RNA–Protein interactions for RNA: ENST00000514382.5

CCND3-220, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-220ENST00000514382 NISCHQ9Y2I1 1504 aa34.34■■■■□ 3.09
CCND3-220ENST00000514382 ABCC9O60706 1549 aa31.04■■■□□ 2.56
CCND3-220ENST00000514382 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
CCND3-220ENST00000514382 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
CCND3-220ENST00000514382 DNAJC5BQ9UF47 199 aa29.36■■■□□ 2.29
CCND3-220ENST00000514382 NACADO15069 1562 aa29.13■■■□□ 2.25
CCND3-220ENST00000514382 UNC13AQ9UPW8 1703 aa29■■■□□ 2.23
CCND3-220ENST00000514382 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
CCND3-220ENST00000514382 PABPN1Q86U42 306 aaKnown RBP eCLIP28.89■■■□□ 2.22
CCND3-220ENST00000514382 BICRAQ9NZM4 1560 aa28.73■■■□□ 2.19
CCND3-220ENST00000514382 MYO15BQ96JP2 1530 aa28.63■■■□□ 2.17
CCND3-220ENST00000514382 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.14
CCND3-220ENST00000514382 DCAF1Q9Y4B6 1507 aa28.27■■■□□ 2.12
CCND3-220ENST00000514382 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
CCND3-220ENST00000514382 CC2D2AQ9P2K1 1620 aa28.04■■■□□ 2.08
CCND3-220ENST00000514382 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
CCND3-220ENST00000514382 EIF4G1Q04637 1599 aaKnown RBP27.92■■■□□ 2.06
CCND3-220ENST00000514382 CECR2Q9BXF3 1484 aa27.9■■■□□ 2.06
CCND3-220ENST00000514382 NCAPD3P42695 1498 aa26.91■■□□□ 1.9
CCND3-220ENST00000514382 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
CCND3-220ENST00000514382 SMARCA4P51532 1647 aa26.85■■□□□ 1.89
CCND3-220ENST00000514382 DNAJC5Q9H3Z4 198 aa26.84■■□□□ 1.89
CCND3-220ENST00000514382 NESP48681 1621 aa26.72■■□□□ 1.87
CCND3-220ENST00000514382 HMGXB3Q12766 1538 aa26.7■■□□□ 1.87
CCND3-220ENST00000514382 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
CCND3-220ENST00000514382 ERCC6Q03468 1493 aa26.66■■□□□ 1.86
CCND3-220ENST00000514382 CUX2O14529 1486 aa26.65■■□□□ 1.86
CCND3-220ENST00000514382 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
CCND3-220ENST00000514382 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
CCND3-220ENST00000514382 BAZ1BQ9UIG0 1483 aaKnown RBP26.54■■□□□ 1.84
CCND3-220ENST00000514382 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
CCND3-220ENST00000514382 THOC2Q8NI27 1593 aaKnown RBP26.43■■□□□ 1.82
CCND3-220ENST00000514382 KIF21AQ7Z4S6 1674 aa26.37■■□□□ 1.81
CCND3-220ENST00000514382 LAMC3Q9Y6N6 1575 aa26.31■■□□□ 1.8
CCND3-220ENST00000514382 WIZO95785 1651 aa26.27■■□□□ 1.8
CCND3-220ENST00000514382 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
CCND3-220ENST00000514382 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
CCND3-220ENST00000514382 MRC2Q9UBG0 1479 aa25.97■■□□□ 1.75
CCND3-220ENST00000514382 WDR62O43379 1518 aa25.95■■□□□ 1.74
CCND3-220ENST00000514382 RSF1Q96T23 1441 aaPredicted RBP25.88■■□□□ 1.73
CCND3-220ENST00000514382 FANCD2Q9BXW9 1451 aa25.82■■□□□ 1.72
CCND3-220ENST00000514382 CEP164Q9UPV0 1460 aa25.82■■□□□ 1.72
CCND3-220ENST00000514382 TOP2AP11388 1531 aaKnown RBP25.79■■□□□ 1.72
CCND3-220ENST00000514382 CFTRP13569 1480 aa25.79■■□□□ 1.72
CCND3-220ENST00000514382 URB2Q14146 1524 aaKnown RBP25.72■■□□□ 1.71
CCND3-220ENST00000514382 TRIM41Q8WV44 630 aa25.63■■□□□ 1.69
CCND3-220ENST00000514382 PRDM2Q13029 1718 aa25.62■■□□□ 1.69
CCND3-220ENST00000514382 CCDC88BA6NC98 1476 aa25.54■■□□□ 1.68
CCND3-220ENST00000514382 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
CCND3-220ENST00000514382 OSCARQ8IYS5 282 aa25.37■■□□□ 1.65
CCND3-220ENST00000514382 TOPBP1Q92547 1522 aa25.36■■□□□ 1.65
CCND3-220ENST00000514382 IFT140Q96RY7 1462 aa25.28■■□□□ 1.64
CCND3-220ENST00000514382 RIMBP3CA6NJZ7 1639 aa25.27■■□□□ 1.64
CCND3-220ENST00000514382 RIMBP3BA6NNM3 1639 aa25.27■■□□□ 1.64
CCND3-220ENST00000514382 RIMBP3Q9UFD9 1639 aa25.27■■□□□ 1.64
CCND3-220ENST00000514382 EIF4G3O43432 1585 aaKnown RBP25.25■■□□□ 1.63
CCND3-220ENST00000514382 DNMBPQ6XZF7 1577 aa25.22■■□□□ 1.63
CCND3-220ENST00000514382 TARBP1Q13395 1621 aaKnown RBP25.2■■□□□ 1.62
CCND3-220ENST00000514382 CHD1O14646 1710 aa25.16■■□□□ 1.62
CCND3-220ENST00000514382 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.616e-7■■■■■ 37.8
CCND3-220ENST00000514382 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
CCND3-220ENST00000514382 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
CCND3-220ENST00000514382 ABCC8Q09428 1581 aa25.09■■□□□ 1.61
CCND3-220ENST00000514382 RAD54L2Q9Y4B4 1467 aa25.07■■□□□ 1.6
CCND3-220ENST00000514382 TDRD9Q8NDG6 1382 aaKnown RBP24.94■■□□□ 1.58
CCND3-220ENST00000514382 CUX1P39880 1505 aa24.94■■□□□ 1.58
CCND3-220ENST00000514382 FGD5Q6ZNL6 1462 aa24.92■■□□□ 1.58
CCND3-220ENST00000514382 ARAP1Q96P48 1450 aa24.91■■□□□ 1.58
CCND3-220ENST00000514382 SOGA1O94964 1423 aa24.9■■□□□ 1.58
CCND3-220ENST00000514382 CYB5RLQ6IPT4 315 aa24.88■■□□□ 1.57
CCND3-220ENST00000514382 FBLN2P98095 1184 aa24.87■■□□□ 1.57
CCND3-220ENST00000514382 SNAPC4Q5SXM2 1469 aa24.85■■□□□ 1.57
CCND3-220ENST00000514382 WDR97A6NE52 1622 aa24.84■■□□□ 1.57
CCND3-220ENST00000514382 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
CCND3-220ENST00000514382 PBRM1Q86U86 1689 aa24.74■■□□□ 1.55
CCND3-220ENST00000514382 GRIN2BQ13224 1484 aa24.68■■□□□ 1.54
CCND3-220ENST00000514382 MAGI1Q96QZ7 1491 aaPredicted RBP24.68■■□□□ 1.54
CCND3-220ENST00000514382 ABCA5Q8WWZ7 1642 aa24.64■■□□□ 1.54
CCND3-220ENST00000514382 SYNJ1O43426 1573 aa24.64■■□□□ 1.54
CCND3-220ENST00000514382 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
CCND3-220ENST00000514382 SUPT5HO00267 1087 aaKnown RBP24.61■■□□□ 1.53
CCND3-220ENST00000514382 CHMP7Q8WUX9 453 aaPredicted RBP24.61■■□□□ 1.53
CCND3-220ENST00000514382 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
CCND3-220ENST00000514382 ABCA10Q8WWZ4 1543 aa24.58■■□□□ 1.53
CCND3-220ENST00000514382 TRHP20396 242 aaPredicted RBP24.57■■□□□ 1.52
CCND3-220ENST00000514382 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
CCND3-220ENST00000514382 BIVM-ERCC5R4GMW8 1640 aa24.48■■□□□ 1.51
CCND3-220ENST00000514382 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
CCND3-220ENST00000514382 CEP170Q5SW79 1584 aa24.44■■□□□ 1.5
CCND3-220ENST00000514382 TOP2BQ02880 1626 aa24.43■■□□□ 1.5
CCND3-220ENST00000514382 GRIN2AQ12879 1464 aa24.41■■□□□ 1.5
CCND3-220ENST00000514382 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.499e-6■■■■■ 50.1
CCND3-220ENST00000514382 NUP160Q12769 1436 aa24.35■■□□□ 1.49
CCND3-220ENST00000514382 SHROOM2Q13796 1616 aa24.32■■□□□ 1.48
CCND3-220ENST00000514382 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
CCND3-220ENST00000514382 ERICH3Q5RHP9 1530 aa24.23■■□□□ 1.47
CCND3-220ENST00000514382 KIF13AQ9H1H9 1805 aa24.14■■□□□ 1.46
CCND3-220ENST00000514382 RUSC2Q8N2Y8 1516 aa24.11■■□□□ 1.45
CCND3-220ENST00000514382 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
CCND3-220ENST00000514382 JPH4Q96JJ6 628 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms