RNA–Protein interactions for RNA: ENST00000517244.1

RN7SKP289-201, Transcript of RNA, 7SK small nuclear pseudogene 289, humanhuman

BASIC

Gene RN7SKP289, Length 295 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP289-201ENST00000517244 AEBP2Q6ZN18 517 aaPredicted RBP13.11□□□□□ -0.31
RN7SKP289-201ENST00000517244 POTEDQ86YR6 584 aa12.41□□□□□ -0.42
RN7SKP289-201ENST00000517244 CHIC1Q5VXU3 224 aa12.18□□□□□ -0.46
RN7SKP289-201ENST00000517244 SENP3Q9H4L4 574 aaPredicted RBP11.32□□□□□ -0.6
RN7SKP289-201ENST00000517244 PHF23Q9BUL5 403 aaPredicted RBP11.04□□□□□ -0.64
RN7SKP289-201ENST00000517244 FOXD1Q16676 465 aa10.75□□□□□ -0.69
RN7SKP289-201ENST00000517244 MSH5O43196 834 aa10.49□□□□□ -0.73
RN7SKP289-201ENST00000517244 CACNB1Q02641 598 aaPredicted RBP9.84□□□□□ -0.83
RN7SKP289-201ENST00000517244 PIAS4Q8N2W9 510 aaPredicted RBP9.77□□□□□ -0.85
RN7SKP289-201ENST00000517244 POTEHQ6S545 545 aa9.48□□□□□ -0.89
RN7SKP289-201ENST00000517244 PPP6R1Q9UPN7 881 aa9.13□□□□□ -0.95
RN7SKP289-201ENST00000517244 ADRA2BP18089 450 aa9.04□□□□□ -0.96
RN7SKP289-201ENST00000517244 RNF39Q9H2S5 420 aa8.85□□□□□ -0.99
RN7SKP289-201ENST00000517244 DNAJC5BQ9UF47 199 aa8.8□□□□□ -1
RN7SKP289-201ENST00000517244 DMRT2Q9Y5R5 561 aa8.78□□□□□ -1
RN7SKP289-201ENST00000517244 MAPK8IP2Q13387 824 aaPredicted RBP8.69□□□□□ -1.02
RN7SKP289-201ENST00000517244 DNAJC5Q9H3Z4 198 aa8.65□□□□□ -1.02
RN7SKP289-201ENST00000517244 ABCC9O60706 1549 aa8.64□□□□□ -1.03
RN7SKP289-201ENST00000517244 DCAF8L1A6NGE4 600 aa8.62□□□□□ -1.03
RN7SKP289-201ENST00000517244 C1QBPQ07021 282 aaKnown RBP8.62□□□□□ -1.03
RN7SKP289-201ENST00000517244 PLSCR2Q9NRY7 297 aa8.43□□□□□ -1.06
RN7SKP289-201ENST00000517244 PLPPR3Q6T4P5 718 aa8.37□□□□□ -1.07
RN7SKP289-201ENST00000517244 SP7Q8TDD2 431 aaPredicted RBP8.29□□□□□ -1.08
RN7SKP289-201ENST00000517244 NISCHQ9Y2I1 1504 aa8.24□□□□□ -1.09
RN7SKP289-201ENST00000517244 SCAF1Q9H7N4 1312 aaKnown RBP8.18□□□□□ -1.1
RN7SKP289-201ENST00000517244 TRIM41Q8WV44 630 aa8.04□□□□□ -1.12
RN7SKP289-201ENST00000517244 HOXD11P31277 338 aaPredicted RBP7.95□□□□□ -1.14
RN7SKP289-201ENST00000517244 CHRDL2Q6WN34 429 aa7.9□□□□□ -1.14
RN7SKP289-201ENST00000517244 PABPN1Q86U42 306 aaKnown RBP eCLIP7.9□□□□□ -1.14
RN7SKP289-201ENST00000517244 DSG3P32926 999 aa7.89□□□□□ -1.15
RN7SKP289-201ENST00000517244 SLC24A1O60721 1099 aa7.84□□□□□ -1.15
RN7SKP289-201ENST00000517244 EHMT2Q96KQ7 1210 aa7.84□□□□□ -1.15
RN7SKP289-201ENST00000517244 CECR2Q9BXF3 1484 aa7.83□□□□□ -1.16
RN7SKP289-201ENST00000517244 RB1CC1Q8TDY2 1594 aa7.8□□□□□ -1.16
RN7SKP289-201ENST00000517244 CCDC180Q9P1Z9 1646 aa7.78□□□□□ -1.16
RN7SKP289-201ENST00000517244 LHX8Q68G74 356 aa7.77□□□□□ -1.17
RN7SKP289-201ENST00000517244 CC2D2AQ9P2K1 1620 aa7.74□□□□□ -1.17
RN7SKP289-201ENST00000517244 UNC13AQ9UPW8 1703 aa7.72□□□□□ -1.17
RN7SKP289-201ENST00000517244 CUX2O14529 1486 aa7.71□□□□□ -1.18
RN7SKP289-201ENST00000517244 HAX1O00165 279 aa7.69□□□□□ -1.18
RN7SKP289-201ENST00000517244 CAPN15O75808 1086 aa7.69□□□□□ -1.18
RN7SKP289-201ENST00000517244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.65□□□□□ -1.18
RN7SKP289-201ENST00000517244 SPINK5Q9NQ38 1064 aaPredicted RBP7.64□□□□□ -1.19
RN7SKP289-201ENST00000517244 ILDR1Q86SU0 546 aaPredicted RBP7.63□□□□□ -1.19
RN7SKP289-201ENST00000517244 BICRAQ9NZM4 1560 aa7.61□□□□□ -1.19
RN7SKP289-201ENST00000517244 RNF216Q9NWF9 866 aaPredicted RBP7.57□□□□□ -1.2
RN7SKP289-201ENST00000517244 NACADO15069 1562 aa7.51□□□□□ -1.21
RN7SKP289-201ENST00000517244 ERCC6Q03468 1493 aa7.51□□□□□ -1.21
RN7SKP289-201ENST00000517244 RBM42Q9BTD8 480 aaKnown RBP7.51□□□□□ -1.21
RN7SKP289-201ENST00000517244 EVX2Q03828 476 aa7.5□□□□□ -1.21
RN7SKP289-201ENST00000517244 EIF4G1Q04637 1599 aaKnown RBP7.5□□□□□ -1.21
RN7SKP289-201ENST00000517244 PIP4P2Q8N4L2 257 aa7.45□□□□□ -1.22
RN7SKP289-201ENST00000517244 ABCB7O75027 752 aa7.44□□□□□ -1.22
RN7SKP289-201ENST00000517244 KCNA4P22459 653 aa7.43□□□□□ -1.22
RN7SKP289-201ENST00000517244 AMER1Q5JTC6 1135 aaPredicted RBP7.43□□□□□ -1.22
RN7SKP289-201ENST00000517244 POTEMA6NI47 508 aa7.41□□□□□ -1.22
RN7SKP289-201ENST00000517244 DCAF8L2P0C7V8 631 aa7.41□□□□□ -1.22
RN7SKP289-201ENST00000517244 TRHP20396 242 aaPredicted RBP7.4□□□□□ -1.22
RN7SKP289-201ENST00000517244 CSRNP3Q8WYN3 585 aa7.38□□□□□ -1.23
RN7SKP289-201ENST00000517244 POTEGQ6S5H5 508 aa7.34□□□□□ -1.23
RN7SKP289-201ENST00000517244 SHROOM4Q9ULL8 1493 aa7.33□□□□□ -1.24
RN7SKP289-201ENST00000517244 CNKSR2Q8WXI2 1034 aa7.33□□□□□ -1.24
RN7SKP289-201ENST00000517244 U3KPZ7 1027 aaPredicted RBP7.33□□□□□ -1.24
RN7SKP289-201ENST00000517244 SLC4A1APQ9BWU0 796 aaKnown RBP7.3□□□□□ -1.24
RN7SKP289-201ENST00000517244 RIMBP3CA6NJZ7 1639 aa7.3□□□□□ -1.24
RN7SKP289-201ENST00000517244 RIMBP3BA6NNM3 1639 aa7.3□□□□□ -1.24
RN7SKP289-201ENST00000517244 RIMBP3Q9UFD9 1639 aa7.3□□□□□ -1.24
RN7SKP289-201ENST00000517244 RTN4Q9NQC3 1192 aaKnown RBP7.28□□□□□ -1.24
RN7SKP289-201ENST00000517244 THOC2Q8NI27 1593 aaKnown RBP7.26□□□□□ -1.25
RN7SKP289-201ENST00000517244 BAZ1AQ9NRL2 1556 aaPredicted RBP7.26□□□□□ -1.25
RN7SKP289-201ENST00000517244 PCDH10Q9P2E7 1040 aa7.24□□□□□ -1.25
RN7SKP289-201ENST00000517244 GABBR2O75899 941 aa7.23□□□□□ -1.25
RN7SKP289-201ENST00000517244 OSCARQ8IYS5 282 aa7.23□□□□□ -1.25
RN7SKP289-201ENST00000517244 PPP4R3CPQ6ZMV5 832 aa7.21□□□□□ -1.26
RN7SKP289-201ENST00000517244 LMTK3Q96Q04 1460 aa7.18□□□□□ -1.26
RN7SKP289-201ENST00000517244 NESP48681 1621 aa7.18□□□□□ -1.26
RN7SKP289-201ENST00000517244 SMARCA2P51531 1590 aa7.17□□□□□ -1.26
RN7SKP289-201ENST00000517244 FXR2P51116 673 aaKnown RBP eCLIP7.16□□□□□ -1.26
RN7SKP289-201ENST00000517244 CYB5RLQ6IPT4 315 aa7.16□□□□□ -1.26
RN7SKP289-201ENST00000517244 ARHGEF11O15085 1522 aa7.16□□□□□ -1.26
RN7SKP289-201ENST00000517244 SOCS7O14512 581 aa7.14□□□□□ -1.27
RN7SKP289-201ENST00000517244 ZNF219Q9P2Y4 722 aaPredicted RBP7.13□□□□□ -1.27
RN7SKP289-201ENST00000517244 SCRIBQ14160 1630 aa7.12□□□□□ -1.27
RN7SKP289-201ENST00000517244 KIF21AQ7Z4S6 1674 aa7.1□□□□□ -1.27
RN7SKP289-201ENST00000517244 AKT1S1Q96B36 256 aa7.09□□□□□ -1.27
RN7SKP289-201ENST00000517244 NCBP3Q53F19 620 aaKnown RBP7.08□□□□□ -1.28
RN7SKP289-201ENST00000517244 ILDR2Q71H61 639 aa7.08□□□□□ -1.28
RN7SKP289-201ENST00000517244 POTEIP0CG38 1075 aa7.07□□□□□ -1.28
RN7SKP289-201ENST00000517244 REM2Q8IYK8 340 aaPredicted RBP7.06□□□□□ -1.28
RN7SKP289-201ENST00000517244 MYO15BQ96JP2 1530 aa7.06□□□□□ -1.28
RN7SKP289-201ENST00000517244 FBXO41Q8TF61 875 aa7.05□□□□□ -1.28
RN7SKP289-201ENST00000517244 OTUD5Q96G74 571 aa7.04□□□□□ -1.28
RN7SKP289-201ENST00000517244 ARAP1Q96P48 1450 aa7.03□□□□□ -1.28
RN7SKP289-201ENST00000517244 PITPNM1O00562 1244 aa7.02□□□□□ -1.29
RN7SKP289-201ENST00000517244 ERCC6L2Q5T890 1561 aa7□□□□□ -1.29
RN7SKP289-201ENST00000517244 DISP3Q9P2K9 1392 aa6.98□□□□□ -1.29
RN7SKP289-201ENST00000517244 C19orf67A6NJJ6 358 aa6.98□□□□□ -1.29
RN7SKP289-201ENST00000517244 KDM4FA0A1W2PPD8 638 aa6.97□□□□□ -1.29
RN7SKP289-201ENST00000517244 LAMC3Q9Y6N6 1575 aa6.95□□□□□ -1.3
RN7SKP289-201ENST00000517244 WDR62O43379 1518 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms