RNA–Protein interactions for RNA: ENST00000513799.5

TMED9-206, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-206ENST00000513799 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
TMED9-206ENST00000513799 CCDC180Q9P1Z9 1646 aa25.28■■□□□ 1.64
TMED9-206ENST00000513799 ABCC9O60706 1549 aa24.82■■□□□ 1.56
TMED9-206ENST00000513799 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
TMED9-206ENST00000513799 RB1CC1Q8TDY2 1594 aa23.8■■□□□ 1.4
TMED9-206ENST00000513799 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
TMED9-206ENST00000513799 NACADO15069 1562 aa23.66■■□□□ 1.38
TMED9-206ENST00000513799 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.37
TMED9-206ENST00000513799 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
TMED9-206ENST00000513799 UNC13AQ9UPW8 1703 aa23.24■■□□□ 1.31
TMED9-206ENST00000513799 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
TMED9-206ENST00000513799 PABPN1Q86U42 306 aaKnown RBP eCLIP23.09■■□□□ 1.29
TMED9-206ENST00000513799 BICRAQ9NZM4 1560 aa22.97■■□□□ 1.27
TMED9-206ENST00000513799 DNAJC5BQ9UF47 199 aa22.92■■□□□ 1.26
TMED9-206ENST00000513799 SHROOM4Q9ULL8 1493 aa22.81■■□□□ 1.24
TMED9-206ENST00000513799 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
TMED9-206ENST00000513799 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
TMED9-206ENST00000513799 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
TMED9-206ENST00000513799 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
TMED9-206ENST00000513799 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
TMED9-206ENST00000513799 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
TMED9-206ENST00000513799 PEG3Q9GZU2 1588 aa21.92■■□□□ 1.1
TMED9-206ENST00000513799 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
TMED9-206ENST00000513799 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
TMED9-206ENST00000513799 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
TMED9-206ENST00000513799 WIZO95785 1651 aa21.85■■□□□ 1.09
TMED9-206ENST00000513799 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
TMED9-206ENST00000513799 HMGXB3Q12766 1538 aa21.78■■□□□ 1.08
TMED9-206ENST00000513799 BAZ1BQ9UIG0 1483 aaKnown RBP21.73■■□□□ 1.07
TMED9-206ENST00000513799 TOP2AP11388 1531 aaKnown RBP21.64■■□□□ 1.05
TMED9-206ENST00000513799 SUPT5HO00267 1087 aaKnown RBP21.54■■□□□ 1.04
TMED9-206ENST00000513799 ERCC6Q03468 1493 aa21.51■■□□□ 1.03
TMED9-206ENST00000513799 CCDC88BA6NC98 1476 aa21.36■■□□□ 1.01
TMED9-206ENST00000513799 CUX2O14529 1486 aa21.35■■□□□ 1.01
TMED9-206ENST00000513799 NESP48681 1621 aa21.34■■□□□ 1.01
TMED9-206ENST00000513799 LAMC3Q9Y6N6 1575 aa21.33■■□□□ 1.01
TMED9-206ENST00000513799 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
TMED9-206ENST00000513799 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
TMED9-206ENST00000513799 KIF21AQ7Z4S6 1674 aa21.17■□□□□ 0.98
TMED9-206ENST00000513799 CFTRP13569 1480 aa21.16■□□□□ 0.98
TMED9-206ENST00000513799 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.98
TMED9-206ENST00000513799 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
TMED9-206ENST00000513799 DNAJC5Q9H3Z4 198 aa20.98■□□□□ 0.95
TMED9-206ENST00000513799 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
TMED9-206ENST00000513799 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
TMED9-206ENST00000513799 CEP164Q9UPV0 1460 aa20.97■□□□□ 0.95
TMED9-206ENST00000513799 WDR62O43379 1518 aa20.91■□□□□ 0.94
TMED9-206ENST00000513799 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
TMED9-206ENST00000513799 ABCC8Q09428 1581 aa20.71■□□□□ 0.91
TMED9-206ENST00000513799 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
TMED9-206ENST00000513799 CUX1P39880 1505 aa20.68■□□□□ 0.9
TMED9-206ENST00000513799 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
TMED9-206ENST00000513799 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
TMED9-206ENST00000513799 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
TMED9-206ENST00000513799 TOP2BQ02880 1626 aa20.59■□□□□ 0.89
TMED9-206ENST00000513799 BIVM-ERCC5R4GMW8 1640 aa20.59■□□□□ 0.89
TMED9-206ENST00000513799 POLA1P09884 1462 aaPredicted RBP20.54■□□□□ 0.88
TMED9-206ENST00000513799 FGD5Q6ZNL6 1462 aa20.54■□□□□ 0.88
TMED9-206ENST00000513799 IFT140Q96RY7 1462 aa20.52■□□□□ 0.88
TMED9-206ENST00000513799 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.87
TMED9-206ENST00000513799 RAD54L2Q9Y4B4 1467 aa20.44■□□□□ 0.86
TMED9-206ENST00000513799 SOGA1O94964 1423 aa20.41■□□□□ 0.86
TMED9-206ENST00000513799 WDR97A6NE52 1622 aa20.4■□□□□ 0.86
TMED9-206ENST00000513799 ZNF608Q9ULD9 1512 aaPredicted RBP20.38■□□□□ 0.85
TMED9-206ENST00000513799 OSCARQ8IYS5 282 aa20.38■□□□□ 0.85
TMED9-206ENST00000513799 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
TMED9-206ENST00000513799 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
TMED9-206ENST00000513799 CHIC1Q5VXU3 224 aa20.34■□□□□ 0.85
TMED9-206ENST00000513799 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
TMED9-206ENST00000513799 ABCA5Q8WWZ7 1642 aa20.28■□□□□ 0.84
TMED9-206ENST00000513799 AQRO60306 1485 aaKnown RBP eCLIP20.26■□□□□ 0.836e-8■■■■□ 26.2
TMED9-206ENST00000513799 TDRD9Q8NDG6 1382 aaKnown RBP20.26■□□□□ 0.83
TMED9-206ENST00000513799 CHD1O14646 1710 aa20.21■□□□□ 0.83
TMED9-206ENST00000513799 GAPVD1Q14C86 1478 aa20.19■□□□□ 0.82
TMED9-206ENST00000513799 PBRM1Q86U86 1689 aa20.17■□□□□ 0.82
TMED9-206ENST00000513799 KIF27Q86VH2 1401 aa20.15■□□□□ 0.82
TMED9-206ENST00000513799 GRIN2BQ13224 1484 aa20.15■□□□□ 0.82
TMED9-206ENST00000513799 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
TMED9-206ENST00000513799 FBLN2P98095 1184 aa20.14■□□□□ 0.81
TMED9-206ENST00000513799 RIMBP3CA6NJZ7 1639 aa20.11■□□□□ 0.81
TMED9-206ENST00000513799 RIMBP3BA6NNM3 1639 aa20.11■□□□□ 0.81
TMED9-206ENST00000513799 RIMBP3Q9UFD9 1639 aa20.11■□□□□ 0.81
TMED9-206ENST00000513799 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
TMED9-206ENST00000513799 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
TMED9-206ENST00000513799 MAGI1Q96QZ7 1491 aaPredicted RBP20.08■□□□□ 0.81
TMED9-206ENST00000513799 ADAMTS12P58397 1594 aa20.07■□□□□ 0.8
TMED9-206ENST00000513799 ARHGEF11O15085 1522 aa20.06■□□□□ 0.8
TMED9-206ENST00000513799 IGF1RP08069 1367 aa20.04■□□□□ 0.8
TMED9-206ENST00000513799 CHMP7Q8WUX9 453 aaPredicted RBP20.03■□□□□ 0.8
TMED9-206ENST00000513799 EEA1Q15075 1411 aa20■□□□□ 0.79
TMED9-206ENST00000513799 CUL7Q14999 1698 aa20■□□□□ 0.79
TMED9-206ENST00000513799 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
TMED9-206ENST00000513799 FHAD1B1AJZ9 1412 aa19.97■□□□□ 0.79
TMED9-206ENST00000513799 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
TMED9-206ENST00000513799 FAM9AQ8IZU1 332 aaPredicted RBP19.91■□□□□ 0.78
TMED9-206ENST00000513799 CARMIL1Q5VZK9 1371 aa19.91■□□□□ 0.78
TMED9-206ENST00000513799 PRXQ9BXM0 1461 aa19.91■□□□□ 0.78
TMED9-206ENST00000513799 CLASP1Q7Z460 1538 aa19.91■□□□□ 0.78
TMED9-206ENST00000513799 CSRNP3Q8WYN3 585 aa19.88■□□□□ 0.77
TMED9-206ENST00000513799 CYB5RLQ6IPT4 315 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms