RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
SCARNA11.1-201ENST00000516918 ABCC9O60706 1549 aa16.09■□□□□ 0.17
SCARNA11.1-201ENST00000516918 CCDC180Q9P1Z9 1646 aa15.78■□□□□ 0.12
SCARNA11.1-201ENST00000516918 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
SCARNA11.1-201ENST00000516918 RB1CC1Q8TDY2 1594 aa15.16■□□□□ 0.02
SCARNA11.1-201ENST00000516918 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
SCARNA11.1-201ENST00000516918 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
SCARNA11.1-201ENST00000516918 NACADO15069 1562 aa15.02□□□□□ -0.01
SCARNA11.1-201ENST00000516918 UNC13AQ9UPW8 1703 aa14.77□□□□□ -0.05
SCARNA11.1-201ENST00000516918 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
SCARNA11.1-201ENST00000516918 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.05
SCARNA11.1-201ENST00000516918 ZCCHC6Q5VYS8 1495 aaKnown RBP14.55□□□□□ -0.08
SCARNA11.1-201ENST00000516918 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
SCARNA11.1-201ENST00000516918 DCAF1Q9Y4B6 1507 aa14.48□□□□□ -0.09
SCARNA11.1-201ENST00000516918 SCRIBQ14160 1630 aa14.48□□□□□ -0.09
SCARNA11.1-201ENST00000516918 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
SCARNA11.1-201ENST00000516918 SHROOM4Q9ULL8 1493 aa14.45□□□□□ -0.1
SCARNA11.1-201ENST00000516918 EIF4G1Q04637 1599 aaKnown RBP14.39□□□□□ -0.11
SCARNA11.1-201ENST00000516918 DNAJC5Q9H3Z4 198 aa14.13□□□□□ -0.15
SCARNA11.1-201ENST00000516918 ERCC6Q03468 1493 aa13.9□□□□□ -0.18
SCARNA11.1-201ENST00000516918 NCAPD3P42695 1498 aa13.89□□□□□ -0.19
SCARNA11.1-201ENST00000516918 CUX2O14529 1486 aa13.87□□□□□ -0.19
SCARNA11.1-201ENST00000516918 ATAD2BQ9ULI0 1458 aa13.85□□□□□ -0.19
SCARNA11.1-201ENST00000516918 NESP48681 1621 aa13.78□□□□□ -0.2
SCARNA11.1-201ENST00000516918 SMARCA2P51531 1590 aa13.76□□□□□ -0.21
SCARNA11.1-201ENST00000516918 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
SCARNA11.1-201ENST00000516918 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
SCARNA11.1-201ENST00000516918 BAZ1BQ9UIG0 1483 aaKnown RBP13.7□□□□□ -0.22
SCARNA11.1-201ENST00000516918 BAZ1AQ9NRL2 1556 aaPredicted RBP13.66□□□□□ -0.22
SCARNA11.1-201ENST00000516918 MROH2BQ7Z745 1585 aa13.59□□□□□ -0.23
SCARNA11.1-201ENST00000516918 THOC2Q8NI27 1593 aaKnown RBP13.59□□□□□ -0.23
SCARNA11.1-201ENST00000516918 PEG3Q9GZU2 1588 aa13.58□□□□□ -0.23
SCARNA11.1-201ENST00000516918 LAMC3Q9Y6N6 1575 aa13.56□□□□□ -0.24
SCARNA11.1-201ENST00000516918 PDS5BQ9NTI5 1447 aa13.55□□□□□ -0.24
SCARNA11.1-201ENST00000516918 KIF21AQ7Z4S6 1674 aa13.51□□□□□ -0.25
SCARNA11.1-201ENST00000516918 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
SCARNA11.1-201ENST00000516918 CADPSQ9ULU8 1353 aa13.49□□□□□ -0.25
SCARNA11.1-201ENST00000516918 MRC2Q9UBG0 1479 aa13.43□□□□□ -0.26
SCARNA11.1-201ENST00000516918 WIZO95785 1651 aa13.4□□□□□ -0.26
SCARNA11.1-201ENST00000516918 WDR62O43379 1518 aa13.38□□□□□ -0.27
SCARNA11.1-201ENST00000516918 CEP164Q9UPV0 1460 aa13.35□□□□□ -0.27
SCARNA11.1-201ENST00000516918 FANCD2Q9BXW9 1451 aa13.34□□□□□ -0.27
SCARNA11.1-201ENST00000516918 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
SCARNA11.1-201ENST00000516918 CFTRP13569 1480 aa13.29□□□□□ -0.28
SCARNA11.1-201ENST00000516918 RSF1Q96T23 1441 aaPredicted RBP13.26□□□□□ -0.29
SCARNA11.1-201ENST00000516918 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
SCARNA11.1-201ENST00000516918 TOP2AP11388 1531 aaKnown RBP13.21□□□□□ -0.29
SCARNA11.1-201ENST00000516918 ZNF608Q9ULD9 1512 aaPredicted RBP13.12□□□□□ -0.31
SCARNA11.1-201ENST00000516918 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
SCARNA11.1-201ENST00000516918 IFT140Q96RY7 1462 aa13.09□□□□□ -0.31
SCARNA11.1-201ENST00000516918 RIMBP3CA6NJZ7 1639 aa13.06□□□□□ -0.32
SCARNA11.1-201ENST00000516918 RIMBP3BA6NNM3 1639 aa13.06□□□□□ -0.32
SCARNA11.1-201ENST00000516918 RIMBP3Q9UFD9 1639 aa13.06□□□□□ -0.32
SCARNA11.1-201ENST00000516918 TOPBP1Q92547 1522 aa13.06□□□□□ -0.32
SCARNA11.1-201ENST00000516918 CYB5RLQ6IPT4 315 aa13.03□□□□□ -0.32
SCARNA11.1-201ENST00000516918 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
SCARNA11.1-201ENST00000516918 PRDM2Q13029 1718 aa13.02□□□□□ -0.32
SCARNA11.1-201ENST00000516918 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.33
SCARNA11.1-201ENST00000516918 FBLN2P98095 1184 aa13□□□□□ -0.33
SCARNA11.1-201ENST00000516918 ABCC8Q09428 1581 aa12.98□□□□□ -0.33
SCARNA11.1-201ENST00000516918 EIF4G3O43432 1585 aaKnown RBP12.97□□□□□ -0.33
SCARNA11.1-201ENST00000516918 DNMBPQ6XZF7 1577 aa12.96□□□□□ -0.33
SCARNA11.1-201ENST00000516918 TRHP20396 242 aaPredicted RBP12.94□□□□□ -0.34
SCARNA11.1-201ENST00000516918 TARBP1Q13395 1621 aaKnown RBP12.91□□□□□ -0.34
SCARNA11.1-201ENST00000516918 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
SCARNA11.1-201ENST00000516918 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
SCARNA11.1-201ENST00000516918 TDRD9Q8NDG6 1382 aaKnown RBP12.91□□□□□ -0.34
SCARNA11.1-201ENST00000516918 ARAP1Q96P48 1450 aa12.91□□□□□ -0.34
SCARNA11.1-201ENST00000516918 CHD1O14646 1710 aa12.9□□□□□ -0.34
SCARNA11.1-201ENST00000516918 SOGA1O94964 1423 aa12.88□□□□□ -0.35
SCARNA11.1-201ENST00000516918 CHMP7Q8WUX9 453 aaPredicted RBP12.84□□□□□ -0.35
SCARNA11.1-201ENST00000516918 SNAPC4Q5SXM2 1469 aa12.83□□□□□ -0.36
SCARNA11.1-201ENST00000516918 FGD5Q6ZNL6 1462 aa12.82□□□□□ -0.36
SCARNA11.1-201ENST00000516918 CUX1P39880 1505 aa12.77□□□□□ -0.37
SCARNA11.1-201ENST00000516918 GRIN2BQ13224 1484 aa12.76□□□□□ -0.37
SCARNA11.1-201ENST00000516918 CLASP1Q7Z460 1538 aa12.76□□□□□ -0.37
SCARNA11.1-201ENST00000516918 MAGI1Q96QZ7 1491 aaPredicted RBP12.75□□□□□ -0.37
SCARNA11.1-201ENST00000516918 SYNJ1O43426 1573 aa12.74□□□□□ -0.37
SCARNA11.1-201ENST00000516918 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
SCARNA11.1-201ENST00000516918 WDR97A6NE52 1622 aa12.71□□□□□ -0.37
SCARNA11.1-201ENST00000516918 GAPVD1Q14C86 1478 aa12.7□□□□□ -0.38
SCARNA11.1-201ENST00000516918 AEBP2Q6ZN18 517 aaPredicted RBP12.68□□□□□ -0.38
SCARNA11.1-201ENST00000516918 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
SCARNA11.1-201ENST00000516918 ABCA10Q8WWZ4 1543 aa12.64□□□□□ -0.39
SCARNA11.1-201ENST00000516918 PBRM1Q86U86 1689 aa12.64□□□□□ -0.39
SCARNA11.1-201ENST00000516918 ABCA5Q8WWZ7 1642 aa12.6□□□□□ -0.39
SCARNA11.1-201ENST00000516918 ERCC6L2Q5T890 1561 aa12.6□□□□□ -0.39
SCARNA11.1-201ENST00000516918 WRNQ14191 1432 aaPredicted RBP eCLIP12.59□□□□□ -0.39
SCARNA11.1-201ENST00000516918 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
SCARNA11.1-201ENST00000516918 NUP160Q12769 1436 aa12.55□□□□□ -0.4
SCARNA11.1-201ENST00000516918 CEP170Q5SW79 1584 aa12.54□□□□□ -0.4
SCARNA11.1-201ENST00000516918 ADAMTS12P58397 1594 aa12.53□□□□□ -0.4
SCARNA11.1-201ENST00000516918 FHAD1B1AJZ9 1412 aa12.53□□□□□ -0.4
SCARNA11.1-201ENST00000516918 JPH4Q96JJ6 628 aa12.49□□□□□ -0.41
SCARNA11.1-201ENST00000516918 TOP2BQ02880 1626 aa12.48□□□□□ -0.41
SCARNA11.1-201ENST00000516918 PRG4Q92954 1404 aaPredicted RBP12.48□□□□□ -0.41
SCARNA11.1-201ENST00000516918 SHROOM2Q13796 1616 aa12.46□□□□□ -0.41
SCARNA11.1-201ENST00000516918 BIVM-ERCC5R4GMW8 1640 aa12.46□□□□□ -0.41
SCARNA11.1-201ENST00000516918 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.42
SCARNA11.1-201ENST00000516918 FAM69CQ0P6D2 419 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms