RNA–Protein interactions for RNA: ENST00000516582.1

RNU6-638P-201, Transcript of RNA, U6 small nuclear 638, pseudogene, humanhuman

BASIC

Gene RNU6-638P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-638P-201ENST00000516582 AEBP2Q6ZN18 517 aaPredicted RBP16.67■□□□□ 0.26
RNU6-638P-201ENST00000516582 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
RNU6-638P-201ENST00000516582 POTEDQ86YR6 584 aa15.25■□□□□ 0.03
RNU6-638P-201ENST00000516582 SENP3Q9H4L4 574 aaPredicted RBP14.37□□□□□ -0.11
RNU6-638P-201ENST00000516582 PHF23Q9BUL5 403 aaPredicted RBP14.01□□□□□ -0.17
RNU6-638P-201ENST00000516582 FOXD1Q16676 465 aa13.6□□□□□ -0.23
RNU6-638P-201ENST00000516582 MSH5O43196 834 aa13.2□□□□□ -0.3
RNU6-638P-201ENST00000516582 PIAS4Q8N2W9 510 aaPredicted RBP12.38□□□□□ -0.43
RNU6-638P-201ENST00000516582 CACNB1Q02641 598 aaPredicted RBP12.19□□□□□ -0.46
RNU6-638P-201ENST00000516582 PPP6R1Q9UPN7 881 aa11.7□□□□□ -0.54
RNU6-638P-201ENST00000516582 POTEHQ6S545 545 aa11.67□□□□□ -0.54
RNU6-638P-201ENST00000516582 ADRA2BP18089 450 aa11.57□□□□□ -0.56
RNU6-638P-201ENST00000516582 DMRT2Q9Y5R5 561 aa11.2□□□□□ -0.62
RNU6-638P-201ENST00000516582 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
RNU6-638P-201ENST00000516582 MAPK8IP2Q13387 824 aaPredicted RBP11.05□□□□□ -0.64
RNU6-638P-201ENST00000516582 PLPPR3Q6T4P5 718 aa10.93□□□□□ -0.66
RNU6-638P-201ENST00000516582 C1QBPQ07021 282 aaKnown RBP10.89□□□□□ -0.67
RNU6-638P-201ENST00000516582 DCAF8L1A6NGE4 600 aa10.83□□□□□ -0.68
RNU6-638P-201ENST00000516582 SCAF1Q9H7N4 1312 aaKnown RBP10.5□□□□□ -0.73
RNU6-638P-201ENST00000516582 SP7Q8TDD2 431 aaPredicted RBP10.3□□□□□ -0.76
RNU6-638P-201ENST00000516582 HOXD11P31277 338 aaPredicted RBP10.25□□□□□ -0.77
RNU6-638P-201ENST00000516582 PLSCR2Q9NRY7 297 aa10.21□□□□□ -0.77
RNU6-638P-201ENST00000516582 DNAJC5BQ9UF47 199 aa10.11□□□□□ -0.79
RNU6-638P-201ENST00000516582 DSG3P32926 999 aa10.01□□□□□ -0.81
RNU6-638P-201ENST00000516582 CHRDL2Q6WN34 429 aa9.91□□□□□ -0.82
RNU6-638P-201ENST00000516582 RNF216Q9NWF9 866 aaPredicted RBP9.79□□□□□ -0.84
RNU6-638P-201ENST00000516582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.77□□□□□ -0.85
RNU6-638P-201ENST00000516582 CAPN15O75808 1086 aa9.74□□□□□ -0.85
RNU6-638P-201ENST00000516582 SPINK5Q9NQ38 1064 aaPredicted RBP9.73□□□□□ -0.85
RNU6-638P-201ENST00000516582 LHX8Q68G74 356 aa9.63□□□□□ -0.87
RNU6-638P-201ENST00000516582 HAX1O00165 279 aa9.57□□□□□ -0.88
RNU6-638P-201ENST00000516582 RBM42Q9BTD8 480 aaKnown RBP9.54□□□□□ -0.88
RNU6-638P-201ENST00000516582 CNKSR2Q8WXI2 1034 aa9.53□□□□□ -0.88
RNU6-638P-201ENST00000516582 ABCB7O75027 752 aa9.43□□□□□ -0.9
RNU6-638P-201ENST00000516582 U3KPZ7 1027 aaPredicted RBP9.43□□□□□ -0.9
RNU6-638P-201ENST00000516582 PPP4R3CPQ6ZMV5 832 aa9.42□□□□□ -0.9
RNU6-638P-201ENST00000516582 EVX2Q03828 476 aa9.4□□□□□ -0.9
RNU6-638P-201ENST00000516582 PIP4P2Q8N4L2 257 aa9.4□□□□□ -0.9
RNU6-638P-201ENST00000516582 TRHP20396 242 aaPredicted RBP9.26□□□□□ -0.93
RNU6-638P-201ENST00000516582 POTEMA6NI47 508 aa9.16□□□□□ -0.94
RNU6-638P-201ENST00000516582 ZNF219Q9P2Y4 722 aaPredicted RBP9.16□□□□□ -0.94
RNU6-638P-201ENST00000516582 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
RNU6-638P-201ENST00000516582 POTEGQ6S5H5 508 aa9.09□□□□□ -0.95
RNU6-638P-201ENST00000516582 GABBR2O75899 941 aa9.07□□□□□ -0.96
RNU6-638P-201ENST00000516582 AKT1S1Q96B36 256 aa9.04□□□□□ -0.96
RNU6-638P-201ENST00000516582 PCDH10Q9P2E7 1040 aa9.01□□□□□ -0.97
RNU6-638P-201ENST00000516582 REM2Q8IYK8 340 aaPredicted RBP8.99□□□□□ -0.97
RNU6-638P-201ENST00000516582 APLP2Q06481 763 aa8.94□□□□□ -0.98
RNU6-638P-201ENST00000516582 PITPNM1O00562 1244 aa8.93□□□□□ -0.98
RNU6-638P-201ENST00000516582 POTEIP0CG38 1075 aa8.9□□□□□ -0.98
RNU6-638P-201ENST00000516582 C19orf67A6NJJ6 358 aa8.86□□□□□ -0.99
RNU6-638P-201ENST00000516582 OTUD5Q96G74 571 aa8.81□□□□□ -1
RNU6-638P-201ENST00000516582 POLA2Q14181 598 aa8.7□□□□□ -1.02
RNU6-638P-201ENST00000516582 PRKAR2AP13861 404 aaKnown RBP8.68□□□□□ -1.02
RNU6-638P-201ENST00000516582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.61□□□□□ -1.03
RNU6-638P-201ENST00000516582 HNRNPUL2Q1KMD3 747 aaKnown RBP8.61□□□□□ -1.03
RNU6-638P-201ENST00000516582 NCBP3Q53F19 620 aaKnown RBP8.6□□□□□ -1.03
RNU6-638P-201ENST00000516582 POTEB2H3BUK9 544 aa8.59□□□□□ -1.03
RNU6-638P-201ENST00000516582 LCE2DQ5TA82 110 aaPredicted RBP8.58□□□□□ -1.04
RNU6-638P-201ENST00000516582 NPM3O75607 178 aaKnown RBP8.54□□□□□ -1.04
RNU6-638P-201ENST00000516582 SLC4A2P04920 1241 aa8.52□□□□□ -1.05
RNU6-638P-201ENST00000516582 SAMD1Q6SPF0 538 aaPredicted RBP8.52□□□□□ -1.05
RNU6-638P-201ENST00000516582 DCBLD2Q96PD2 775 aa8.52□□□□□ -1.05
RNU6-638P-201ENST00000516582 OSCARQ8IYS5 282 aa8.5□□□□□ -1.05
RNU6-638P-201ENST00000516582 FAM163AQ96GL9 167 aaPredicted RBP8.43□□□□□ -1.06
RNU6-638P-201ENST00000516582 CDAN1Q8IWY9 1227 aa8.42□□□□□ -1.06
RNU6-638P-201ENST00000516582 MMRN1Q13201 1228 aa8.39□□□□□ -1.07
RNU6-638P-201ENST00000516582 CLCN6P51797 869 aa8.37□□□□□ -1.07
RNU6-638P-201ENST00000516582 ZBTB12Q9Y330 459 aaPredicted RBP8.37□□□□□ -1.07
RNU6-638P-201ENST00000516582 CHADLQ6NUI6 762 aa8.32□□□□□ -1.08
RNU6-638P-201ENST00000516582 CD44P16070 742 aaKnown RBP8.31□□□□□ -1.08
RNU6-638P-201ENST00000516582 CLEC11AQ9Y240 323 aa8.3□□□□□ -1.08
RNU6-638P-201ENST00000516582 SPNS2Q8IVW8 549 aa8.25□□□□□ -1.09
RNU6-638P-201ENST00000516582 POTEJP0CG39 1038 aa8.24□□□□□ -1.09
RNU6-638P-201ENST00000516582 SPDYE1Q8NFV5 336 aaPredicted RBP8.2□□□□□ -1.1
RNU6-638P-201ENST00000516582 MAMSTRQ6ZN01 415 aa8.15□□□□□ -1.1
RNU6-638P-201ENST00000516582 GALR2O43603 387 aaPredicted RBP8.14□□□□□ -1.11
RNU6-638P-201ENST00000516582 PELP1Q8IZL8 1130 aaKnown RBP8.11□□□□□ -1.11
RNU6-638P-201ENST00000516582 ZNF579Q8NAF0 562 aaKnown RBP8.11□□□□□ -1.11
RNU6-638P-201ENST00000516582 SCUBE2Q9NQ36 999 aa8.06□□□□□ -1.12
RNU6-638P-201ENST00000516582 METRNQ9UJH8 293 aa8.05□□□□□ -1.12
RNU6-638P-201ENST00000516582 SPDYE2BA6NHP3 402 aa8.02□□□□□ -1.13
RNU6-638P-201ENST00000516582 SPDYE6P0CI01 402 aa8.02□□□□□ -1.13
RNU6-638P-201ENST00000516582 SPDYE2Q495Y8 402 aa8.02□□□□□ -1.13
RNU6-638P-201ENST00000516582 FARP1Q9Y4F1 1045 aaPredicted RBP8.01□□□□□ -1.13
RNU6-638P-201ENST00000516582 ZRANB1Q9UGI0 708 aa7.98□□□□□ -1.13
RNU6-638P-201ENST00000516582 PRR29P0C7W0 189 aa7.94□□□□□ -1.14
RNU6-638P-201ENST00000516582 C7P10643 843 aa7.94□□□□□ -1.14
RNU6-638P-201ENST00000516582 SLC39A7Q92504 469 aa7.92□□□□□ -1.14
RNU6-638P-201ENST00000516582 ST18O60284 1047 aa7.9□□□□□ -1.14
RNU6-638P-201ENST00000516582 MYCNP04198 464 aaPredicted RBP7.9□□□□□ -1.14
RNU6-638P-201ENST00000516582 ATF5Q9Y2D1 282 aaPredicted RBP7.88□□□□□ -1.15
RNU6-638P-201ENST00000516582 ASTLQ6HA08 431 aaPredicted RBP7.84□□□□□ -1.15
RNU6-638P-201ENST00000516582 ATMINO43313 823 aaPredicted RBP7.8□□□□□ -1.16
RNU6-638P-201ENST00000516582 PHF12Q96QT6 1004 aa7.78□□□□□ -1.16
RNU6-638P-201ENST00000516582 SSUH2Q9Y2M2 353 aa7.78□□□□□ -1.16
RNU6-638P-201ENST00000516582 POTEFA5A3E0 1075 aa7.74□□□□□ -1.17
RNU6-638P-201ENST00000516582 ZNF692Q9BU19 519 aaPredicted RBP7.71□□□□□ -1.18
RNU6-638P-201ENST00000516582 TMEM121BQ9BXQ6 578 aaPredicted RBP7.67□□□□□ -1.18
RNU6-638P-201ENST00000516582 KRTAP3-3Q9BYR6 98 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms