RNA–Protein interactions for RNA: ENST00000515475.1

PRELID2-209, Transcript of PRELI domain containing 2, humanhuman

TSL 4

Gene PRELID2, Length 582 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRELID2-209ENST00000515475 NISCHQ9Y2I1 1504 aa67.23■■■■■ 8.35
PRELID2-209ENST00000515475 CCDC180Q9P1Z9 1646 aa60.42■■■■■ 7.26
PRELID2-209ENST00000515475 ABCC9O60706 1549 aa60.09■■■■■ 7.21
PRELID2-209ENST00000515475 RB1CC1Q8TDY2 1594 aa57.41■■■■■ 6.78
PRELID2-209ENST00000515475 NACADO15069 1562 aa57.06■■■■■ 6.72
PRELID2-209ENST00000515475 DCAF8L2P0C7V8 631 aa56.51■■■■■ 6.64
PRELID2-209ENST00000515475 MYO15BQ96JP2 1530 aa56.35■■■■■ 6.61
PRELID2-209ENST00000515475 DNAJC5BQ9UF47 199 aa56.16■■■■■ 6.58
PRELID2-209ENST00000515475 UNC13AQ9UPW8 1703 aa56.11■■■■■ 6.57
PRELID2-209ENST00000515475 PABPN1Q86U42 306 aaKnown RBP eCLIP55.87■■■■■ 6.53
PRELID2-209ENST00000515475 ZCCHC6Q5VYS8 1495 aaKnown RBP55.75■■■■■ 6.52
PRELID2-209ENST00000515475 BICRAQ9NZM4 1560 aa55.65■■■■■ 6.5
PRELID2-209ENST00000515475 DCAF1Q9Y4B6 1507 aa55.64■■■■■ 6.5
PRELID2-209ENST00000515475 SHROOM4Q9ULL8 1493 aa55.1■■■■■ 6.41
PRELID2-209ENST00000515475 SCRIBQ14160 1630 aa54.89■■■■■ 6.38
PRELID2-209ENST00000515475 CC2D2AQ9P2K1 1620 aa54.38■■■■■ 6.3
PRELID2-209ENST00000515475 EIF4G1Q04637 1599 aaKnown RBP54.3■■■■■ 6.28
PRELID2-209ENST00000515475 CECR2Q9BXF3 1484 aa54.17■■■■■ 6.26
PRELID2-209ENST00000515475 NCAPD3P42695 1498 aa52.61■■■■■ 6.01
PRELID2-209ENST00000515475 SMARCA4P51532 1647 aa52.45■■■■■ 5.99
PRELID2-209ENST00000515475 ATAD2BQ9ULI0 1458 aa52.43■■■■■ 5.98
PRELID2-209ENST00000515475 SMARCA2P51531 1590 aa52.38■■■■■ 5.98
PRELID2-209ENST00000515475 HMGXB3Q12766 1538 aa52.29■■■■■ 5.96
PRELID2-209ENST00000515475 BAZ1AQ9NRL2 1556 aaPredicted RBP52.23■■■■■ 5.95
PRELID2-209ENST00000515475 PEG3Q9GZU2 1588 aa52■■■■■ 5.91
PRELID2-209ENST00000515475 ERCC6Q03468 1493 aa51.95■■■■■ 5.91
PRELID2-209ENST00000515475 BAZ1BQ9UIG0 1483 aaKnown RBP51.95■■■■■ 5.91
PRELID2-209ENST00000515475 CUX2O14529 1486 aa51.9■■■■■ 5.9
PRELID2-209ENST00000515475 MROH2BQ7Z745 1585 aa51.74■■■■■ 5.87
PRELID2-209ENST00000515475 NESP48681 1621 aa51.64■■■■■ 5.86
PRELID2-209ENST00000515475 DNAJC5Q9H3Z4 198 aa51.62■■■■■ 5.85
PRELID2-209ENST00000515475 LAMC3Q9Y6N6 1575 aa51.47■■■■■ 5.83
PRELID2-209ENST00000515475 THOC2Q8NI27 1593 aaKnown RBP51.22■■■■■ 5.79
PRELID2-209ENST00000515475 WIZO95785 1651 aa51.15■■■■■ 5.78
PRELID2-209ENST00000515475 PDS5BQ9NTI5 1447 aa51.12■■■■■ 5.77
PRELID2-209ENST00000515475 KIF21AQ7Z4S6 1674 aa51.1■■■■■ 5.77
PRELID2-209ENST00000515475 CADPSQ9ULU8 1353 aa50.98■■■■■ 5.75
PRELID2-209ENST00000515475 RSF1Q96T23 1441 aaPredicted RBP50.7■■■■■ 5.71
PRELID2-209ENST00000515475 MRC2Q9UBG0 1479 aa50.65■■■■■ 5.7
PRELID2-209ENST00000515475 TOP2AP11388 1531 aaKnown RBP50.57■■■■■ 5.69
PRELID2-209ENST00000515475 WDR62O43379 1518 aa50.56■■■■■ 5.68
PRELID2-209ENST00000515475 CEP164Q9UPV0 1460 aa50.48■■■■■ 5.67
PRELID2-209ENST00000515475 CFTRP13569 1480 aa50.45■■■■■ 5.67
PRELID2-209ENST00000515475 FANCD2Q9BXW9 1451 aa50.4■■■■■ 5.66
PRELID2-209ENST00000515475 PRDM2Q13029 1718 aa50.12■■■■■ 5.61
PRELID2-209ENST00000515475 URB2Q14146 1524 aaKnown RBP49.95■■■■■ 5.59
PRELID2-209ENST00000515475 CCDC88BA6NC98 1476 aa49.92■■■■■ 5.58
PRELID2-209ENST00000515475 IFT140Q96RY7 1462 aa49.48■■■■■ 5.51
PRELID2-209ENST00000515475 ABCC8Q09428 1581 aa49.48■■■■■ 5.51
PRELID2-209ENST00000515475 TOPBP1Q92547 1522 aa49.47■■■■■ 5.51
PRELID2-209ENST00000515475 OSCARQ8IYS5 282 aa49.44■■■■■ 5.51
PRELID2-209ENST00000515475 DNMBPQ6XZF7 1577 aa49.35■■■■■ 5.49
PRELID2-209ENST00000515475 TRIM41Q8WV44 630 aa49.31■■■■■ 5.48
PRELID2-209ENST00000515475 ZNF608Q9ULD9 1512 aaPredicted RBP49.28■■■■■ 5.48
PRELID2-209ENST00000515475 EIF4G3O43432 1585 aaKnown RBP49.12■■■■■ 5.45
PRELID2-209ENST00000515475 TARBP1Q13395 1621 aaKnown RBP49.05■■■■■ 5.44
PRELID2-209ENST00000515475 POLA1P09884 1462 aaPredicted RBP48.96■■■■■ 5.43
PRELID2-209ENST00000515475 AQRO60306 1485 aaKnown RBP eCLIP48.85■■■■■ 5.41
PRELID2-209ENST00000515475 RIMBP3CA6NJZ7 1639 aa48.83■■■■■ 5.41
PRELID2-209ENST00000515475 RIMBP3BA6NNM3 1639 aa48.83■■■■■ 5.41
PRELID2-209ENST00000515475 RIMBP3Q9UFD9 1639 aa48.83■■■■■ 5.41
PRELID2-209ENST00000515475 CHD1O14646 1710 aa48.76■■■■■ 5.4
PRELID2-209ENST00000515475 SOGA1O94964 1423 aa48.72■■■■■ 5.39
PRELID2-209ENST00000515475 RAD54L2Q9Y4B4 1467 aa48.71■■■■■ 5.39
PRELID2-209ENST00000515475 WDR97A6NE52 1622 aa48.71■■■■■ 5.39
PRELID2-209ENST00000515475 ARHGEF11O15085 1522 aa48.68■■■■■ 5.38
PRELID2-209ENST00000515475 FGD5Q6ZNL6 1462 aa48.66■■■■■ 5.38
PRELID2-209ENST00000515475 CUX1P39880 1505 aa48.63■■■■■ 5.37
PRELID2-209ENST00000515475 TDRD9Q8NDG6 1382 aaKnown RBP48.54■■■■■ 5.36
PRELID2-209ENST00000515475 FBLN2P98095 1184 aa48.47■■■■■ 5.35
PRELID2-209ENST00000515475 SUPT5HO00267 1087 aaKnown RBP48.41■■■■■ 5.34
PRELID2-209ENST00000515475 SNAPC4Q5SXM2 1469 aa48.41■■■■■ 5.34
PRELID2-209ENST00000515475 MAGI1Q96QZ7 1491 aaPredicted RBP48.36■■■■■ 5.33
PRELID2-209ENST00000515475 GRIN2BQ13224 1484 aa48.34■■■■■ 5.33
PRELID2-209ENST00000515475 PBRM1Q86U86 1689 aa48.21■■■■■ 5.31
PRELID2-209ENST00000515475 CYB5RLQ6IPT4 315 aa48.21■■■■■ 5.31
PRELID2-209ENST00000515475 SYNJ1O43426 1573 aa48.21■■■■■ 5.31
PRELID2-209ENST00000515475 CHMP7Q8WUX9 453 aaPredicted RBP48.19■■■■■ 5.3
PRELID2-209ENST00000515475 CLASP1Q7Z460 1538 aa48.18■■■■■ 5.3
PRELID2-209ENST00000515475 ARAP1Q96P48 1450 aa48.18■■■■■ 5.3
PRELID2-209ENST00000515475 SYNJ2O15056 1496 aa48.17■■■■■ 5.3
PRELID2-209ENST00000515475 ABCA10Q8WWZ4 1543 aa48.17■■■■■ 5.3
PRELID2-209ENST00000515475 GAPVD1Q14C86 1478 aa48.16■■■■■ 5.3
PRELID2-209ENST00000515475 ABCA5Q8WWZ7 1642 aa48.1■■■■■ 5.29
PRELID2-209ENST00000515475 BIVM-ERCC5R4GMW8 1640 aa47.98■■■■■ 5.27
PRELID2-209ENST00000515475 WRNQ14191 1432 aaPredicted RBP eCLIP47.97■■■■■ 5.27
PRELID2-209ENST00000515475 TOP2BQ02880 1626 aa47.95■■■■■ 5.27
PRELID2-209ENST00000515475 ADAMTS12P58397 1594 aa47.73■■■■■ 5.23
PRELID2-209ENST00000515475 GRIN2AQ12879 1464 aa47.71■■■■■ 5.23
PRELID2-209ENST00000515475 TRHP20396 242 aaPredicted RBP47.65■■■■■ 5.22
PRELID2-209ENST00000515475 ERICH3Q5RHP9 1530 aa47.6■■■■■ 5.21
PRELID2-209ENST00000515475 FHAD1B1AJZ9 1412 aa47.57■■■■■ 5.21
PRELID2-209ENST00000515475 NUP160Q12769 1436 aa47.55■■■■■ 5.2
PRELID2-209ENST00000515475 CEP170Q5SW79 1584 aa47.51■■■■■ 5.2
PRELID2-209ENST00000515475 SHROOM2Q13796 1616 aa47.38■■■■■ 5.18
PRELID2-209ENST00000515475 ERCC6L2Q5T890 1561 aa47.33■■■■■ 5.17
PRELID2-209ENST00000515475 RUSC2Q8N2Y8 1516 aa47.05■■■■■ 5.12
PRELID2-209ENST00000515475 PRG4Q92954 1404 aaPredicted RBP47.03■■■■■ 5.12
PRELID2-209ENST00000515475 KIF27Q86VH2 1401 aa46.99■■■■■ 5.11
PRELID2-209ENST00000515475 JPH4Q96JJ6 628 aa46.99■■■■■ 5.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms