RNA–Protein interactions for RNA: ENST00000513956.5

CCND3-219, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-219ENST00000513956 NISCHQ9Y2I1 1504 aa45.03■■■■■ 4.8
CCND3-219ENST00000513956 CCDC180Q9P1Z9 1646 aa40.2■■■■■ 4.03
CCND3-219ENST00000513956 ABCC9O60706 1549 aa40.08■■■■■ 4.01
CCND3-219ENST00000513956 RB1CC1Q8TDY2 1594 aa38.15■■■■□ 3.7
CCND3-219ENST00000513956 DCAF8L2P0C7V8 631 aa38.13■■■■□ 3.69
CCND3-219ENST00000513956 NACADO15069 1562 aa37.93■■■■□ 3.66
CCND3-219ENST00000513956 PABPN1Q86U42 306 aaKnown RBP eCLIP37.43■■■■□ 3.58
CCND3-219ENST00000513956 UNC13AQ9UPW8 1703 aa37.41■■■■□ 3.58
CCND3-219ENST00000513956 MYO15BQ96JP2 1530 aa37.39■■■■□ 3.58
CCND3-219ENST00000513956 ZCCHC6Q5VYS8 1495 aaKnown RBP37.37■■■■□ 3.57
CCND3-219ENST00000513956 DNAJC5BQ9UF47 199 aa37.31■■■■□ 3.56
CCND3-219ENST00000513956 DCAF1Q9Y4B6 1507 aa37.08■■■■□ 3.53
CCND3-219ENST00000513956 BICRAQ9NZM4 1560 aa37.07■■■■□ 3.52
CCND3-219ENST00000513956 SCRIBQ14160 1630 aa36.85■■■■□ 3.49
CCND3-219ENST00000513956 SHROOM4Q9ULL8 1493 aa36.38■■■■□ 3.41
CCND3-219ENST00000513956 CC2D2AQ9P2K1 1620 aa36.16■■■■□ 3.38
CCND3-219ENST00000513956 EIF4G1Q04637 1599 aaKnown RBP36.13■■■■□ 3.37
CCND3-219ENST00000513956 CECR2Q9BXF3 1484 aa35.99■■■■□ 3.35
CCND3-219ENST00000513956 SMARCA4P51532 1647 aa35.09■■■■□ 3.21
CCND3-219ENST00000513956 ATAD2BQ9ULI0 1458 aa35.01■■■■□ 3.19
CCND3-219ENST00000513956 NCAPD3P42695 1498 aa35■■■■□ 3.19
CCND3-219ENST00000513956 BAZ1AQ9NRL2 1556 aaPredicted RBP34.91■■■■□ 3.18
CCND3-219ENST00000513956 SMARCA2P51531 1590 aa34.89■■■■□ 3.18
CCND3-219ENST00000513956 MROH2BQ7Z745 1585 aa34.78■■■■□ 3.16
CCND3-219ENST00000513956 HMGXB3Q12766 1538 aa34.77■■■■□ 3.16
CCND3-219ENST00000513956 BAZ1BQ9UIG0 1483 aaKnown RBP34.72■■■■□ 3.15
CCND3-219ENST00000513956 PEG3Q9GZU2 1588 aa34.62■■■■□ 3.13
CCND3-219ENST00000513956 ERCC6Q03468 1493 aa34.54■■■■□ 3.12
CCND3-219ENST00000513956 NESP48681 1621 aa34.53■■■■□ 3.12
CCND3-219ENST00000513956 WIZO95785 1651 aa34.43■■■■□ 3.1
CCND3-219ENST00000513956 CUX2O14529 1486 aa34.22■■■■□ 3.07
CCND3-219ENST00000513956 LAMC3Q9Y6N6 1575 aa34.19■■■■□ 3.06
CCND3-219ENST00000513956 RSF1Q96T23 1441 aaPredicted RBP34.13■■■■□ 3.05
CCND3-219ENST00000513956 KIF21AQ7Z4S6 1674 aa34.09■■■■□ 3.05
CCND3-219ENST00000513956 THOC2Q8NI27 1593 aaKnown RBP34.02■■■■□ 3.04
CCND3-219ENST00000513956 CADPSQ9ULU8 1353 aa34■■■■□ 3.03
CCND3-219ENST00000513956 PDS5BQ9NTI5 1447 aa33.98■■■■□ 3.03
CCND3-219ENST00000513956 TOP2AP11388 1531 aaKnown RBP33.9■■■■□ 3.02
CCND3-219ENST00000513956 DNAJC5Q9H3Z4 198 aa33.9■■■■□ 3.02
CCND3-219ENST00000513956 MRC2Q9UBG0 1479 aa33.7■■■□□ 2.99
CCND3-219ENST00000513956 CFTRP13569 1480 aa33.67■■■□□ 2.98
CCND3-219ENST00000513956 FANCD2Q9BXW9 1451 aa33.66■■■□□ 2.98
CCND3-219ENST00000513956 CEP164Q9UPV0 1460 aa33.65■■■□□ 2.98
CCND3-219ENST00000513956 WDR62O43379 1518 aa33.59■■■□□ 2.97
CCND3-219ENST00000513956 CCDC88BA6NC98 1476 aa33.56■■■□□ 2.96
CCND3-219ENST00000513956 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
CCND3-219ENST00000513956 URB2Q14146 1524 aaKnown RBP33.38■■■□□ 2.93
CCND3-219ENST00000513956 SUPT5HO00267 1087 aaKnown RBP33.08■■■□□ 2.89
CCND3-219ENST00000513956 TOPBP1Q92547 1522 aa33.06■■■□□ 2.88
CCND3-219ENST00000513956 ZNF608Q9ULD9 1512 aaPredicted RBP32.96■■■□□ 2.87
CCND3-219ENST00000513956 DNMBPQ6XZF7 1577 aa32.95■■■□□ 2.86
CCND3-219ENST00000513956 IFT140Q96RY7 1462 aa32.93■■■□□ 2.86
CCND3-219ENST00000513956 ABCC8Q09428 1581 aa32.9■■■□□ 2.86
CCND3-219ENST00000513956 OSCARQ8IYS5 282 aa32.81■■■□□ 2.84
CCND3-219ENST00000513956 EIF4G3O43432 1585 aaKnown RBP32.76■■■□□ 2.84
CCND3-219ENST00000513956 TRIM41Q8WV44 630 aa32.76■■■□□ 2.83
CCND3-219ENST00000513956 POLA1P09884 1462 aaPredicted RBP32.74■■■□□ 2.83
CCND3-219ENST00000513956 TARBP1Q13395 1621 aaKnown RBP32.73■■■□□ 2.83
CCND3-219ENST00000513956 AQRO60306 1485 aaKnown RBP eCLIP32.71■■■□□ 2.835e-7■■■■■ 40.3
CCND3-219ENST00000513956 RAD54L2Q9Y4B4 1467 aa32.7■■■□□ 2.83
CCND3-219ENST00000513956 CUX1P39880 1505 aa32.65■■■□□ 2.82
CCND3-219ENST00000513956 FGD5Q6ZNL6 1462 aa32.61■■■□□ 2.81
CCND3-219ENST00000513956 SOGA1O94964 1423 aa32.61■■■□□ 2.81
CCND3-219ENST00000513956 TDRD9Q8NDG6 1382 aaKnown RBP32.57■■■□□ 2.8
CCND3-219ENST00000513956 FBLN2P98095 1184 aa32.52■■■□□ 2.8
CCND3-219ENST00000513956 CHD1O14646 1710 aa32.51■■■□□ 2.79
CCND3-219ENST00000513956 RIMBP3CA6NJZ7 1639 aa32.39■■■□□ 2.78
CCND3-219ENST00000513956 RIMBP3BA6NNM3 1639 aa32.39■■■□□ 2.78
CCND3-219ENST00000513956 RIMBP3Q9UFD9 1639 aa32.39■■■□□ 2.78
CCND3-219ENST00000513956 SNAPC4Q5SXM2 1469 aa32.35■■■□□ 2.77
CCND3-219ENST00000513956 WDR97A6NE52 1622 aa32.34■■■□□ 2.77
CCND3-219ENST00000513956 ARHGEF11O15085 1522 aa32.29■■■□□ 2.76
CCND3-219ENST00000513956 GRIN2BQ13224 1484 aa32.25■■■□□ 2.75
CCND3-219ENST00000513956 PBRM1Q86U86 1689 aa32.24■■■□□ 2.75
CCND3-219ENST00000513956 CHMP7Q8WUX9 453 aaPredicted RBP32.23■■■□□ 2.75
CCND3-219ENST00000513956 GAPVD1Q14C86 1478 aa32.22■■■□□ 2.75
CCND3-219ENST00000513956 SYNJ1O43426 1573 aa32.21■■■□□ 2.75
CCND3-219ENST00000513956 WRNQ14191 1432 aaPredicted RBP eCLIP32.19■■■□□ 2.749e-6■■■■■ 50.1
CCND3-219ENST00000513956 ABCA10Q8WWZ4 1543 aa32.19■■■□□ 2.74
CCND3-219ENST00000513956 MAGI1Q96QZ7 1491 aaPredicted RBP32.18■■■□□ 2.74
CCND3-219ENST00000513956 BIVM-ERCC5R4GMW8 1640 aa32.17■■■□□ 2.74
CCND3-219ENST00000513956 TOP2BQ02880 1626 aa32.16■■■□□ 2.74
CCND3-219ENST00000513956 ABCA5Q8WWZ7 1642 aa32.15■■■□□ 2.74
CCND3-219ENST00000513956 CYB5RLQ6IPT4 315 aa32.13■■■□□ 2.73
CCND3-219ENST00000513956 SYNJ2O15056 1496 aa32.1■■■□□ 2.73
CCND3-219ENST00000513956 CLASP1Q7Z460 1538 aa32.03■■■□□ 2.72
CCND3-219ENST00000513956 ARAP1Q96P48 1450 aa31.99■■■□□ 2.71
CCND3-219ENST00000513956 ADAMTS12P58397 1594 aa31.89■■■□□ 2.7
CCND3-219ENST00000513956 GRIN2AQ12879 1464 aa31.85■■■□□ 2.69
CCND3-219ENST00000513956 FHAD1B1AJZ9 1412 aa31.78■■■□□ 2.68
CCND3-219ENST00000513956 ERICH3Q5RHP9 1530 aa31.78■■■□□ 2.68
CCND3-219ENST00000513956 CEP170Q5SW79 1584 aa31.77■■■□□ 2.68
CCND3-219ENST00000513956 ERCC6L2Q5T890 1561 aa31.69■■■□□ 2.66
CCND3-219ENST00000513956 TRHP20396 242 aaPredicted RBP31.69■■■□□ 2.66
CCND3-219ENST00000513956 NUP160Q12769 1436 aa31.68■■■□□ 2.66
CCND3-219ENST00000513956 KIF27Q86VH2 1401 aa31.55■■■□□ 2.64
CCND3-219ENST00000513956 SHROOM2Q13796 1616 aa31.53■■■□□ 2.64
CCND3-219ENST00000513956 IGF1RP08069 1367 aa31.51■■■□□ 2.63
CCND3-219ENST00000513956 PRG4Q92954 1404 aaPredicted RBP31.45■■■□□ 2.63
CCND3-219ENST00000513956 JPH4Q96JJ6 628 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms