RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 NISCHQ9Y2I1 1504 aa3.32□□□□□ -1.88
RNU4ATAC11P-201ENST00000515939 DNAJC5BQ9UF47 199 aa3.14□□□□□ -1.91
RNU4ATAC11P-201ENST00000515939 ABCC9O60706 1549 aa3.13□□□□□ -1.91
RNU4ATAC11P-201ENST00000515939 CCDC180Q9P1Z9 1646 aa3.01□□□□□ -1.93
RNU4ATAC11P-201ENST00000515939 UNC13AQ9UPW8 1703 aa2.97□□□□□ -1.93
RNU4ATAC11P-201ENST00000515939 BICRAQ9NZM4 1560 aa2.92□□□□□ -1.94
RNU4ATAC11P-201ENST00000515939 PABPN1Q86U42 306 aaKnown RBP eCLIP2.9□□□□□ -1.95
RNU4ATAC11P-201ENST00000515939 RB1CC1Q8TDY2 1594 aa2.88□□□□□ -1.95
RNU4ATAC11P-201ENST00000515939 DNAJC5Q9H3Z4 198 aa2.87□□□□□ -1.95
RNU4ATAC11P-201ENST00000515939 NACADO15069 1562 aa2.85□□□□□ -1.95
RNU4ATAC11P-201ENST00000515939 CC2D2AQ9P2K1 1620 aa2.83□□□□□ -1.96
RNU4ATAC11P-201ENST00000515939 CECR2Q9BXF3 1484 aa2.8□□□□□ -1.96
RNU4ATAC11P-201ENST00000515939 EIF4G1Q04637 1599 aaKnown RBP2.79□□□□□ -1.96
RNU4ATAC11P-201ENST00000515939 MYO15BQ96JP2 1530 aa2.78□□□□□ -1.97
RNU4ATAC11P-201ENST00000515939 DCAF8L2P0C7V8 631 aa2.77□□□□□ -1.97
RNU4ATAC11P-201ENST00000515939 SCRIBQ14160 1630 aa2.75□□□□□ -1.97
RNU4ATAC11P-201ENST00000515939 ZCCHC6Q5VYS8 1495 aaKnown RBP2.72□□□□□ -1.97
RNU4ATAC11P-201ENST00000515939 DCAF1Q9Y4B6 1507 aa2.72□□□□□ -1.97
RNU4ATAC11P-201ENST00000515939 SHROOM4Q9ULL8 1493 aa2.71□□□□□ -1.97
RNU4ATAC11P-201ENST00000515939 NESP48681 1621 aa2.7□□□□□ -1.98
RNU4ATAC11P-201ENST00000515939 CUX2O14529 1486 aa2.69□□□□□ -1.98
RNU4ATAC11P-201ENST00000515939 THOC2Q8NI27 1593 aaKnown RBP2.68□□□□□ -1.98
RNU4ATAC11P-201ENST00000515939 KIF21AQ7Z4S6 1674 aa2.66□□□□□ -1.98
RNU4ATAC11P-201ENST00000515939 NCAPD3P42695 1498 aa2.65□□□□□ -1.98
RNU4ATAC11P-201ENST00000515939 TRIM41Q8WV44 630 aa2.65□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 ATAD2BQ9ULI0 1458 aa2.65□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 SMARCA4P51532 1647 aa2.62□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 ERCC6Q03468 1493 aa2.62□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 HMGXB3Q12766 1538 aa2.61□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 SMARCA2P51531 1590 aa2.61□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 PEG3Q9GZU2 1588 aa2.6□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 MROH2BQ7Z745 1585 aa2.59□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 BAZ1AQ9NRL2 1556 aaPredicted RBP2.59□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 LAMC3Q9Y6N6 1575 aa2.59□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 RIMBP3CA6NJZ7 1639 aa2.59□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 RIMBP3BA6NNM3 1639 aa2.59□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 RIMBP3Q9UFD9 1639 aa2.59□□□□□ -1.99
RNU4ATAC11P-201ENST00000515939 WDR62O43379 1518 aa2.58□□□□□ -2
RNU4ATAC11P-201ENST00000515939 MRC2Q9UBG0 1479 aa2.56□□□□□ -2
RNU4ATAC11P-201ENST00000515939 BAZ1BQ9UIG0 1483 aaKnown RBP2.56□□□□□ -2
RNU4ATAC11P-201ENST00000515939 URB2Q14146 1524 aaKnown RBP2.56□□□□□ -2
RNU4ATAC11P-201ENST00000515939 WIZO95785 1651 aa2.56□□□□□ -2
RNU4ATAC11P-201ENST00000515939 ZNF608Q9ULD9 1512 aaPredicted RBP2.55□□□□□ -2
RNU4ATAC11P-201ENST00000515939 CADPSQ9ULU8 1353 aa2.55□□□□□ -2
RNU4ATAC11P-201ENST00000515939 ARHGEF11O15085 1522 aa2.54□□□□□ -2
RNU4ATAC11P-201ENST00000515939 OSCARQ8IYS5 282 aa2.54□□□□□ -2
RNU4ATAC11P-201ENST00000515939 CHD1O14646 1710 aa2.54□□□□□ -2
RNU4ATAC11P-201ENST00000515939 ARAP1Q96P48 1450 aa2.53□□□□□ -2
RNU4ATAC11P-201ENST00000515939 PDS5BQ9NTI5 1447 aa2.53□□□□□ -2
RNU4ATAC11P-201ENST00000515939 PRDM2Q13029 1718 aa2.52□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 CFTRP13569 1480 aa2.52□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 FANCD2Q9BXW9 1451 aa2.52□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 TARBP1Q13395 1621 aaKnown RBP2.51□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 CYB5RLQ6IPT4 315 aa2.51□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 CEP164Q9UPV0 1460 aa2.51□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 KIF13AQ9H1H9 1805 aa2.5□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 EIF4G3O43432 1585 aaKnown RBP2.49□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 ERCC6L2Q5T890 1561 aa2.49□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 AQRO60306 1485 aaKnown RBP eCLIP2.49□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 CLASP1Q7Z460 1538 aa2.48□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 TOPBP1Q92547 1522 aa2.48□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 RSF1Q96T23 1441 aaPredicted RBP2.47□□□□□ -2.01
RNU4ATAC11P-201ENST00000515939 CCDC88BA6NC98 1476 aa2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 IFT140Q96RY7 1462 aa2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 RAD54L2Q9Y4B4 1467 aa2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 TRHP20396 242 aaPredicted RBP2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 ILDR1Q86SU0 546 aaPredicted RBP2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 TOP2AP11388 1531 aaKnown RBP2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 WDR97A6NE52 1622 aa2.46□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 KDM4FA0A1W2PPD8 638 aa2.45□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 POLA1P09884 1462 aaPredicted RBP2.45□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 DNMBPQ6XZF7 1577 aa2.44□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 TDRD9Q8NDG6 1382 aaKnown RBP2.44□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 CUX1P39880 1505 aa2.43□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 AEBP2Q6ZN18 517 aaPredicted RBP2.43□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 GAPVD1Q14C86 1478 aa2.43□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 SNAPC4Q5SXM2 1469 aa2.43□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 PBRM1Q86U86 1689 aa2.43□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 TSPOAP1O95153 1857 aa2.43□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 PPRC1Q5VV67 1664 aaKnown RBP2.42□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 CEP170Q5SW79 1584 aa2.42□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 SHROOM2Q13796 1616 aa2.42□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 FGD5Q6ZNL6 1462 aa2.41□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 FBLN2P98095 1184 aa2.41□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 ABCA5Q8WWZ7 1642 aa2.41□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 SOGA1O94964 1423 aa2.41□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 COL17A1Q9UMD9 1497 aaPredicted RBP2.4□□□□□ -2.02
RNU4ATAC11P-201ENST00000515939 NUP160Q12769 1436 aa2.4□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 SYNJ1O43426 1573 aa2.4□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 ABCC8Q09428 1581 aa2.4□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 DIP2BQ9P265 1576 aa2.4□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 SYNJ2O15056 1496 aa2.39□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 MAGI1Q96QZ7 1491 aaPredicted RBP2.39□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 ADCY10Q96PN6 1610 aa2.39□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 GRIN2BQ13224 1484 aa2.39□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 ADAMTS12P58397 1594 aa2.38□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 GRIN2AQ12879 1464 aa2.38□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 ABCC10Q5T3U5 1492 aa2.38□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 ABCA10Q8WWZ4 1543 aa2.37□□□□□ -2.03
RNU4ATAC11P-201ENST00000515939 HECW2Q9P2P5 1572 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms