517426 TARBP1Q13395 1621 aaKnown RBP34.03■■■■□ 3.04
CDK16-208ENST00000517426 AQRO60306 1485 aaKnown RBP eCLIP34.02■■■■□ 3.043e-7■■■■■ 33.1
CDK16-208ENST00000517426 EIF4G3O43432 1585 aaKnown RBP34■■■■□ 3.03
CDK16-208ENST00000517426 RAD54L2Q9Y4B4 1467 aa33.99■■■■□ 3.03
CDK16-208ENST00000517426 SOGA1O94964 1423 aa33.98■■■■□ 3.03
CDK16-208ENST00000517426 CUX1P39880 1505 aa33.96■■■■□ 3.03
CDK16-208ENST00000517426 FGD5Q6ZNL6 1462 aa33.94■■■■□ 3.02
CDK16-208ENST00000517426 TRIM41Q8WV44 630 aa33.94■■■■□ 3.02
CDK16-208ENST00000517426 TDRD9Q8NDG6 1382 aaKnown RBP33.9■■■■□ 3.02
CDK16-208ENST00000517426 FBLN2P98095 1184 aa33.78■■■■□ 3
CDK16-208ENST00000517426 WDR97A6NE52 1622 aa33.65■■■□□ 2.98
CDK16-208ENST00000517426 SNAPC4Q5SXM2 1469 aa33.64■■■□□ 2.98
CDK16-208ENST00000517426 GRIN2BQ13224 1484 aa33.61■■■□□ 2.97
CDK16-208ENST00000517426 CHD1O14646 1710 aa33.61■■■□□ 2.97
CDK16-208ENST00000517426 WRNQ14191 1432 aaPredicted RBP eCLIP33.58■■■□□ 2.97
CDK16-208ENST00000517426 CHMP7Q8WUX9 453 aaPredicted RBP33.57■■■□□ 2.96
CDK16-208ENST00000517426 ABCA10Q8WWZ4 1543 aa33.56■■■□□ 2.96
CDK16-208ENST00000517426 RIMBP3CA6NJZ7 1639 aa33.56■■■□□ 2.96
CDK16-208ENST00000517426 RIMBP3BA6NNM3 1639 aa33.56■■■□□ 2.96
CDK16-208ENST00000517426 RIMBP3Q9UFD9 1639 aa33.56■■■□□ 2.96
CDK16-208ENST00000517426 GAPVD1Q14C86 1478 aa33.55■■■□□ 2.96
CDK16-208ENST00000517426 MAGI1Q96QZ7 1491 aaPredicted RBP33.55■■■□□ 2.96
CDK16-208ENST00000517426 ARHGEF11O15085 1522 aa33.55■■■□□ 2.96
CDK16-208ENST00000517426 SYNJ1O43426 1573 aa33.47■■■□□ 2.95
CDK16-208ENST00000517426 TOP2BQ02880 1626 aa33.47■■■□□ 2.95
CDK16-208ENST00000517426 SYNJ2O15056 1496 aa33.46■■■□□ 2.95
CDK16-208ENST00000517426 BIVM-ERCC5R4GMW8 1640 aa33.42■■■□□ 2.94
CDK16-208ENST00000517426 ABCA5Q8WWZ7 1642 aa33.42■■■□□ 2.94
CDK16-208ENST00000517426 CYB5RLQ6IPT4 315 aa33.38■■■□□ 2.93
CDK16-208ENST00000517426 PBRM1Q86U86 1689 aa33.36■■■□□ 2.93
CDK16-208ENST00000517426 CLASP1Q7Z460 1538 aa33.31■■■□□ 2.92
CDK16-208ENST00000517426 ARAP1Q96P48 1450 aa33.26■■■□□ 2.91
CDK16-208ENST00000517426 GRIN2AQ12879 1464 aa33.17■■■□□ 2.9
CDK16-208ENST00000517426 ADAMTS12P58397 1594 aa33.15■■■□□ 2.9
CDK16-208ENST00000517426 FHAD1B1AJZ9 1412 aa33.14■■■□□ 2.9
CDK16-208ENST00000517426 ERICH3Q5RHP9 1530 aa33.12■■■□□ 2.89
CDK16-208ENST00000517426 NUP160Q12769 1436 aa33.05■■■□□ 2.88
CDK16-208ENST00000517426 CEP170Q5SW79 1584 aa33■■■□□ 2.87
CDK16-208ENST00000517426 KIF27Q86VH2 1401 aa32.92■■■□□ 2.86
CDK16-208ENST00000517426 IGF1RP08069 1367 aa32.89■■■□□ 2.86
CDK16-208ENST00000517426 TRHP20396 242 aaPredicted RBP32.89■■■□□ 2.86
CDK16-208ENST00000517426 ERCC6L2Q5T890 1561 aa32.86■■■□□ 2.85
CDK16-208ENST00000517426 JPH4Q96JJ6 628 aa32.78■■■□□ 2.84
CDK16-208ENST00000517426 SHROOM2Q13796 1616 aa32.77■■■□□ 2.84
CDK16-208ENST00000517426 PRG4Q92954 1404 aaPredicted RBP32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms