RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
SMAD5-209ENST00000514777 ABCC9O60706 1549 aa30.64■■■□□ 2.5
SMAD5-209ENST00000514777 CCDC180Q9P1Z9 1646 aa30.22■■■□□ 2.43
SMAD5-209ENST00000514777 DNAJC5BQ9UF47 199 aa29.22■■■□□ 2.27
SMAD5-209ENST00000514777 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
SMAD5-209ENST00000514777 NACADO15069 1562 aa28.67■■■□□ 2.18
SMAD5-209ENST00000514777 PABPN1Q86U42 306 aaKnown RBP eCLIP28.5■■■□□ 2.15
SMAD5-209ENST00000514777 DCAF8L2P0C7V8 631 aa28.46■■■□□ 2.15
SMAD5-209ENST00000514777 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
SMAD5-209ENST00000514777 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
SMAD5-209ENST00000514777 MYO15BQ96JP2 1530 aa28.14■■■□□ 2.1
SMAD5-209ENST00000514777 ZCCHC6Q5VYS8 1495 aaKnown RBP27.69■■■□□ 2.02
SMAD5-209ENST00000514777 CC2D2AQ9P2K1 1620 aa27.67■■■□□ 2.02
SMAD5-209ENST00000514777 SHROOM4Q9ULL8 1493 aa27.66■■■□□ 2.02
SMAD5-209ENST00000514777 DCAF1Q9Y4B6 1507 aa27.65■■■□□ 2.02
SMAD5-209ENST00000514777 CECR2Q9BXF3 1484 aa27.63■■■□□ 2.01
SMAD5-209ENST00000514777 SCRIBQ14160 1630 aa27.53■■■□□ 2
SMAD5-209ENST00000514777 EIF4G1Q04637 1599 aaKnown RBP27.5■■□□□ 1.99
SMAD5-209ENST00000514777 DNAJC5Q9H3Z4 198 aa27.05■■□□□ 1.92
SMAD5-209ENST00000514777 CUX2O14529 1486 aa26.53■■□□□ 1.84
SMAD5-209ENST00000514777 NCAPD3P42695 1498 aa26.5■■□□□ 1.83
SMAD5-209ENST00000514777 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
SMAD5-209ENST00000514777 ATAD2BQ9ULI0 1458 aa26.36■■□□□ 1.81
SMAD5-209ENST00000514777 NESP48681 1621 aa26.25■■□□□ 1.79
SMAD5-209ENST00000514777 SMARCA4P51532 1647 aa26.23■■□□□ 1.79
SMAD5-209ENST00000514777 HMGXB3Q12766 1538 aa26.23■■□□□ 1.79
SMAD5-209ENST00000514777 SMARCA2P51531 1590 aa26.22■■□□□ 1.79
SMAD5-209ENST00000514777 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
SMAD5-209ENST00000514777 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
SMAD5-209ENST00000514777 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.75
SMAD5-209ENST00000514777 PEG3Q9GZU2 1588 aa25.99■■□□□ 1.75
SMAD5-209ENST00000514777 LAMC3Q9Y6N6 1575 aa25.94■■□□□ 1.74
SMAD5-209ENST00000514777 KIF21AQ7Z4S6 1674 aa25.89■■□□□ 1.73
SMAD5-209ENST00000514777 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
SMAD5-209ENST00000514777 PDS5BQ9NTI5 1447 aa25.78■■□□□ 1.72
SMAD5-209ENST00000514777 CADPSQ9ULU8 1353 aa25.67■■□□□ 1.7
SMAD5-209ENST00000514777 TRIM41Q8WV44 630 aa25.65■■□□□ 1.7
SMAD5-209ENST00000514777 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
SMAD5-209ENST00000514777 WDR62O43379 1518 aa25.56■■□□□ 1.68
SMAD5-209ENST00000514777 WIZO95785 1651 aa25.55■■□□□ 1.68
SMAD5-209ENST00000514777 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
SMAD5-209ENST00000514777 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
SMAD5-209ENST00000514777 CFTRP13569 1480 aa25.3■■□□□ 1.64
SMAD5-209ENST00000514777 OSCARQ8IYS5 282 aa25.29■■□□□ 1.64
SMAD5-209ENST00000514777 URB2Q14146 1524 aaKnown RBP25.22■■□□□ 1.63
SMAD5-209ENST00000514777 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
SMAD5-209ENST00000514777 TOP2AP11388 1531 aaKnown RBP25.12■■□□□ 1.61
SMAD5-209ENST00000514777 RIMBP3CA6NJZ7 1639 aa25.02■■□□□ 1.6
SMAD5-209ENST00000514777 RIMBP3BA6NNM3 1639 aa25.02■■□□□ 1.6
SMAD5-209ENST00000514777 RIMBP3Q9UFD9 1639 aa25.02■■□□□ 1.6
SMAD5-209ENST00000514777 PRDM2Q13029 1718 aa25.02■■□□□ 1.6
SMAD5-209ENST00000514777 ZNF608Q9ULD9 1512 aaPredicted RBP24.98■■□□□ 1.59
SMAD5-209ENST00000514777 IFT140Q96RY7 1462 aa24.92■■□□□ 1.58
SMAD5-209ENST00000514777 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
SMAD5-209ENST00000514777 ARHGEF11O15085 1522 aa24.88■■□□□ 1.57
SMAD5-209ENST00000514777 TOPBP1Q92547 1522 aa24.86■■□□□ 1.57
SMAD5-209ENST00000514777 EIF4G3O43432 1585 aaKnown RBP24.77■■□□□ 1.56
SMAD5-209ENST00000514777 CYB5RLQ6IPT4 315 aa24.74■■□□□ 1.55
SMAD5-209ENST00000514777 ABCC8Q09428 1581 aa24.73■■□□□ 1.55
SMAD5-209ENST00000514777 CHD1O14646 1710 aa24.72■■□□□ 1.55
SMAD5-209ENST00000514777 DNMBPQ6XZF7 1577 aa24.71■■□□□ 1.55
SMAD5-209ENST00000514777 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.54
SMAD5-209ENST00000514777 TARBP1Q13395 1621 aaKnown RBP24.69■■□□□ 1.54
SMAD5-209ENST00000514777 ARAP1Q96P48 1450 aa24.63■■□□□ 1.53
SMAD5-209ENST00000514777 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.52
SMAD5-209ENST00000514777 FBLN2P98095 1184 aa24.56■■□□□ 1.52
SMAD5-209ENST00000514777 TRHP20396 242 aaPredicted RBP24.55■■□□□ 1.52
SMAD5-209ENST00000514777 RAD54L2Q9Y4B4 1467 aa24.52■■□□□ 1.52
SMAD5-209ENST00000514777 TDRD9Q8NDG6 1382 aaKnown RBP24.48■■□□□ 1.51
SMAD5-209ENST00000514777 SOGA1O94964 1423 aa24.45■■□□□ 1.51
SMAD5-209ENST00000514777 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
SMAD5-209ENST00000514777 SNAPC4Q5SXM2 1469 aa24.39■■□□□ 1.5
SMAD5-209ENST00000514777 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
SMAD5-209ENST00000514777 WDR97A6NE52 1622 aa24.33■■□□□ 1.49
SMAD5-209ENST00000514777 CHMP7Q8WUX9 453 aaPredicted RBP24.32■■□□□ 1.48
SMAD5-209ENST00000514777 CUX1P39880 1505 aa24.3■■□□□ 1.48
SMAD5-209ENST00000514777 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
SMAD5-209ENST00000514777 MAGI1Q96QZ7 1491 aaPredicted RBP24.29■■□□□ 1.48
SMAD5-209ENST00000514777 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
SMAD5-209ENST00000514777 SYNJ2O15056 1496 aa24.23■■□□□ 1.47
SMAD5-209ENST00000514777 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
SMAD5-209ENST00000514777 GAPVD1Q14C86 1478 aa24.14■■□□□ 1.46
SMAD5-209ENST00000514777 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
SMAD5-209ENST00000514777 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
SMAD5-209ENST00000514777 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
SMAD5-209ENST00000514777 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
SMAD5-209ENST00000514777 GRIN2AQ12879 1464 aa23.96■■□□□ 1.43
SMAD5-209ENST00000514777 CEP170Q5SW79 1584 aa23.93■■□□□ 1.42
SMAD5-209ENST00000514777 NUP160Q12769 1436 aa23.92■■□□□ 1.42
SMAD5-209ENST00000514777 ADAMTS12P58397 1594 aa23.89■■□□□ 1.41
SMAD5-209ENST00000514777 SHROOM2Q13796 1616 aa23.87■■□□□ 1.41
SMAD5-209ENST00000514777 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
SMAD5-209ENST00000514777 KIF13AQ9H1H9 1805 aa23.82■■□□□ 1.4
SMAD5-209ENST00000514777 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
SMAD5-209ENST00000514777 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
SMAD5-209ENST00000514777 TOP2BQ02880 1626 aa23.79■■□□□ 1.4
SMAD5-209ENST00000514777 SUPT5HO00267 1087 aaKnown RBP23.74■■□□□ 1.39
SMAD5-209ENST00000514777 ERICH3Q5RHP9 1530 aa23.74■■□□□ 1.39
SMAD5-209ENST00000514777 PRG4Q92954 1404 aaPredicted RBP23.71■■□□□ 1.39
SMAD5-209ENST00000514777 JPH4Q96JJ6 628 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms