RNA–Protein interactions for RNA: ENST00000514095.5

PAPD4-215, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-215ENST00000514095 NISCHQ9Y2I1 1504 aa36.31■■■■□ 3.4
PAPD4-215ENST00000514095 CCDC180Q9P1Z9 1646 aa32.45■■■□□ 2.79
PAPD4-215ENST00000514095 ABCC9O60706 1549 aa32.21■■■□□ 2.75
PAPD4-215ENST00000514095 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
PAPD4-215ENST00000514095 DCAF8L2P0C7V8 631 aa30.64■■■□□ 2.5
PAPD4-215ENST00000514095 NACADO15069 1562 aa30.63■■■□□ 2.49
PAPD4-215ENST00000514095 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
PAPD4-215ENST00000514095 ZCCHC6Q5VYS8 1495 aaKnown RBP30.14■■■□□ 2.42
PAPD4-215ENST00000514095 PABPN1Q86U42 306 aaKnown RBP eCLIP30.05■■■□□ 2.4
PAPD4-215ENST00000514095 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
PAPD4-215ENST00000514095 DCAF1Q9Y4B6 1507 aa30■■■□□ 2.39
PAPD4-215ENST00000514095 DNAJC5BQ9UF47 199 aa29.92■■■□□ 2.38
PAPD4-215ENST00000514095 BICRAQ9NZM4 1560 aa29.82■■■□□ 2.36
PAPD4-215ENST00000514095 SCRIBQ14160 1630 aa29.61■■■□□ 2.33
PAPD4-215ENST00000514095 SHROOM4Q9ULL8 1493 aa29.48■■■□□ 2.31
PAPD4-215ENST00000514095 EIF4G1Q04637 1599 aaKnown RBP29.09■■■□□ 2.25
PAPD4-215ENST00000514095 CC2D2AQ9P2K1 1620 aa29.09■■■□□ 2.25
PAPD4-215ENST00000514095 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
PAPD4-215ENST00000514095 NCAPD3P42695 1498 aa28.27■■■□□ 2.12
PAPD4-215ENST00000514095 SMARCA4P51532 1647 aa28.26■■■□□ 2.11
PAPD4-215ENST00000514095 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
PAPD4-215ENST00000514095 SMARCA2P51531 1590 aa28.18■■■□□ 2.1
PAPD4-215ENST00000514095 BAZ1AQ9NRL2 1556 aaPredicted RBP28.18■■■□□ 2.1
PAPD4-215ENST00000514095 HMGXB3Q12766 1538 aa28.08■■■□□ 2.09
PAPD4-215ENST00000514095 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
PAPD4-215ENST00000514095 MROH2BQ7Z745 1585 aa27.97■■■□□ 2.07
PAPD4-215ENST00000514095 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
PAPD4-215ENST00000514095 ERCC6Q03468 1493 aa27.83■■■□□ 2.05
PAPD4-215ENST00000514095 NESP48681 1621 aa27.73■■■□□ 2.03
PAPD4-215ENST00000514095 WIZO95785 1651 aa27.66■■■□□ 2.02
PAPD4-215ENST00000514095 CUX2O14529 1486 aa27.64■■■□□ 2.02
PAPD4-215ENST00000514095 LAMC3Q9Y6N6 1575 aa27.6■■■□□ 2.01
PAPD4-215ENST00000514095 RSF1Q96T23 1441 aaPredicted RBP27.5■■□□□ 1.99
PAPD4-215ENST00000514095 PDS5BQ9NTI5 1447 aa27.46■■□□□ 1.99
PAPD4-215ENST00000514095 CADPSQ9ULU8 1353 aa27.44■■□□□ 1.98
PAPD4-215ENST00000514095 KIF21AQ7Z4S6 1674 aa27.39■■□□□ 1.97
PAPD4-215ENST00000514095 THOC2Q8NI27 1593 aaKnown RBP27.37■■□□□ 1.97
PAPD4-215ENST00000514095 TOP2AP11388 1531 aaKnown RBP27.34■■□□□ 1.97
PAPD4-215ENST00000514095 DNAJC5Q9H3Z4 198 aa27.31■■□□□ 1.96
PAPD4-215ENST00000514095 MRC2Q9UBG0 1479 aa27.18■■□□□ 1.94
PAPD4-215ENST00000514095 CFTRP13569 1480 aa27.17■■□□□ 1.94
PAPD4-215ENST00000514095 CEP164Q9UPV0 1460 aa27.14■■□□□ 1.94
PAPD4-215ENST00000514095 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
PAPD4-215ENST00000514095 WDR62O43379 1518 aa27.08■■□□□ 1.93
PAPD4-215ENST00000514095 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
PAPD4-215ENST00000514095 PRDM2Q13029 1718 aa26.93■■□□□ 1.9
PAPD4-215ENST00000514095 URB2Q14146 1524 aaKnown RBP26.86■■□□□ 1.89
PAPD4-215ENST00000514095 TOPBP1Q92547 1522 aa26.64■■□□□ 1.85
PAPD4-215ENST00000514095 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
PAPD4-215ENST00000514095 SUPT5HO00267 1087 aaKnown RBP26.59■■□□□ 1.85
PAPD4-215ENST00000514095 IFT140Q96RY7 1462 aa26.59■■□□□ 1.85
PAPD4-215ENST00000514095 DNMBPQ6XZF7 1577 aa26.57■■□□□ 1.84
PAPD4-215ENST00000514095 ZNF608Q9ULD9 1512 aaPredicted RBP26.49■■□□□ 1.83
PAPD4-215ENST00000514095 OSCARQ8IYS5 282 aa26.47■■□□□ 1.83
PAPD4-215ENST00000514095 POLA1P09884 1462 aaPredicted RBP26.38■■□□□ 1.81
PAPD4-215ENST00000514095 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
PAPD4-215ENST00000514095 TARBP1Q13395 1621 aaKnown RBP26.36■■□□□ 1.81
PAPD4-215ENST00000514095 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.8
PAPD4-215ENST00000514095 SOGA1O94964 1423 aa26.3■■□□□ 1.8
PAPD4-215ENST00000514095 RAD54L2Q9Y4B4 1467 aa26.29■■□□□ 1.8
PAPD4-215ENST00000514095 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
PAPD4-215ENST00000514095 CUX1P39880 1505 aa26.27■■□□□ 1.8
PAPD4-215ENST00000514095 FGD5Q6ZNL6 1462 aa26.26■■□□□ 1.79
PAPD4-215ENST00000514095 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.79
PAPD4-215ENST00000514095 FBLN2P98095 1184 aa26.15■■□□□ 1.78
PAPD4-215ENST00000514095 WDR97A6NE52 1622 aa26.14■■□□□ 1.77
PAPD4-215ENST00000514095 CHD1O14646 1710 aa26.11■■□□□ 1.77
PAPD4-215ENST00000514095 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
PAPD4-215ENST00000514095 RIMBP3CA6NJZ7 1639 aa26.04■■□□□ 1.76
PAPD4-215ENST00000514095 RIMBP3BA6NNM3 1639 aa26.04■■□□□ 1.76
PAPD4-215ENST00000514095 RIMBP3Q9UFD9 1639 aa26.04■■□□□ 1.76
PAPD4-215ENST00000514095 GRIN2BQ13224 1484 aa26.03■■□□□ 1.76
PAPD4-215ENST00000514095 ARHGEF11O15085 1522 aa25.99■■□□□ 1.75
PAPD4-215ENST00000514095 MAGI1Q96QZ7 1491 aaPredicted RBP25.99■■□□□ 1.75
PAPD4-215ENST00000514095 CHMP7Q8WUX9 453 aaPredicted RBP25.99■■□□□ 1.75
PAPD4-215ENST00000514095 ABCA10Q8WWZ4 1543 aa25.98■■□□□ 1.75
PAPD4-215ENST00000514095 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
PAPD4-215ENST00000514095 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
PAPD4-215ENST00000514095 TOP2BQ02880 1626 aa25.94■■□□□ 1.74
PAPD4-215ENST00000514095 PBRM1Q86U86 1689 aa25.93■■□□□ 1.74
PAPD4-215ENST00000514095 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
PAPD4-215ENST00000514095 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
PAPD4-215ENST00000514095 SYNJ1O43426 1573 aa25.9■■□□□ 1.74
PAPD4-215ENST00000514095 ABCA5Q8WWZ7 1642 aa25.89■■□□□ 1.74
PAPD4-215ENST00000514095 CYB5RLQ6IPT4 315 aa25.84■■□□□ 1.73
PAPD4-215ENST00000514095 CLASP1Q7Z460 1538 aa25.8■■□□□ 1.72
PAPD4-215ENST00000514095 ARAP1Q96P48 1450 aa25.75■■□□□ 1.71
PAPD4-215ENST00000514095 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
PAPD4-215ENST00000514095 GRIN2AQ12879 1464 aa25.67■■□□□ 1.7
PAPD4-215ENST00000514095 ERICH3Q5RHP9 1530 aa25.67■■□□□ 1.7
PAPD4-215ENST00000514095 FHAD1B1AJZ9 1412 aa25.65■■□□□ 1.7
PAPD4-215ENST00000514095 NUP160Q12769 1436 aa25.56■■□□□ 1.68
PAPD4-215ENST00000514095 CEP170Q5SW79 1584 aa25.56■■□□□ 1.68
PAPD4-215ENST00000514095 TRHP20396 242 aaPredicted RBP25.49■■□□□ 1.67
PAPD4-215ENST00000514095 KIF27Q86VH2 1401 aa25.47■■□□□ 1.67
PAPD4-215ENST00000514095 ERCC6L2Q5T890 1561 aa25.42■■□□□ 1.66
PAPD4-215ENST00000514095 IGF1RP08069 1367 aa25.41■■□□□ 1.66
PAPD4-215ENST00000514095 SHROOM2Q13796 1616 aa25.41■■□□□ 1.66
PAPD4-215ENST00000514095 CUL7Q14999 1698 aa25.36■■□□□ 1.65
PAPD4-215ENST00000514095 JPH4Q96JJ6 628 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms