RNA–Protein interactions for RNA: ENST00000513837.5

FAM13A-220, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 2 BASIC

Gene FAM13A, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-220ENST00000513837 NISCHQ9Y2I1 1504 aa20.52■□□□□ 0.88
FAM13A-220ENST00000513837 SHROOM4Q9ULL8 1493 aa17.66■□□□□ 0.42
FAM13A-220ENST00000513837 DCAF8L2P0C7V8 631 aa17.59■□□□□ 0.41
FAM13A-220ENST00000513837 CCDC180Q9P1Z9 1646 aa17.54■□□□□ 0.4
FAM13A-220ENST00000513837 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
FAM13A-220ENST00000513837 ZCCHC6Q5VYS8 1495 aaKnown RBP17.23■□□□□ 0.35
FAM13A-220ENST00000513837 ABCC9O60706 1549 aa17.2■□□□□ 0.34
FAM13A-220ENST00000513837 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
FAM13A-220ENST00000513837 CHIC1Q5VXU3 224 aa16.89■□□□□ 0.29
FAM13A-220ENST00000513837 DCAF1Q9Y4B6 1507 aa16.68■□□□□ 0.26
FAM13A-220ENST00000513837 HRCP23327 699 aa16.62■□□□□ 0.25
FAM13A-220ENST00000513837 PCGF6Q9BYE7 350 aa16.58■□□□□ 0.25
FAM13A-220ENST00000513837 SCRIBQ14160 1630 aa16.57■□□□□ 0.24
FAM13A-220ENST00000513837 LOC105371045A0A1W2PR82 267 aa16.5■□□□□ 0.23
FAM13A-220ENST00000513837 NACADO15069 1562 aa16.47■□□□□ 0.23
FAM13A-220ENST00000513837 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
FAM13A-220ENST00000513837 PPARGC1BQ86YN6 1023 aaKnown RBP16.41■□□□□ 0.22
FAM13A-220ENST00000513837 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
FAM13A-220ENST00000513837 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
FAM13A-220ENST00000513837 RSF1Q96T23 1441 aaPredicted RBP16.2■□□□□ 0.18
FAM13A-220ENST00000513837 TRIM26Q12899 539 aaPredicted RBP16.12■□□□□ 0.17
FAM13A-220ENST00000513837 UNC13AQ9UPW8 1703 aa16.1■□□□□ 0.17
FAM13A-220ENST00000513837 TRIM41Q8WV44 630 aa16.07■□□□□ 0.16
FAM13A-220ENST00000513837 FAM9AQ8IZU1 332 aaPredicted RBP16.06■□□□□ 0.16
FAM13A-220ENST00000513837 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
FAM13A-220ENST00000513837 EHMT2Q96KQ7 1210 aa16.02■□□□□ 0.15
FAM13A-220ENST00000513837 MROH2BQ7Z745 1585 aa16.01■□□□□ 0.15
FAM13A-220ENST00000513837 WIZO95785 1651 aa15.84■□□□□ 0.13
FAM13A-220ENST00000513837 BAZ1AQ9NRL2 1556 aaPredicted RBP15.74■□□□□ 0.11
FAM13A-220ENST00000513837 ZEB1P37275 1124 aaPredicted RBP15.73■□□□□ 0.11
FAM13A-220ENST00000513837 SMARCA4P51532 1647 aa15.71■□□□□ 0.11
FAM13A-220ENST00000513837 EIF4G1Q04637 1599 aaKnown RBP15.64■□□□□ 0.09
FAM13A-220ENST00000513837 ATAD2BQ9ULI0 1458 aa15.58■□□□□ 0.08
FAM13A-220ENST00000513837 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
FAM13A-220ENST00000513837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
FAM13A-220ENST00000513837 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
FAM13A-220ENST00000513837 CCDC88BA6NC98 1476 aa15.55■□□□□ 0.08
FAM13A-220ENST00000513837 TTBK1Q5TCY1 1321 aaPredicted RBP15.51■□□□□ 0.07
FAM13A-220ENST00000513837 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
FAM13A-220ENST00000513837 TOP2AP11388 1531 aaKnown RBP15.48■□□□□ 0.07
FAM13A-220ENST00000513837 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.07
FAM13A-220ENST00000513837 SMARCA2P51531 1590 aa15.46■□□□□ 0.06
FAM13A-220ENST00000513837 CCER1Q8TC90 406 aaPredicted RBP15.45■□□□□ 0.06
FAM13A-220ENST00000513837 SOGA1O94964 1423 aa15.44■□□□□ 0.06
FAM13A-220ENST00000513837 RUSC2Q8N2Y8 1516 aa15.4■□□□□ 0.06
FAM13A-220ENST00000513837 CEP162Q5TB80 1403 aa15.39■□□□□ 0.05
FAM13A-220ENST00000513837 PEG3Q9GZU2 1588 aa15.38■□□□□ 0.05
FAM13A-220ENST00000513837 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
FAM13A-220ENST00000513837 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
FAM13A-220ENST00000513837 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
FAM13A-220ENST00000513837 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
FAM13A-220ENST00000513837 UBTFP17480 764 aaKnown RBP15.3■□□□□ 0.04
FAM13A-220ENST00000513837 CSRNP3Q8WYN3 585 aa15.3■□□□□ 0.04
FAM13A-220ENST00000513837 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
FAM13A-220ENST00000513837 DIEXFQ68CQ4 756 aaKnown RBP15.24■□□□□ 0.03
FAM13A-220ENST00000513837 ACIN1Q9UKV3 1341 aaKnown RBP15.2■□□□□ 0.02
FAM13A-220ENST00000513837 EEA1Q15075 1411 aa15.19■□□□□ 0.02
FAM13A-220ENST00000513837 GOLGA3Q08378 1498 aa15.18■□□□□ 0.02
FAM13A-220ENST00000513837 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
FAM13A-220ENST00000513837 SYNJ1O43426 1573 aa15.17■□□□□ 0.02
FAM13A-220ENST00000513837 NESP48681 1621 aa15.13■□□□□ 0.01
FAM13A-220ENST00000513837 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
FAM13A-220ENST00000513837 PELP1Q8IZL8 1130 aaKnown RBP15.09■□□□□ 0.01
FAM13A-220ENST00000513837 RANGAP1P46060 587 aaPredicted RBP15.08■□□□□ 0
FAM13A-220ENST00000513837 GTF3C3Q9Y5Q9 886 aa15.08■□□□□ 0
FAM13A-220ENST00000513837 CADPSQ9ULU8 1353 aa15.07■□□□□ 0
FAM13A-220ENST00000513837 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
FAM13A-220ENST00000513837 ZNF316A6NFI3 1004 aaPredicted RBP15.05■□□□□ 0
FAM13A-220ENST00000513837 KIF21BO75037 1637 aa15.05■□□□□ -0
FAM13A-220ENST00000513837 CLIP1P30622 1438 aa15.05■□□□□ -0
FAM13A-220ENST00000513837 CFTRP13569 1480 aa15.05■□□□□ -0
FAM13A-220ENST00000513837 RAPGEF2Q9Y4G8 1499 aa15.03■□□□□ -0
FAM13A-220ENST00000513837 CENPBP07199 599 aaPredicted RBP15□□□□□ -0.01
FAM13A-220ENST00000513837 VPS8Q8N3P4 1428 aa14.98□□□□□ -0.01
FAM13A-220ENST00000513837 YTHDC1Q96MU7 727 aaKnown RBP14.98□□□□□ -0.01
FAM13A-220ENST00000513837 MIER1Q8N108 512 aa14.95□□□□□ -0.02
FAM13A-220ENST00000513837 APLP2Q06481 763 aa14.91□□□□□ -0.02
FAM13A-220ENST00000513837 CUX1P39880 1505 aa14.91□□□□□ -0.02
FAM13A-220ENST00000513837 TOP2BQ02880 1626 aa14.9□□□□□ -0.02
FAM13A-220ENST00000513837 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
FAM13A-220ENST00000513837 KANK4Q5T7N3 995 aaPredicted RBP14.83□□□□□ -0.03
FAM13A-220ENST00000513837 BIVM-ERCC5R4GMW8 1640 aa14.83□□□□□ -0.04
FAM13A-220ENST00000513837 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
FAM13A-220ENST00000513837 PRXQ9BXM0 1461 aa14.8□□□□□ -0.04
FAM13A-220ENST00000513837 RAD54L2Q9Y4B4 1467 aa14.79□□□□□ -0.04
FAM13A-220ENST00000513837 DHX57Q6P158 1386 aaKnown RBP14.77□□□□□ -0.05
FAM13A-220ENST00000513837 ERICH3Q5RHP9 1530 aa14.75□□□□□ -0.05
FAM13A-220ENST00000513837 FGD5Q6ZNL6 1462 aa14.75□□□□□ -0.05
FAM13A-220ENST00000513837 URB2Q14146 1524 aaKnown RBP14.74□□□□□ -0.05
FAM13A-220ENST00000513837 PDS5BQ9NTI5 1447 aa14.74□□□□□ -0.05
FAM13A-220ENST00000513837 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
FAM13A-220ENST00000513837 CUX2O14529 1486 aa14.71□□□□□ -0.06
FAM13A-220ENST00000513837 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
FAM13A-220ENST00000513837 LAMC3Q9Y6N6 1575 aa14.7□□□□□ -0.06
FAM13A-220ENST00000513837 POLA1P09884 1462 aaPredicted RBP14.68□□□□□ -0.06
FAM13A-220ENST00000513837 ITGAEP38570 1179 aa14.67□□□□□ -0.06
FAM13A-220ENST00000513837 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
FAM13A-220ENST00000513837 KIF27Q86VH2 1401 aa14.67□□□□□ -0.06
FAM13A-220ENST00000513837 IGF1RP08069 1367 aa14.66□□□□□ -0.06
FAM13A-220ENST00000513837 ARHGAP35Q9NRY4 1499 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms