RNA–Protein interactions for RNA: ENST00000514569.1

CTD-2194D22.4-201, humanhuman

TSL 1 (best) BASIC

Gene CTD-2194D22.4, Length 1,635 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2194D22.4-201ENST00000514569 NISCHQ9Y2I1 1504 aa39.04■■■■□ 3.84
CTD-2194D22.4-201ENST00000514569 ABCC9O60706 1549 aa35.29■■■■□ 3.24
CTD-2194D22.4-201ENST00000514569 CCDC180Q9P1Z9 1646 aa35.04■■■■□ 3.2
CTD-2194D22.4-201ENST00000514569 RB1CC1Q8TDY2 1594 aa33.47■■■□□ 2.95
CTD-2194D22.4-201ENST00000514569 DNAJC5BQ9UF47 199 aa33.26■■■□□ 2.91
CTD-2194D22.4-201ENST00000514569 NACADO15069 1562 aa33.2■■■□□ 2.91
CTD-2194D22.4-201ENST00000514569 DCAF8L2P0C7V8 631 aa33.18■■■□□ 2.9
CTD-2194D22.4-201ENST00000514569 PABPN1Q86U42 306 aaKnown RBP eCLIP32.89■■■□□ 2.86
CTD-2194D22.4-201ENST00000514569 UNC13AQ9UPW8 1703 aa32.69■■■□□ 2.82
CTD-2194D22.4-201ENST00000514569 MYO15BQ96JP2 1530 aa32.66■■■□□ 2.82
CTD-2194D22.4-201ENST00000514569 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
CTD-2194D22.4-201ENST00000514569 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
CTD-2194D22.4-201ENST00000514569 DCAF1Q9Y4B6 1507 aa32.2■■■□□ 2.74
CTD-2194D22.4-201ENST00000514569 SCRIBQ14160 1630 aa31.99■■■□□ 2.71
CTD-2194D22.4-201ENST00000514569 SHROOM4Q9ULL8 1493 aa31.99■■■□□ 2.71
CTD-2194D22.4-201ENST00000514569 CC2D2AQ9P2K1 1620 aa31.83■■■□□ 2.69
CTD-2194D22.4-201ENST00000514569 CECR2Q9BXF3 1484 aa31.79■■■□□ 2.68
CTD-2194D22.4-201ENST00000514569 EIF4G1Q04637 1599 aaKnown RBP31.72■■■□□ 2.67
CTD-2194D22.4-201ENST00000514569 NCAPD3P42695 1498 aa30.67■■■□□ 2.5
CTD-2194D22.4-201ENST00000514569 DNAJC5Q9H3Z4 198 aa30.64■■■□□ 2.5
CTD-2194D22.4-201ENST00000514569 ATAD2BQ9ULI0 1458 aa30.57■■■□□ 2.48
CTD-2194D22.4-201ENST00000514569 ERCC6Q03468 1493 aa30.49■■■□□ 2.47
CTD-2194D22.4-201ENST00000514569 SMARCA4P51532 1647 aa30.47■■■□□ 2.47
CTD-2194D22.4-201ENST00000514569 SMARCA2P51531 1590 aa30.46■■■□□ 2.47
CTD-2194D22.4-201ENST00000514569 CUX2O14529 1486 aa30.43■■■□□ 2.46
CTD-2194D22.4-201ENST00000514569 HMGXB3Q12766 1538 aa30.39■■■□□ 2.46
CTD-2194D22.4-201ENST00000514569 BAZ1AQ9NRL2 1556 aaPredicted RBP30.31■■■□□ 2.44
CTD-2194D22.4-201ENST00000514569 BAZ1BQ9UIG0 1483 aaKnown RBP30.27■■■□□ 2.44
CTD-2194D22.4-201ENST00000514569 NESP48681 1621 aa30.26■■■□□ 2.44
CTD-2194D22.4-201ENST00000514569 PEG3Q9GZU2 1588 aa30.14■■■□□ 2.42
CTD-2194D22.4-201ENST00000514569 MROH2BQ7Z745 1585 aa30.1■■■□□ 2.41
CTD-2194D22.4-201ENST00000514569 LAMC3Q9Y6N6 1575 aa29.98■■■□□ 2.39
CTD-2194D22.4-201ENST00000514569 THOC2Q8NI27 1593 aaKnown RBP29.92■■■□□ 2.38
CTD-2194D22.4-201ENST00000514569 PDS5BQ9NTI5 1447 aa29.86■■■□□ 2.37
CTD-2194D22.4-201ENST00000514569 KIF21AQ7Z4S6 1674 aa29.83■■■□□ 2.37
CTD-2194D22.4-201ENST00000514569 CADPSQ9ULU8 1353 aa29.76■■■□□ 2.35
CTD-2194D22.4-201ENST00000514569 WIZO95785 1651 aa29.73■■■□□ 2.35
CTD-2194D22.4-201ENST00000514569 MRC2Q9UBG0 1479 aa29.59■■■□□ 2.33
CTD-2194D22.4-201ENST00000514569 WDR62O43379 1518 aa29.49■■■□□ 2.31
CTD-2194D22.4-201ENST00000514569 CEP164Q9UPV0 1460 aa29.45■■■□□ 2.3
CTD-2194D22.4-201ENST00000514569 RSF1Q96T23 1441 aaPredicted RBP29.43■■■□□ 2.3
CTD-2194D22.4-201ENST00000514569 FANCD2Q9BXW9 1451 aa29.41■■■□□ 2.3
CTD-2194D22.4-201ENST00000514569 CFTRP13569 1480 aa29.36■■■□□ 2.29
CTD-2194D22.4-201ENST00000514569 TOP2AP11388 1531 aaKnown RBP29.32■■■□□ 2.28
CTD-2194D22.4-201ENST00000514569 TRIM41Q8WV44 630 aa29.3■■■□□ 2.28
CTD-2194D22.4-201ENST00000514569 URB2Q14146 1524 aaKnown RBP29.17■■■□□ 2.26
CTD-2194D22.4-201ENST00000514569 OSCARQ8IYS5 282 aa29.1■■■□□ 2.25
CTD-2194D22.4-201ENST00000514569 CCDC88BA6NC98 1476 aa29.03■■■□□ 2.24
CTD-2194D22.4-201ENST00000514569 PRDM2Q13029 1718 aa29■■■□□ 2.23
CTD-2194D22.4-201ENST00000514569 IFT140Q96RY7 1462 aa28.87■■■□□ 2.21
CTD-2194D22.4-201ENST00000514569 ZNF608Q9ULD9 1512 aaPredicted RBP28.85■■■□□ 2.21
CTD-2194D22.4-201ENST00000514569 TOPBP1Q92547 1522 aa28.83■■■□□ 2.21
CTD-2194D22.4-201ENST00000514569 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
CTD-2194D22.4-201ENST00000514569 DNMBPQ6XZF7 1577 aa28.7■■■□□ 2.18
CTD-2194D22.4-201ENST00000514569 RIMBP3CA6NJZ7 1639 aa28.66■■■□□ 2.18
CTD-2194D22.4-201ENST00000514569 RIMBP3BA6NNM3 1639 aa28.66■■■□□ 2.18
CTD-2194D22.4-201ENST00000514569 RIMBP3Q9UFD9 1639 aa28.66■■■□□ 2.18
CTD-2194D22.4-201ENST00000514569 EIF4G3O43432 1585 aaKnown RBP28.65■■■□□ 2.18
CTD-2194D22.4-201ENST00000514569 AQRO60306 1485 aaKnown RBP eCLIP28.59■■■□□ 2.17
CTD-2194D22.4-201ENST00000514569 ARHGEF11O15085 1522 aa28.56■■■□□ 2.16
CTD-2194D22.4-201ENST00000514569 TARBP1Q13395 1621 aaKnown RBP28.56■■■□□ 2.16
CTD-2194D22.4-201ENST00000514569 POLA1P09884 1462 aaPredicted RBP28.53■■■□□ 2.16
CTD-2194D22.4-201ENST00000514569 FBLN2P98095 1184 aa28.51■■■□□ 2.15
CTD-2194D22.4-201ENST00000514569 CHD1O14646 1710 aa28.47■■■□□ 2.15
CTD-2194D22.4-201ENST00000514569 RAD54L2Q9Y4B4 1467 aa28.47■■■□□ 2.15
CTD-2194D22.4-201ENST00000514569 CYB5RLQ6IPT4 315 aa28.46■■■□□ 2.15
CTD-2194D22.4-201ENST00000514569 SOGA1O94964 1423 aa28.44■■■□□ 2.14
CTD-2194D22.4-201ENST00000514569 TDRD9Q8NDG6 1382 aaKnown RBP28.41■■■□□ 2.14
CTD-2194D22.4-201ENST00000514569 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
CTD-2194D22.4-201ENST00000514569 SNAPC4Q5SXM2 1469 aa28.28■■■□□ 2.12
CTD-2194D22.4-201ENST00000514569 ARAP1Q96P48 1450 aa28.28■■■□□ 2.12
CTD-2194D22.4-201ENST00000514569 CUX1P39880 1505 aa28.27■■■□□ 2.12
CTD-2194D22.4-201ENST00000514569 CHMP7Q8WUX9 453 aaPredicted RBP28.25■■■□□ 2.11
CTD-2194D22.4-201ENST00000514569 WDR97A6NE52 1622 aa28.23■■■□□ 2.11
CTD-2194D22.4-201ENST00000514569 TRHP20396 242 aaPredicted RBP28.21■■■□□ 2.11
CTD-2194D22.4-201ENST00000514569 GRIN2BQ13224 1484 aa28.17■■■□□ 2.1
CTD-2194D22.4-201ENST00000514569 MAGI1Q96QZ7 1491 aaPredicted RBP28.17■■■□□ 2.1
CTD-2194D22.4-201ENST00000514569 SUPT5HO00267 1087 aaKnown RBP28.14■■■□□ 2.09
CTD-2194D22.4-201ENST00000514569 SYNJ1O43426 1573 aa28.12■■■□□ 2.09
CTD-2194D22.4-201ENST00000514569 CLASP1Q7Z460 1538 aa28.12■■■□□ 2.09
CTD-2194D22.4-201ENST00000514569 SYNJ2O15056 1496 aa28.09■■■□□ 2.09
CTD-2194D22.4-201ENST00000514569 GAPVD1Q14C86 1478 aa28.07■■■□□ 2.08
CTD-2194D22.4-201ENST00000514569 PBRM1Q86U86 1689 aa28.02■■■□□ 2.08
CTD-2194D22.4-201ENST00000514569 ABCA10Q8WWZ4 1543 aa27.99■■■□□ 2.07
CTD-2194D22.4-201ENST00000514569 ABCA5Q8WWZ7 1642 aa27.94■■■□□ 2.06
CTD-2194D22.4-201ENST00000514569 WRNQ14191 1432 aaPredicted RBP eCLIP27.88■■■□□ 2.05
CTD-2194D22.4-201ENST00000514569 GRIN2AQ12879 1464 aa27.8■■■□□ 2.04
CTD-2194D22.4-201ENST00000514569 TOP2BQ02880 1626 aa27.76■■■□□ 2.04
CTD-2194D22.4-201ENST00000514569 BIVM-ERCC5R4GMW8 1640 aa27.76■■■□□ 2.03
CTD-2194D22.4-201ENST00000514569 ADAMTS12P58397 1594 aa27.74■■■□□ 2.03
CTD-2194D22.4-201ENST00000514569 ERCC6L2Q5T890 1561 aa27.71■■■□□ 2.03
CTD-2194D22.4-201ENST00000514569 CEP170Q5SW79 1584 aa27.71■■■□□ 2.03
CTD-2194D22.4-201ENST00000514569 FHAD1B1AJZ9 1412 aa27.7■■■□□ 2.03
CTD-2194D22.4-201ENST00000514569 NUP160Q12769 1436 aa27.7■■■□□ 2.03
CTD-2194D22.4-201ENST00000514569 ERICH3Q5RHP9 1530 aa27.62■■■□□ 2.01
CTD-2194D22.4-201ENST00000514569 SHROOM2Q13796 1616 aa27.57■■■□□ 2
CTD-2194D22.4-201ENST00000514569 JPH4Q96JJ6 628 aa27.5■■□□□ 1.99
CTD-2194D22.4-201ENST00000514569 PRG4Q92954 1404 aaPredicted RBP27.5■■□□□ 1.99
CTD-2194D22.4-201ENST00000514569 AEBP2Q6ZN18 517 aaPredicted RBP27.49■■□□□ 1.99
CTD-2194D22.4-201ENST00000514569 RUSC2Q8N2Y8 1516 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms