RNA–Protein interactions for RNA: ENST00000514233.1

SDHA-217, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-217ENST00000514233 NISCHQ9Y2I1 1504 aa22.77■■□□□ 1.24
SDHA-217ENST00000514233 ABCC9O60706 1549 aa20.52■□□□□ 0.87
SDHA-217ENST00000514233 CCDC180Q9P1Z9 1646 aa20.49■□□□□ 0.87
SDHA-217ENST00000514233 RB1CC1Q8TDY2 1594 aa19.54■□□□□ 0.72
SDHA-217ENST00000514233 NACADO15069 1562 aa19.4■□□□□ 0.7
SDHA-217ENST00000514233 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
SDHA-217ENST00000514233 MYO15BQ96JP2 1530 aa19.17■□□□□ 0.66
SDHA-217ENST00000514233 DCAF8L2P0C7V8 631 aa19.15■□□□□ 0.66
SDHA-217ENST00000514233 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
SDHA-217ENST00000514233 UNC13AQ9UPW8 1703 aa19.04■□□□□ 0.64
SDHA-217ENST00000514233 BICRAQ9NZM4 1560 aa18.97■□□□□ 0.63
SDHA-217ENST00000514233 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
SDHA-217ENST00000514233 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
SDHA-217ENST00000514233 SHROOM4Q9ULL8 1493 aa18.8■□□□□ 0.6
SDHA-217ENST00000514233 SCRIBQ14160 1630 aa18.59■□□□□ 0.57
SDHA-217ENST00000514233 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
SDHA-217ENST00000514233 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
SDHA-217ENST00000514233 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
SDHA-217ENST00000514233 NCAPD3P42695 1498 aa17.93■□□□□ 0.46
SDHA-217ENST00000514233 DNAJC5Q9H3Z4 198 aa17.9■□□□□ 0.46
SDHA-217ENST00000514233 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.45
SDHA-217ENST00000514233 CUX2O14529 1486 aa17.81■□□□□ 0.44
SDHA-217ENST00000514233 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
SDHA-217ENST00000514233 HMGXB3Q12766 1538 aa17.77■□□□□ 0.44
SDHA-217ENST00000514233 SMARCA4P51532 1647 aa17.76■□□□□ 0.43
SDHA-217ENST00000514233 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
SDHA-217ENST00000514233 BAZ1AQ9NRL2 1556 aaPredicted RBP17.68■□□□□ 0.42
SDHA-217ENST00000514233 PEG3Q9GZU2 1588 aa17.66■□□□□ 0.42
SDHA-217ENST00000514233 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
SDHA-217ENST00000514233 NESP48681 1621 aa17.6■□□□□ 0.41
SDHA-217ENST00000514233 LAMC3Q9Y6N6 1575 aa17.52■□□□□ 0.39
SDHA-217ENST00000514233 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
SDHA-217ENST00000514233 THOC2Q8NI27 1593 aaKnown RBP17.48■□□□□ 0.39
SDHA-217ENST00000514233 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
SDHA-217ENST00000514233 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
SDHA-217ENST00000514233 CADPSQ9ULU8 1353 aa17.36■□□□□ 0.37
SDHA-217ENST00000514233 WIZO95785 1651 aa17.26■□□□□ 0.35
SDHA-217ENST00000514233 MRC2Q9UBG0 1479 aa17.26■□□□□ 0.35
SDHA-217ENST00000514233 WDR62O43379 1518 aa17.24■□□□□ 0.35
SDHA-217ENST00000514233 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
SDHA-217ENST00000514233 CFTRP13569 1480 aa17.15■□□□□ 0.34
SDHA-217ENST00000514233 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.33
SDHA-217ENST00000514233 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
SDHA-217ENST00000514233 TOP2AP11388 1531 aaKnown RBP17.09■□□□□ 0.33
SDHA-217ENST00000514233 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
SDHA-217ENST00000514233 TRIM41Q8WV44 630 aa16.97■□□□□ 0.31
SDHA-217ENST00000514233 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
SDHA-217ENST00000514233 PRDM2Q13029 1718 aa16.91■□□□□ 0.3
SDHA-217ENST00000514233 CCDC88BA6NC98 1476 aa16.89■□□□□ 0.29
SDHA-217ENST00000514233 IFT140Q96RY7 1462 aa16.85■□□□□ 0.29
SDHA-217ENST00000514233 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
SDHA-217ENST00000514233 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
SDHA-217ENST00000514233 ZNF608Q9ULD9 1512 aaPredicted RBP16.8■□□□□ 0.28
SDHA-217ENST00000514233 DNMBPQ6XZF7 1577 aa16.74■□□□□ 0.27
SDHA-217ENST00000514233 RIMBP3CA6NJZ7 1639 aa16.7■□□□□ 0.26
SDHA-217ENST00000514233 RIMBP3BA6NNM3 1639 aa16.7■□□□□ 0.26
SDHA-217ENST00000514233 RIMBP3Q9UFD9 1639 aa16.7■□□□□ 0.26
SDHA-217ENST00000514233 EIF4G3O43432 1585 aaKnown RBP16.7■□□□□ 0.26
SDHA-217ENST00000514233 ARHGEF11O15085 1522 aa16.67■□□□□ 0.26
SDHA-217ENST00000514233 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
SDHA-217ENST00000514233 POLA1P09884 1462 aaPredicted RBP16.63■□□□□ 0.25
SDHA-217ENST00000514233 AQRO60306 1485 aaKnown RBP eCLIP16.62■□□□□ 0.257e-7■■□□□ 13.8
SDHA-217ENST00000514233 CHD1O14646 1710 aa16.56■□□□□ 0.24
SDHA-217ENST00000514233 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
SDHA-217ENST00000514233 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
SDHA-217ENST00000514233 SOGA1O94964 1423 aa16.53■□□□□ 0.24
SDHA-217ENST00000514233 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.24
SDHA-217ENST00000514233 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
SDHA-217ENST00000514233 FBLN2P98095 1184 aa16.5■□□□□ 0.23
SDHA-217ENST00000514233 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
SDHA-217ENST00000514233 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
SDHA-217ENST00000514233 CUX1P39880 1505 aa16.47■□□□□ 0.23
SDHA-217ENST00000514233 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
SDHA-217ENST00000514233 MAGI1Q96QZ7 1491 aaPredicted RBP16.46■□□□□ 0.23
SDHA-217ENST00000514233 GRIN2BQ13224 1484 aa16.43■□□□□ 0.22
SDHA-217ENST00000514233 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
SDHA-217ENST00000514233 SYNJ1O43426 1573 aa16.4■□□□□ 0.22
SDHA-217ENST00000514233 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
SDHA-217ENST00000514233 SYNJ2O15056 1496 aa16.39■□□□□ 0.21
SDHA-217ENST00000514233 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
SDHA-217ENST00000514233 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
SDHA-217ENST00000514233 ABCA10Q8WWZ4 1543 aa16.34■□□□□ 0.21
SDHA-217ENST00000514233 PBRM1Q86U86 1689 aa16.3■□□□□ 0.2
SDHA-217ENST00000514233 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
SDHA-217ENST00000514233 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.19
SDHA-217ENST00000514233 SUPT5HO00267 1087 aaKnown RBP16.23■□□□□ 0.19
SDHA-217ENST00000514233 GRIN2AQ12879 1464 aa16.21■□□□□ 0.19
SDHA-217ENST00000514233 TOP2BQ02880 1626 aa16.19■□□□□ 0.18
SDHA-217ENST00000514233 NUP160Q12769 1436 aa16.19■□□□□ 0.18
SDHA-217ENST00000514233 BIVM-ERCC5R4GMW8 1640 aa16.18■□□□□ 0.18
SDHA-217ENST00000514233 ADAMTS12P58397 1594 aa16.17■□□□□ 0.18
SDHA-217ENST00000514233 FHAD1B1AJZ9 1412 aa16.15■□□□□ 0.18
SDHA-217ENST00000514233 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.17
SDHA-217ENST00000514233 CEP170Q5SW79 1584 aa16.13■□□□□ 0.17
SDHA-217ENST00000514233 ERCC6L2Q5T890 1561 aa16.11■□□□□ 0.17
SDHA-217ENST00000514233 SHROOM2Q13796 1616 aa16.11■□□□□ 0.17
SDHA-217ENST00000514233 PRG4Q92954 1404 aaPredicted RBP16■□□□□ 0.15
SDHA-217ENST00000514233 JPH4Q96JJ6 628 aa15.99■□□□□ 0.15
SDHA-217ENST00000514233 RUSC2Q8N2Y8 1516 aa15.95■□□□□ 0.14
SDHA-217ENST00000514233 AEBP2Q6ZN18 517 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms