RNA–Protein interactions for RNA: ENST00000514426.1

TSC22D3-216, Transcript of TSC22 domain family member 3, humanhuman

TSL 5 BASIC

Gene TSC22D3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-216ENST00000514426 NISCHQ9Y2I1 1504 aa24.06■■□□□ 1.44
TSC22D3-216ENST00000514426 CCDC180Q9P1Z9 1646 aa21.43■■□□□ 1.02
TSC22D3-216ENST00000514426 ABCC9O60706 1549 aa20.42■□□□□ 0.86
TSC22D3-216ENST00000514426 ZCCHC6Q5VYS8 1495 aaKnown RBP20.13■□□□□ 0.81
TSC22D3-216ENST00000514426 MYO15BQ96JP2 1530 aa20.11■□□□□ 0.81
TSC22D3-216ENST00000514426 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
TSC22D3-216ENST00000514426 NACADO15069 1562 aa20.03■□□□□ 0.8
TSC22D3-216ENST00000514426 RB1CC1Q8TDY2 1594 aa19.95■□□□□ 0.78
TSC22D3-216ENST00000514426 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
TSC22D3-216ENST00000514426 UNC13AQ9UPW8 1703 aa19.47■□□□□ 0.71
TSC22D3-216ENST00000514426 SHROOM4Q9ULL8 1493 aa19.34■□□□□ 0.69
TSC22D3-216ENST00000514426 SCRIBQ14160 1630 aa19.33■□□□□ 0.69
TSC22D3-216ENST00000514426 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.68
TSC22D3-216ENST00000514426 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
TSC22D3-216ENST00000514426 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
TSC22D3-216ENST00000514426 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
TSC22D3-216ENST00000514426 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
TSC22D3-216ENST00000514426 SMARCA4P51532 1647 aa18.63■□□□□ 0.57
TSC22D3-216ENST00000514426 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.57
TSC22D3-216ENST00000514426 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
TSC22D3-216ENST00000514426 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
TSC22D3-216ENST00000514426 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
TSC22D3-216ENST00000514426 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
TSC22D3-216ENST00000514426 NCAPD3P42695 1498 aa18.44■□□□□ 0.54
TSC22D3-216ENST00000514426 ATAD2BQ9ULI0 1458 aa18.42■□□□□ 0.54
TSC22D3-216ENST00000514426 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
TSC22D3-216ENST00000514426 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
TSC22D3-216ENST00000514426 WIZO95785 1651 aa18.28■□□□□ 0.52
TSC22D3-216ENST00000514426 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
TSC22D3-216ENST00000514426 TOP2AP11388 1531 aaKnown RBP18.21■□□□□ 0.51
TSC22D3-216ENST00000514426 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
TSC22D3-216ENST00000514426 CCDC88BA6NC98 1476 aa17.89■□□□□ 0.45
TSC22D3-216ENST00000514426 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.45
TSC22D3-216ENST00000514426 PRDM2Q13029 1718 aa17.85■□□□□ 0.45
TSC22D3-216ENST00000514426 CADPSQ9ULU8 1353 aa17.85■□□□□ 0.45
TSC22D3-216ENST00000514426 CFTRP13569 1480 aa17.84■□□□□ 0.45
TSC22D3-216ENST00000514426 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
TSC22D3-216ENST00000514426 NESP48681 1621 aa17.73■□□□□ 0.43
TSC22D3-216ENST00000514426 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.42
TSC22D3-216ENST00000514426 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
TSC22D3-216ENST00000514426 DNAJC5Q9H3Z4 198 aa17.63■□□□□ 0.41
TSC22D3-216ENST00000514426 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
TSC22D3-216ENST00000514426 CEP164Q9UPV0 1460 aa17.62■□□□□ 0.41
TSC22D3-216ENST00000514426 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
TSC22D3-216ENST00000514426 MRC2Q9UBG0 1479 aa17.55■□□□□ 0.4
TSC22D3-216ENST00000514426 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
TSC22D3-216ENST00000514426 WDR62O43379 1518 aa17.52■□□□□ 0.39
TSC22D3-216ENST00000514426 CUX2O14529 1486 aa17.5■□□□□ 0.39
TSC22D3-216ENST00000514426 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
TSC22D3-216ENST00000514426 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
TSC22D3-216ENST00000514426 TOPBP1Q92547 1522 aa17.39■□□□□ 0.37
TSC22D3-216ENST00000514426 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
TSC22D3-216ENST00000514426 TOP2BQ02880 1626 aa17.33■□□□□ 0.37
TSC22D3-216ENST00000514426 WRNQ14191 1432 aaPredicted RBP eCLIP17.33■□□□□ 0.36
TSC22D3-216ENST00000514426 CUX1P39880 1505 aa17.32■□□□□ 0.36
TSC22D3-216ENST00000514426 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
TSC22D3-216ENST00000514426 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
TSC22D3-216ENST00000514426 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
TSC22D3-216ENST00000514426 SYNJ1O43426 1573 aa17.25■□□□□ 0.35
TSC22D3-216ENST00000514426 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
TSC22D3-216ENST00000514426 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
TSC22D3-216ENST00000514426 SOGA1O94964 1423 aa17.16■□□□□ 0.34
TSC22D3-216ENST00000514426 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
TSC22D3-216ENST00000514426 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
TSC22D3-216ENST00000514426 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
TSC22D3-216ENST00000514426 RAD54L2Q9Y4B4 1467 aa17.07■□□□□ 0.32
TSC22D3-216ENST00000514426 ZNF608Q9ULD9 1512 aaPredicted RBP17.03■□□□□ 0.32
TSC22D3-216ENST00000514426 PBRM1Q86U86 1689 aa17■□□□□ 0.31
TSC22D3-216ENST00000514426 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
TSC22D3-216ENST00000514426 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
TSC22D3-216ENST00000514426 ERICH3Q5RHP9 1530 aa16.99■□□□□ 0.31
TSC22D3-216ENST00000514426 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
TSC22D3-216ENST00000514426 KIF27Q86VH2 1401 aa16.97■□□□□ 0.31
TSC22D3-216ENST00000514426 MAGI1Q96QZ7 1491 aaPredicted RBP16.97■□□□□ 0.31
TSC22D3-216ENST00000514426 AQRO60306 1485 aaKnown RBP eCLIP16.95■□□□□ 0.3
TSC22D3-216ENST00000514426 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
TSC22D3-216ENST00000514426 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
TSC22D3-216ENST00000514426 EEA1Q15075 1411 aa16.93■□□□□ 0.3
TSC22D3-216ENST00000514426 CUL7Q14999 1698 aa16.91■□□□□ 0.3
TSC22D3-216ENST00000514426 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
TSC22D3-216ENST00000514426 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
TSC22D3-216ENST00000514426 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
TSC22D3-216ENST00000514426 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
TSC22D3-216ENST00000514426 IGF1RP08069 1367 aa16.81■□□□□ 0.28
TSC22D3-216ENST00000514426 CHD1O14646 1710 aa16.8■□□□□ 0.28
TSC22D3-216ENST00000514426 GRIN2AQ12879 1464 aa16.76■□□□□ 0.27
TSC22D3-216ENST00000514426 RUSC2Q8N2Y8 1516 aa16.74■□□□□ 0.27
TSC22D3-216ENST00000514426 CARMIL1Q5VZK9 1371 aa16.73■□□□□ 0.27
TSC22D3-216ENST00000514426 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
TSC22D3-216ENST00000514426 CHMP7Q8WUX9 453 aaPredicted RBP16.71■□□□□ 0.27
TSC22D3-216ENST00000514426 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
TSC22D3-216ENST00000514426 NUP160Q12769 1436 aa16.7■□□□□ 0.26
TSC22D3-216ENST00000514426 KIF21BO75037 1637 aa16.69■□□□□ 0.26
TSC22D3-216ENST00000514426 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
TSC22D3-216ENST00000514426 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
TSC22D3-216ENST00000514426 OSCARQ8IYS5 282 aa16.67■□□□□ 0.26
TSC22D3-216ENST00000514426 CEP170Q5SW79 1584 aa16.64■□□□□ 0.25
TSC22D3-216ENST00000514426 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
TSC22D3-216ENST00000514426 CTTNBP2Q8WZ74 1663 aa16.6■□□□□ 0.25
TSC22D3-216ENST00000514426 FBLN2P98095 1184 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms