RNA–Protein interactions for RNA: ENST00000517052.1

RNU6-448P-201, Transcript of RNA, U6 small nuclear 448, pseudogene, humanhuman

BASIC

Gene RNU6-448P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-448P-201ENST00000517052 AEBP2Q6ZN18 517 aaPredicted RBP10.46□□□□□ -0.73
RNU6-448P-201ENST00000517052 CHIC1Q5VXU3 224 aa9.76□□□□□ -0.85
RNU6-448P-201ENST00000517052 POTEDQ86YR6 584 aa9.48□□□□□ -0.89
RNU6-448P-201ENST00000517052 SENP3Q9H4L4 574 aaPredicted RBP9.06□□□□□ -0.96
RNU6-448P-201ENST00000517052 PHF23Q9BUL5 403 aaPredicted RBP8.83□□□□□ -1
RNU6-448P-201ENST00000517052 FOXD1Q16676 465 aa8.54□□□□□ -1.04
RNU6-448P-201ENST00000517052 MSH5O43196 834 aa8.31□□□□□ -1.08
RNU6-448P-201ENST00000517052 PIAS4Q8N2W9 510 aaPredicted RBP7.77□□□□□ -1.17
RNU6-448P-201ENST00000517052 CACNB1Q02641 598 aaPredicted RBP7.61□□□□□ -1.19
RNU6-448P-201ENST00000517052 PPP6R1Q9UPN7 881 aa7.36□□□□□ -1.23
RNU6-448P-201ENST00000517052 ADRA2BP18089 450 aa7.28□□□□□ -1.24
RNU6-448P-201ENST00000517052 POTEHQ6S545 545 aa7.27□□□□□ -1.25
RNU6-448P-201ENST00000517052 DMRT2Q9Y5R5 561 aa7.05□□□□□ -1.28
RNU6-448P-201ENST00000517052 RNF39Q9H2S5 420 aa7.01□□□□□ -1.29
RNU6-448P-201ENST00000517052 PLPPR3Q6T4P5 718 aa6.94□□□□□ -1.3
RNU6-448P-201ENST00000517052 MAPK8IP2Q13387 824 aaPredicted RBP6.93□□□□□ -1.3
RNU6-448P-201ENST00000517052 C1QBPQ07021 282 aaKnown RBP6.88□□□□□ -1.31
RNU6-448P-201ENST00000517052 DCAF8L1A6NGE4 600 aa6.77□□□□□ -1.33
RNU6-448P-201ENST00000517052 SCAF1Q9H7N4 1312 aaKnown RBP6.69□□□□□ -1.34
RNU6-448P-201ENST00000517052 HOXD11P31277 338 aaPredicted RBP6.49□□□□□ -1.37
RNU6-448P-201ENST00000517052 DNAJC5BQ9UF47 199 aa6.45□□□□□ -1.38
RNU6-448P-201ENST00000517052 SP7Q8TDD2 431 aaPredicted RBP6.43□□□□□ -1.38
RNU6-448P-201ENST00000517052 PLSCR2Q9NRY7 297 aa6.31□□□□□ -1.4
RNU6-448P-201ENST00000517052 DSG3P32926 999 aa6.29□□□□□ -1.4
RNU6-448P-201ENST00000517052 CHRDL2Q6WN34 429 aa6.22□□□□□ -1.41
RNU6-448P-201ENST00000517052 RNF216Q9NWF9 866 aaPredicted RBP6.22□□□□□ -1.41
RNU6-448P-201ENST00000517052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.16□□□□□ -1.42
RNU6-448P-201ENST00000517052 CAPN15O75808 1086 aa6.12□□□□□ -1.43
RNU6-448P-201ENST00000517052 SPINK5Q9NQ38 1064 aaPredicted RBP6.09□□□□□ -1.43
RNU6-448P-201ENST00000517052 CNKSR2Q8WXI2 1034 aa6.06□□□□□ -1.44
RNU6-448P-201ENST00000517052 LHX8Q68G74 356 aa6.02□□□□□ -1.45
RNU6-448P-201ENST00000517052 RBM42Q9BTD8 480 aaKnown RBP6.02□□□□□ -1.45
RNU6-448P-201ENST00000517052 HAX1O00165 279 aa6□□□□□ -1.45
RNU6-448P-201ENST00000517052 PPP4R3CPQ6ZMV5 832 aa5.97□□□□□ -1.45
RNU6-448P-201ENST00000517052 U3KPZ7 1027 aaPredicted RBP5.95□□□□□ -1.46
RNU6-448P-201ENST00000517052 ABCB7O75027 752 aa5.89□□□□□ -1.47
RNU6-448P-201ENST00000517052 PIP4P2Q8N4L2 257 aa5.89□□□□□ -1.47
RNU6-448P-201ENST00000517052 EVX2Q03828 476 aa5.87□□□□□ -1.47
RNU6-448P-201ENST00000517052 TRHP20396 242 aaPredicted RBP5.82□□□□□ -1.48
RNU6-448P-201ENST00000517052 ZNF219Q9P2Y4 722 aaPredicted RBP5.79□□□□□ -1.48
RNU6-448P-201ENST00000517052 FXR2P51116 673 aaKnown RBP eCLIP5.73□□□□□ -1.49
RNU6-448P-201ENST00000517052 AKT1S1Q96B36 256 aa5.72□□□□□ -1.49
RNU6-448P-201ENST00000517052 POTEMA6NI47 508 aa5.71□□□□□ -1.5
RNU6-448P-201ENST00000517052 APLP2Q06481 763 aa5.7□□□□□ -1.5
RNU6-448P-201ENST00000517052 GABBR2O75899 941 aa5.69□□□□□ -1.5
RNU6-448P-201ENST00000517052 PCDH10Q9P2E7 1040 aa5.69□□□□□ -1.5
RNU6-448P-201ENST00000517052 POTEGQ6S5H5 508 aa5.66□□□□□ -1.5
RNU6-448P-201ENST00000517052 REM2Q8IYK8 340 aaPredicted RBP5.66□□□□□ -1.5
RNU6-448P-201ENST00000517052 PITPNM1O00562 1244 aa5.6□□□□□ -1.51
RNU6-448P-201ENST00000517052 C19orf67A6NJJ6 358 aa5.58□□□□□ -1.52
RNU6-448P-201ENST00000517052 POTEIP0CG38 1075 aa5.57□□□□□ -1.52
RNU6-448P-201ENST00000517052 OTUD5Q96G74 571 aa5.52□□□□□ -1.53
RNU6-448P-201ENST00000517052 NCBP3Q53F19 620 aaKnown RBP5.51□□□□□ -1.53
RNU6-448P-201ENST00000517052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.5□□□□□ -1.53
RNU6-448P-201ENST00000517052 POLA2Q14181 598 aa5.5□□□□□ -1.53
RNU6-448P-201ENST00000517052 HNRNPUL2Q1KMD3 747 aaKnown RBP5.5□□□□□ -1.53
RNU6-448P-201ENST00000517052 PRKAR2AP13861 404 aaKnown RBP5.45□□□□□ -1.54
RNU6-448P-201ENST00000517052 SAMD1Q6SPF0 538 aaPredicted RBP5.43□□□□□ -1.54
RNU6-448P-201ENST00000517052 NPM3O75607 178 aaKnown RBP5.42□□□□□ -1.54
RNU6-448P-201ENST00000517052 SLC4A2P04920 1241 aa5.4□□□□□ -1.54
RNU6-448P-201ENST00000517052 POTEB2H3BUK9 544 aa5.37□□□□□ -1.55
RNU6-448P-201ENST00000517052 DCBLD2Q96PD2 775 aa5.36□□□□□ -1.55
RNU6-448P-201ENST00000517052 LCE2DQ5TA82 110 aaPredicted RBP5.35□□□□□ -1.55
RNU6-448P-201ENST00000517052 CLCN6P51797 869 aa5.34□□□□□ -1.55
RNU6-448P-201ENST00000517052 OSCARQ8IYS5 282 aa5.33□□□□□ -1.56
RNU6-448P-201ENST00000517052 ZBTB12Q9Y330 459 aaPredicted RBP5.32□□□□□ -1.56
RNU6-448P-201ENST00000517052 CDAN1Q8IWY9 1227 aa5.28□□□□□ -1.56
RNU6-448P-201ENST00000517052 FAM163AQ96GL9 167 aaPredicted RBP5.28□□□□□ -1.56
RNU6-448P-201ENST00000517052 MMRN1Q13201 1228 aa5.24□□□□□ -1.57
RNU6-448P-201ENST00000517052 CD44P16070 742 aaKnown RBP5.22□□□□□ -1.57
RNU6-448P-201ENST00000517052 CLEC11AQ9Y240 323 aa5.22□□□□□ -1.57
RNU6-448P-201ENST00000517052 CHADLQ6NUI6 762 aa5.2□□□□□ -1.58
RNU6-448P-201ENST00000517052 SPDYE1Q8NFV5 336 aaPredicted RBP5.2□□□□□ -1.58
RNU6-448P-201ENST00000517052 SPNS2Q8IVW8 549 aa5.17□□□□□ -1.58
RNU6-448P-201ENST00000517052 MAMSTRQ6ZN01 415 aa5.16□□□□□ -1.58
RNU6-448P-201ENST00000517052 POTEJP0CG39 1038 aa5.15□□□□□ -1.59
RNU6-448P-201ENST00000517052 ZNF579Q8NAF0 562 aaKnown RBP5.12□□□□□ -1.59
RNU6-448P-201ENST00000517052 GALR2O43603 387 aaPredicted RBP5.1□□□□□ -1.59
RNU6-448P-201ENST00000517052 SPDYE2BA6NHP3 402 aa5.09□□□□□ -1.59
RNU6-448P-201ENST00000517052 SPDYE6P0CI01 402 aa5.09□□□□□ -1.59
RNU6-448P-201ENST00000517052 SPDYE2Q495Y8 402 aa5.09□□□□□ -1.59
RNU6-448P-201ENST00000517052 PELP1Q8IZL8 1130 aaKnown RBP5.09□□□□□ -1.59
RNU6-448P-201ENST00000517052 SCUBE2Q9NQ36 999 aa5.07□□□□□ -1.6
RNU6-448P-201ENST00000517052 FARP1Q9Y4F1 1045 aaPredicted RBP5.07□□□□□ -1.6
RNU6-448P-201ENST00000517052 METRNQ9UJH8 293 aa5.04□□□□□ -1.6
RNU6-448P-201ENST00000517052 MYCNP04198 464 aaPredicted RBP5.03□□□□□ -1.6
RNU6-448P-201ENST00000517052 PRR29P0C7W0 189 aa5.03□□□□□ -1.6
RNU6-448P-201ENST00000517052 ZRANB1Q9UGI0 708 aa5.03□□□□□ -1.6
RNU6-448P-201ENST00000517052 C7P10643 843 aa5.02□□□□□ -1.61
RNU6-448P-201ENST00000517052 SLC39A7Q92504 469 aa5.01□□□□□ -1.61
RNU6-448P-201ENST00000517052 ATF5Q9Y2D1 282 aaPredicted RBP4.97□□□□□ -1.61
RNU6-448P-201ENST00000517052 ST18O60284 1047 aa4.96□□□□□ -1.62
RNU6-448P-201ENST00000517052 ASTLQ6HA08 431 aaPredicted RBP4.95□□□□□ -1.62
RNU6-448P-201ENST00000517052 SSUH2Q9Y2M2 353 aa4.94□□□□□ -1.62
RNU6-448P-201ENST00000517052 ATMINO43313 823 aaPredicted RBP4.91□□□□□ -1.62
RNU6-448P-201ENST00000517052 ZNF692Q9BU19 519 aaPredicted RBP4.9□□□□□ -1.63
RNU6-448P-201ENST00000517052 PHF12Q96QT6 1004 aa4.88□□□□□ -1.63
RNU6-448P-201ENST00000517052 POTEFA5A3E0 1075 aa4.86□□□□□ -1.63
RNU6-448P-201ENST00000517052 TMEM121BQ9BXQ6 578 aaPredicted RBP4.85□□□□□ -1.63
RNU6-448P-201ENST00000517052 FBLN2P98095 1184 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms