RNA–Protein interactions for RNA: ENST00000513939.5

GCLC-208, Transcript of glutamate-cysteine ligase catalytic subunit, humanhuman

TSL 2

Gene GCLC, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLC-208ENST00000513939 AEBP2Q6ZN18 517 aaPredicted RBP25.43■■□□□ 1.66
GCLC-208ENST00000513939 CHIC1Q5VXU3 224 aa24.05■■□□□ 1.44
GCLC-208ENST00000513939 NISCHQ9Y2I1 1504 aa22.88■■□□□ 1.25
GCLC-208ENST00000513939 SENP3Q9H4L4 574 aaPredicted RBP21.94■■□□□ 1.1
GCLC-208ENST00000513939 PHF23Q9BUL5 403 aaPredicted RBP21.53■■□□□ 1.04
GCLC-208ENST00000513939 CCDC180Q9P1Z9 1646 aa20.47■□□□□ 0.87
GCLC-208ENST00000513939 FOXD1Q16676 465 aa20.34■□□□□ 0.85
GCLC-208ENST00000513939 ABCC9O60706 1549 aa20.24■□□□□ 0.83
GCLC-208ENST00000513939 RB1CC1Q8TDY2 1594 aa19.39■□□□□ 0.69
GCLC-208ENST00000513939 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
GCLC-208ENST00000513939 MSH5O43196 834 aa19.3■□□□□ 0.68
GCLC-208ENST00000513939 NACADO15069 1562 aa19.28■□□□□ 0.68
GCLC-208ENST00000513939 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
GCLC-208ENST00000513939 POTEDQ86YR6 584 aa19.08■□□□□ 0.64
GCLC-208ENST00000513939 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
GCLC-208ENST00000513939 PIAS4Q8N2W9 510 aaPredicted RBP19.03■□□□□ 0.64
GCLC-208ENST00000513939 ZCCHC6Q5VYS8 1495 aaKnown RBP19.01■□□□□ 0.63
GCLC-208ENST00000513939 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
GCLC-208ENST00000513939 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
GCLC-208ENST00000513939 PABPN1Q86U42 306 aaKnown RBP eCLIP18.87■□□□□ 0.61
GCLC-208ENST00000513939 PPP6R1Q9UPN7 881 aa18.76■□□□□ 0.59
GCLC-208ENST00000513939 BICRAQ9NZM4 1560 aa18.74■□□□□ 0.59
GCLC-208ENST00000513939 ADRA2BP18089 450 aa18.74■□□□□ 0.59
GCLC-208ENST00000513939 DNAJC5BQ9UF47 199 aa18.7■□□□□ 0.58
GCLC-208ENST00000513939 SCRIBQ14160 1630 aa18.69■□□□□ 0.58
GCLC-208ENST00000513939 SHROOM4Q9ULL8 1493 aa18.55■□□□□ 0.56
GCLC-208ENST00000513939 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
GCLC-208ENST00000513939 CC2D2AQ9P2K1 1620 aa18.3■□□□□ 0.52
GCLC-208ENST00000513939 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
GCLC-208ENST00000513939 SMARCA4P51532 1647 aa17.82■□□□□ 0.44
GCLC-208ENST00000513939 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
GCLC-208ENST00000513939 BAZ1AQ9NRL2 1556 aaPredicted RBP17.77■□□□□ 0.44
GCLC-208ENST00000513939 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
GCLC-208ENST00000513939 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
GCLC-208ENST00000513939 HMGXB3Q12766 1538 aa17.68■□□□□ 0.42
GCLC-208ENST00000513939 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.41
GCLC-208ENST00000513939 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
GCLC-208ENST00000513939 PEG3Q9GZU2 1588 aa17.61■□□□□ 0.41
GCLC-208ENST00000513939 ERCC6Q03468 1493 aa17.51■□□□□ 0.39
GCLC-208ENST00000513939 WIZO95785 1651 aa17.46■□□□□ 0.39
GCLC-208ENST00000513939 NESP48681 1621 aa17.43■□□□□ 0.38
GCLC-208ENST00000513939 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
GCLC-208ENST00000513939 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
GCLC-208ENST00000513939 CUX2O14529 1486 aa17.35■□□□□ 0.37
GCLC-208ENST00000513939 RSF1Q96T23 1441 aaPredicted RBP17.34■□□□□ 0.37
GCLC-208ENST00000513939 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
GCLC-208ENST00000513939 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
GCLC-208ENST00000513939 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
GCLC-208ENST00000513939 CADPSQ9ULU8 1353 aa17.26■□□□□ 0.35
GCLC-208ENST00000513939 TOP2AP11388 1531 aaKnown RBP17.26■□□□□ 0.35
GCLC-208ENST00000513939 MAPK8IP2Q13387 824 aaPredicted RBP17.24■□□□□ 0.35
GCLC-208ENST00000513939 THOC2Q8NI27 1593 aaKnown RBP17.22■□□□□ 0.35
GCLC-208ENST00000513939 MRC2Q9UBG0 1479 aa17.11■□□□□ 0.33
GCLC-208ENST00000513939 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
GCLC-208ENST00000513939 CFTRP13569 1480 aa17.09■□□□□ 0.33
GCLC-208ENST00000513939 FANCD2Q9BXW9 1451 aa17.08■□□□□ 0.32
GCLC-208ENST00000513939 DNAJC5Q9H3Z4 198 aa17.04■□□□□ 0.32
GCLC-208ENST00000513939 CCDC88BA6NC98 1476 aa17.04■□□□□ 0.32
GCLC-208ENST00000513939 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
GCLC-208ENST00000513939 WDR62O43379 1518 aa17.03■□□□□ 0.32
GCLC-208ENST00000513939 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
GCLC-208ENST00000513939 SUPT5HO00267 1087 aaKnown RBP16.83■□□□□ 0.28
GCLC-208ENST00000513939 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
GCLC-208ENST00000513939 TOPBP1Q92547 1522 aa16.78■□□□□ 0.28
GCLC-208ENST00000513939 DNMBPQ6XZF7 1577 aa16.76■□□□□ 0.27
GCLC-208ENST00000513939 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
GCLC-208ENST00000513939 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
GCLC-208ENST00000513939 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
GCLC-208ENST00000513939 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
GCLC-208ENST00000513939 DCAF8L1A6NGE4 600 aa16.64■□□□□ 0.25
GCLC-208ENST00000513939 EIF4G3O43432 1585 aaKnown RBP16.61■□□□□ 0.25
GCLC-208ENST00000513939 OSCARQ8IYS5 282 aa16.61■□□□□ 0.25
GCLC-208ENST00000513939 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
GCLC-208ENST00000513939 TARBP1Q13395 1621 aaKnown RBP16.59■□□□□ 0.25
GCLC-208ENST00000513939 HOXD11P31277 338 aaPredicted RBP16.57■□□□□ 0.24
GCLC-208ENST00000513939 CUX1P39880 1505 aa16.56■□□□□ 0.24
GCLC-208ENST00000513939 SOGA1O94964 1423 aa16.56■□□□□ 0.24
GCLC-208ENST00000513939 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
GCLC-208ENST00000513939 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.24
GCLC-208ENST00000513939 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
GCLC-208ENST00000513939 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.24
GCLC-208ENST00000513939 TRIM41Q8WV44 630 aa16.48■□□□□ 0.23
GCLC-208ENST00000513939 TDRD9Q8NDG6 1382 aaKnown RBP16.48■□□□□ 0.23
GCLC-208ENST00000513939 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
GCLC-208ENST00000513939 CHD1O14646 1710 aa16.48■□□□□ 0.23
GCLC-208ENST00000513939 FBLN2P98095 1184 aa16.46■□□□□ 0.23
GCLC-208ENST00000513939 RNF216Q9NWF9 866 aaPredicted RBP16.42■□□□□ 0.22
GCLC-208ENST00000513939 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
GCLC-208ENST00000513939 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.21
GCLC-208ENST00000513939 GRIN2BQ13224 1484 aa16.39■□□□□ 0.21
GCLC-208ENST00000513939 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
GCLC-208ENST00000513939 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
GCLC-208ENST00000513939 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
GCLC-208ENST00000513939 MAGI1Q96QZ7 1491 aaPredicted RBP16.37■□□□□ 0.21
GCLC-208ENST00000513939 ABCA10Q8WWZ4 1543 aa16.37■□□□□ 0.21
GCLC-208ENST00000513939 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
GCLC-208ENST00000513939 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
GCLC-208ENST00000513939 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
GCLC-208ENST00000513939 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
GCLC-208ENST00000513939 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms