RNA–Protein interactions for RNA: ENST00000513499.5

CCNH-210, Transcript of cyclin H, humanhuman

TSL 3

Gene CCNH, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-210ENST00000513499 AEBP2Q6ZN18 517 aaPredicted RBP26.11■■□□□ 1.77
CCNH-210ENST00000513499 CHIC1Q5VXU3 224 aa25.13■■□□□ 1.61
CCNH-210ENST00000513499 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
CCNH-210ENST00000513499 PHF23Q9BUL5 403 aaPredicted RBP22.12■■□□□ 1.13
CCNH-210ENST00000513499 FOXD1Q16676 465 aa20.65■□□□□ 0.9
CCNH-210ENST00000513499 NISCHQ9Y2I1 1504 aa20.44■□□□□ 0.86
CCNH-210ENST00000513499 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
CCNH-210ENST00000513499 PPP6R1Q9UPN7 881 aa19.65■□□□□ 0.74
CCNH-210ENST00000513499 ADRA2BP18089 450 aa19.63■□□□□ 0.73
CCNH-210ENST00000513499 PIAS4Q8N2W9 510 aaPredicted RBP19.4■□□□□ 0.7
CCNH-210ENST00000513499 MSH5O43196 834 aa19.1■□□□□ 0.65
CCNH-210ENST00000513499 ABCC9O60706 1549 aa18.84■□□□□ 0.61
CCNH-210ENST00000513499 CCDC180Q9P1Z9 1646 aa18.35■□□□□ 0.53
CCNH-210ENST00000513499 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
CCNH-210ENST00000513499 POTEDQ86YR6 584 aa18.03■□□□□ 0.48
CCNH-210ENST00000513499 MAPK8IP2Q13387 824 aaPredicted RBP17.93■□□□□ 0.46
CCNH-210ENST00000513499 PPP4R3CPQ6ZMV5 832 aa17.86■□□□□ 0.45
CCNH-210ENST00000513499 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
CCNH-210ENST00000513499 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
CCNH-210ENST00000513499 DMRT2Q9Y5R5 561 aa17.63■□□□□ 0.41
CCNH-210ENST00000513499 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
CCNH-210ENST00000513499 NACADO15069 1562 aa17.5■□□□□ 0.39
CCNH-210ENST00000513499 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
CCNH-210ENST00000513499 CNKSR2Q8WXI2 1034 aa17.38■□□□□ 0.37
CCNH-210ENST00000513499 BICRAQ9NZM4 1560 aa17.24■□□□□ 0.35
CCNH-210ENST00000513499 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
CCNH-210ENST00000513499 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
CCNH-210ENST00000513499 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
CCNH-210ENST00000513499 HOXD11P31277 338 aaPredicted RBP17.11■□□□□ 0.33
CCNH-210ENST00000513499 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
CCNH-210ENST00000513499 KCNA4P22459 653 aa17.09■□□□□ 0.33
CCNH-210ENST00000513499 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
CCNH-210ENST00000513499 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
CCNH-210ENST00000513499 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
CCNH-210ENST00000513499 CC2D2AQ9P2K1 1620 aa16.94■□□□□ 0.3
CCNH-210ENST00000513499 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
CCNH-210ENST00000513499 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
CCNH-210ENST00000513499 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.28
CCNH-210ENST00000513499 DCAF1Q9Y4B6 1507 aa16.82■□□□□ 0.28
CCNH-210ENST00000513499 SCRIBQ14160 1630 aa16.79■□□□□ 0.28
CCNH-210ENST00000513499 DNAJC5Q9H3Z4 198 aa16.77■□□□□ 0.28
CCNH-210ENST00000513499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.21
CCNH-210ENST00000513499 RNF39Q9H2S5 420 aa16.36■□□□□ 0.21
CCNH-210ENST00000513499 CUX2O14529 1486 aa16.31■□□□□ 0.2
CCNH-210ENST00000513499 ERCC6Q03468 1493 aa16.24■□□□□ 0.19
CCNH-210ENST00000513499 NCAPD3P42695 1498 aa16.23■□□□□ 0.19
CCNH-210ENST00000513499 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
CCNH-210ENST00000513499 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
CCNH-210ENST00000513499 SLC4A2P04920 1241 aa16.16■□□□□ 0.18
CCNH-210ENST00000513499 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
CCNH-210ENST00000513499 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
CCNH-210ENST00000513499 NESP48681 1621 aa16.1■□□□□ 0.17
CCNH-210ENST00000513499 U3KPZ7 1027 aaPredicted RBP16.06■□□□□ 0.16
CCNH-210ENST00000513499 HMGXB3Q12766 1538 aa16.01■□□□□ 0.15
CCNH-210ENST00000513499 SMARCA2P51531 1590 aa16■□□□□ 0.15
CCNH-210ENST00000513499 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
CCNH-210ENST00000513499 BAZ1BQ9UIG0 1483 aaKnown RBP15.92■□□□□ 0.14
CCNH-210ENST00000513499 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
CCNH-210ENST00000513499 THOC2Q8NI27 1593 aaKnown RBP15.91■□□□□ 0.14
CCNH-210ENST00000513499 BAZ1AQ9NRL2 1556 aaPredicted RBP15.84■□□□□ 0.13
CCNH-210ENST00000513499 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.13
CCNH-210ENST00000513499 PEG3Q9GZU2 1588 aa15.82■□□□□ 0.12
CCNH-210ENST00000513499 PDS5BQ9NTI5 1447 aa15.81■□□□□ 0.12
CCNH-210ENST00000513499 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
CCNH-210ENST00000513499 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.12
CCNH-210ENST00000513499 SPINK5Q9NQ38 1064 aaPredicted RBP15.76■□□□□ 0.11
CCNH-210ENST00000513499 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
CCNH-210ENST00000513499 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
CCNH-210ENST00000513499 ZBTB22O15209 634 aa15.73■□□□□ 0.11
CCNH-210ENST00000513499 CAPN15O75808 1086 aa15.71■□□□□ 0.11
CCNH-210ENST00000513499 MYCNP04198 464 aaPredicted RBP15.71■□□□□ 0.11
CCNH-210ENST00000513499 MRC2Q9UBG0 1479 aa15.69■□□□□ 0.1
CCNH-210ENST00000513499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
CCNH-210ENST00000513499 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
CCNH-210ENST00000513499 WDR62O43379 1518 aa15.63■□□□□ 0.09
CCNH-210ENST00000513499 SAMD1Q6SPF0 538 aaPredicted RBP15.63■□□□□ 0.09
CCNH-210ENST00000513499 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
CCNH-210ENST00000513499 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
CCNH-210ENST00000513499 APLP2Q06481 763 aa15.57■□□□□ 0.08
CCNH-210ENST00000513499 CEP164Q9UPV0 1460 aa15.55■□□□□ 0.08
CCNH-210ENST00000513499 FANCD2Q9BXW9 1451 aa15.53■□□□□ 0.08
CCNH-210ENST00000513499 WIZO95785 1651 aa15.51■□□□□ 0.07
CCNH-210ENST00000513499 DSG3P32926 999 aa15.48■□□□□ 0.07
CCNH-210ENST00000513499 CFTRP13569 1480 aa15.47■□□□□ 0.07
CCNH-210ENST00000513499 ZNF219Q9P2Y4 722 aaPredicted RBP15.45■□□□□ 0.06
CCNH-210ENST00000513499 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
CCNH-210ENST00000513499 URB2Q14146 1524 aaKnown RBP15.43■□□□□ 0.06
CCNH-210ENST00000513499 ABCB7O75027 752 aa15.42■□□□□ 0.06
CCNH-210ENST00000513499 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
CCNH-210ENST00000513499 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
CCNH-210ENST00000513499 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
CCNH-210ENST00000513499 RIMBP3CA6NJZ7 1639 aa15.33■□□□□ 0.04
CCNH-210ENST00000513499 RIMBP3BA6NNM3 1639 aa15.33■□□□□ 0.04
CCNH-210ENST00000513499 RIMBP3Q9UFD9 1639 aa15.33■□□□□ 0.04
CCNH-210ENST00000513499 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.04
CCNH-210ENST00000513499 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
CCNH-210ENST00000513499 ARHGEF11O15085 1522 aa15.28■□□□□ 0.04
CCNH-210ENST00000513499 CYB5RLQ6IPT4 315 aa15.28■□□□□ 0.04
CCNH-210ENST00000513499 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
CCNH-210ENST00000513499 POLA2Q14181 598 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms