RNA–Protein interactions for RNA: ENST00000514283.1

MGAT1-223, Transcript of mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, humanhuman

TSL 2

Gene MGAT1, Length 619 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MGAT1-223ENST00000514283 NISCHQ9Y2I1 1504 aa49.16■■■■■ 5.46
MGAT1-223ENST00000514283 CCDC180Q9P1Z9 1646 aa44.07■■■■■ 4.65
MGAT1-223ENST00000514283 ABCC9O60706 1549 aa43.79■■■■■ 4.6
MGAT1-223ENST00000514283 RB1CC1Q8TDY2 1594 aa41.85■■■■■ 4.29
MGAT1-223ENST00000514283 NACADO15069 1562 aa41.6■■■■■ 4.25
MGAT1-223ENST00000514283 DCAF8L2P0C7V8 631 aa41.47■■■■■ 4.23
MGAT1-223ENST00000514283 MYO15BQ96JP2 1530 aa41.09■■■■■ 4.17
MGAT1-223ENST00000514283 UNC13AQ9UPW8 1703 aa40.84■■■■■ 4.13
MGAT1-223ENST00000514283 ZCCHC6Q5VYS8 1495 aaKnown RBP40.79■■■■■ 4.12
MGAT1-223ENST00000514283 PABPN1Q86U42 306 aaKnown RBP eCLIP40.79■■■■■ 4.12
MGAT1-223ENST00000514283 DNAJC5BQ9UF47 199 aa40.77■■■■■ 4.12
MGAT1-223ENST00000514283 DCAF1Q9Y4B6 1507 aa40.64■■■■■ 4.1
MGAT1-223ENST00000514283 BICRAQ9NZM4 1560 aa40.52■■■■■ 4.08
MGAT1-223ENST00000514283 SCRIBQ14160 1630 aa40.14■■■■■ 4.02
MGAT1-223ENST00000514283 SHROOM4Q9ULL8 1493 aa40.11■■■■■ 4.01
MGAT1-223ENST00000514283 CC2D2AQ9P2K1 1620 aa39.58■■■■□ 3.93
MGAT1-223ENST00000514283 EIF4G1Q04637 1599 aaKnown RBP39.55■■■■□ 3.92
MGAT1-223ENST00000514283 CECR2Q9BXF3 1484 aa39.44■■■■□ 3.9
MGAT1-223ENST00000514283 NCAPD3P42695 1498 aa38.36■■■■□ 3.73
MGAT1-223ENST00000514283 SMARCA4P51532 1647 aa38.32■■■■□ 3.73
MGAT1-223ENST00000514283 ATAD2BQ9ULI0 1458 aa38.27■■■■□ 3.72
MGAT1-223ENST00000514283 SMARCA2P51531 1590 aa38.25■■■■□ 3.71
MGAT1-223ENST00000514283 BAZ1AQ9NRL2 1556 aaPredicted RBP38.19■■■■□ 3.7
MGAT1-223ENST00000514283 HMGXB3Q12766 1538 aa38.13■■■■□ 3.69
MGAT1-223ENST00000514283 BAZ1BQ9UIG0 1483 aaKnown RBP37.97■■■■□ 3.67
MGAT1-223ENST00000514283 PEG3Q9GZU2 1588 aa37.93■■■■□ 3.66
MGAT1-223ENST00000514283 ERCC6Q03468 1493 aa37.87■■■■□ 3.65
MGAT1-223ENST00000514283 MROH2BQ7Z745 1585 aa37.86■■■■□ 3.65
MGAT1-223ENST00000514283 CUX2O14529 1486 aa37.7■■■■□ 3.63
MGAT1-223ENST00000514283 NESP48681 1621 aa37.65■■■■□ 3.62
MGAT1-223ENST00000514283 LAMC3Q9Y6N6 1575 aa37.51■■■■□ 3.6
MGAT1-223ENST00000514283 WIZO95785 1651 aa37.44■■■■□ 3.58
MGAT1-223ENST00000514283 DNAJC5Q9H3Z4 198 aa37.35■■■■□ 3.57
MGAT1-223ENST00000514283 PDS5BQ9NTI5 1447 aa37.3■■■■□ 3.56
MGAT1-223ENST00000514283 THOC2Q8NI27 1593 aaKnown RBP37.25■■■■□ 3.55
MGAT1-223ENST00000514283 KIF21AQ7Z4S6 1674 aa37.23■■■■□ 3.55
MGAT1-223ENST00000514283 CADPSQ9ULU8 1353 aa37.22■■■■□ 3.55
MGAT1-223ENST00000514283 RSF1Q96T23 1441 aaPredicted RBP37.17■■■■□ 3.54
MGAT1-223ENST00000514283 TOP2AP11388 1531 aaKnown RBP37.01■■■■□ 3.52
MGAT1-223ENST00000514283 MRC2Q9UBG0 1479 aa36.93■■■■□ 3.5
MGAT1-223ENST00000514283 CEP164Q9UPV0 1460 aa36.86■■■■□ 3.49
MGAT1-223ENST00000514283 CFTRP13569 1480 aa36.84■■■■□ 3.49
MGAT1-223ENST00000514283 FANCD2Q9BXW9 1451 aa36.82■■■■□ 3.48
MGAT1-223ENST00000514283 WDR62O43379 1518 aa36.81■■■■□ 3.48
MGAT1-223ENST00000514283 PRDM2Q13029 1718 aa36.56■■■■□ 3.44
MGAT1-223ENST00000514283 CCDC88BA6NC98 1476 aa36.56■■■■□ 3.44
MGAT1-223ENST00000514283 URB2Q14146 1524 aaKnown RBP36.45■■■■□ 3.43
MGAT1-223ENST00000514283 ABCC8Q09428 1581 aa36.15■■■■□ 3.38
MGAT1-223ENST00000514283 TOPBP1Q92547 1522 aa36.13■■■■□ 3.37
MGAT1-223ENST00000514283 IFT140Q96RY7 1462 aa36.11■■■■□ 3.37
MGAT1-223ENST00000514283 DNMBPQ6XZF7 1577 aa36.04■■■■□ 3.36
MGAT1-223ENST00000514283 OSCARQ8IYS5 282 aa36.03■■■■□ 3.36
MGAT1-223ENST00000514283 ZNF608Q9ULD9 1512 aaPredicted RBP35.95■■■■□ 3.35
MGAT1-223ENST00000514283 TRIM41Q8WV44 630 aa35.86■■■■□ 3.33
MGAT1-223ENST00000514283 EIF4G3O43432 1585 aaKnown RBP35.82■■■■□ 3.32
MGAT1-223ENST00000514283 TARBP1Q13395 1621 aaKnown RBP35.77■■■■□ 3.32
MGAT1-223ENST00000514283 POLA1P09884 1462 aaPredicted RBP35.77■■■■□ 3.32
MGAT1-223ENST00000514283 SUPT5HO00267 1087 aaKnown RBP35.76■■■■□ 3.32
MGAT1-223ENST00000514283 AQRO60306 1485 aaKnown RBP eCLIP35.67■■■■□ 3.3
MGAT1-223ENST00000514283 SOGA1O94964 1423 aa35.64■■■■□ 3.3
MGAT1-223ENST00000514283 RAD54L2Q9Y4B4 1467 aa35.61■■■■□ 3.29
MGAT1-223ENST00000514283 FGD5Q6ZNL6 1462 aa35.59■■■■□ 3.29
MGAT1-223ENST00000514283 CUX1P39880 1505 aa35.57■■■■□ 3.28
MGAT1-223ENST00000514283 CHD1O14646 1710 aa35.52■■■■□ 3.28
MGAT1-223ENST00000514283 TDRD9Q8NDG6 1382 aaKnown RBP35.51■■■■□ 3.27
MGAT1-223ENST00000514283 WDR97A6NE52 1622 aa35.5■■■■□ 3.27
MGAT1-223ENST00000514283 RIMBP3CA6NJZ7 1639 aa35.49■■■■□ 3.27
MGAT1-223ENST00000514283 RIMBP3BA6NNM3 1639 aa35.49■■■■□ 3.27
MGAT1-223ENST00000514283 RIMBP3Q9UFD9 1639 aa35.49■■■■□ 3.27
MGAT1-223ENST00000514283 FBLN2P98095 1184 aa35.48■■■■□ 3.27
MGAT1-223ENST00000514283 ARHGEF11O15085 1522 aa35.4■■■■□ 3.26
MGAT1-223ENST00000514283 SNAPC4Q5SXM2 1469 aa35.35■■■■□ 3.25
MGAT1-223ENST00000514283 GRIN2BQ13224 1484 aa35.31■■■■□ 3.24
MGAT1-223ENST00000514283 MAGI1Q96QZ7 1491 aaPredicted RBP35.3■■■■□ 3.24
MGAT1-223ENST00000514283 CHMP7Q8WUX9 453 aaPredicted RBP35.26■■■■□ 3.24
MGAT1-223ENST00000514283 GAPVD1Q14C86 1478 aa35.22■■■■□ 3.23
MGAT1-223ENST00000514283 ABCA10Q8WWZ4 1543 aa35.2■■■■□ 3.23
MGAT1-223ENST00000514283 PBRM1Q86U86 1689 aa35.2■■■■□ 3.23
MGAT1-223ENST00000514283 SYNJ1O43426 1573 aa35.17■■■■□ 3.22
MGAT1-223ENST00000514283 SYNJ2O15056 1496 aa35.16■■■■□ 3.22
MGAT1-223ENST00000514283 CYB5RLQ6IPT4 315 aa35.15■■■■□ 3.22
MGAT1-223ENST00000514283 WRNQ14191 1432 aaPredicted RBP eCLIP35.15■■■■□ 3.22
MGAT1-223ENST00000514283 ABCA5Q8WWZ7 1642 aa35.13■■■■□ 3.21
MGAT1-223ENST00000514283 TOP2BQ02880 1626 aa35.1■■■■□ 3.21
MGAT1-223ENST00000514283 BIVM-ERCC5R4GMW8 1640 aa35.1■■■■□ 3.21
MGAT1-223ENST00000514283 CLASP1Q7Z460 1538 aa35.08■■■■□ 3.21
MGAT1-223ENST00000514283 ARAP1Q96P48 1450 aa35.03■■■■□ 3.2
MGAT1-223ENST00000514283 GRIN2AQ12879 1464 aa34.84■■■■□ 3.17
MGAT1-223ENST00000514283 ADAMTS12P58397 1594 aa34.84■■■■□ 3.17
MGAT1-223ENST00000514283 ERICH3Q5RHP9 1530 aa34.79■■■■□ 3.16
MGAT1-223ENST00000514283 FHAD1B1AJZ9 1412 aa34.79■■■■□ 3.16
MGAT1-223ENST00000514283 TRHP20396 242 aaPredicted RBP34.74■■■■□ 3.15
MGAT1-223ENST00000514283 NUP160Q12769 1436 aa34.69■■■■□ 3.14
MGAT1-223ENST00000514283 CEP170Q5SW79 1584 aa34.68■■■■□ 3.14
MGAT1-223ENST00000514283 SHROOM2Q13796 1616 aa34.52■■■■□ 3.12
MGAT1-223ENST00000514283 ERCC6L2Q5T890 1561 aa34.51■■■■□ 3.12
MGAT1-223ENST00000514283 KIF27Q86VH2 1401 aa34.46■■■■□ 3.11
MGAT1-223ENST00000514283 JPH4Q96JJ6 628 aa34.37■■■■□ 3.09
MGAT1-223ENST00000514283 PRG4Q92954 1404 aaPredicted RBP34.37■■■■□ 3.09
MGAT1-223ENST00000514283 CUL7Q14999 1698 aa34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms