RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 NISCHQ9Y2I1 1504 aa37.18■■■■□ 3.54
SH3TC1-223ENST00000513495 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
SH3TC1-223ENST00000513495 ABCC9O60706 1549 aa31.71■■■□□ 2.67
SH3TC1-223ENST00000513495 ZCCHC6Q5VYS8 1495 aaKnown RBP31.06■■■□□ 2.56
SH3TC1-223ENST00000513495 DCAF8L2P0C7V8 631 aa30.96■■■□□ 2.55
SH3TC1-223ENST00000513495 NACADO15069 1562 aa30.83■■■□□ 2.53
SH3TC1-223ENST00000513495 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
SH3TC1-223ENST00000513495 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
SH3TC1-223ENST00000513495 RB1CC1Q8TDY2 1594 aa30.77■■■□□ 2.52
SH3TC1-223ENST00000513495 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
SH3TC1-223ENST00000513495 UNC13AQ9UPW8 1703 aa29.99■■■□□ 2.39
SH3TC1-223ENST00000513495 BICRAQ9NZM4 1560 aa29.7■■■□□ 2.35
SH3TC1-223ENST00000513495 PABPN1Q86U42 306 aaKnown RBP eCLIP29.7■■■□□ 2.35
SH3TC1-223ENST00000513495 SHROOM4Q9ULL8 1493 aa29.65■■■□□ 2.34
SH3TC1-223ENST00000513495 EIF4G1Q04637 1599 aaKnown RBP28.94■■■□□ 2.22
SH3TC1-223ENST00000513495 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
SH3TC1-223ENST00000513495 BAZ1AQ9NRL2 1556 aaPredicted RBP28.84■■■□□ 2.21
SH3TC1-223ENST00000513495 SMARCA4P51532 1647 aa28.76■■■□□ 2.2
SH3TC1-223ENST00000513495 CC2D2AQ9P2K1 1620 aa28.71■■■□□ 2.19
SH3TC1-223ENST00000513495 MROH2BQ7Z745 1585 aa28.63■■■□□ 2.17
SH3TC1-223ENST00000513495 DNAJC5BQ9UF47 199 aa28.57■■■□□ 2.16
SH3TC1-223ENST00000513495 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
SH3TC1-223ENST00000513495 RSF1Q96T23 1441 aaPredicted RBP28.48■■■□□ 2.15
SH3TC1-223ENST00000513495 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
SH3TC1-223ENST00000513495 PEG3Q9GZU2 1588 aa28.46■■■□□ 2.15
SH3TC1-223ENST00000513495 NCAPD3P42695 1498 aa28.4■■■□□ 2.14
SH3TC1-223ENST00000513495 WIZO95785 1651 aa28.36■■■□□ 2.13
SH3TC1-223ENST00000513495 BAZ1BQ9UIG0 1483 aaKnown RBP28.33■■■□□ 2.13
SH3TC1-223ENST00000513495 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
SH3TC1-223ENST00000513495 SUPT5HO00267 1087 aaKnown RBP28.17■■■□□ 2.1
SH3TC1-223ENST00000513495 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
SH3TC1-223ENST00000513495 CCDC88BA6NC98 1476 aa27.76■■■□□ 2.03
SH3TC1-223ENST00000513495 LAMC3Q9Y6N6 1575 aa27.62■■■□□ 2.01
SH3TC1-223ENST00000513495 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
SH3TC1-223ENST00000513495 NESP48681 1621 aa27.53■■■□□ 2
SH3TC1-223ENST00000513495 CFTRP13569 1480 aa27.53■■■□□ 2
SH3TC1-223ENST00000513495 PDS5BQ9NTI5 1447 aa27.45■■□□□ 1.98
SH3TC1-223ENST00000513495 PRDM2Q13029 1718 aa27.42■■□□□ 1.98
SH3TC1-223ENST00000513495 ERCC6Q03468 1493 aa27.39■■□□□ 1.98
SH3TC1-223ENST00000513495 FANCD2Q9BXW9 1451 aa27.31■■□□□ 1.96
SH3TC1-223ENST00000513495 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
SH3TC1-223ENST00000513495 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
SH3TC1-223ENST00000513495 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
SH3TC1-223ENST00000513495 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
SH3TC1-223ENST00000513495 ABCC8Q09428 1581 aa27.01■■□□□ 1.92
SH3TC1-223ENST00000513495 WDR62O43379 1518 aa26.97■■□□□ 1.91
SH3TC1-223ENST00000513495 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.91
SH3TC1-223ENST00000513495 DNMBPQ6XZF7 1577 aa26.94■■□□□ 1.9
SH3TC1-223ENST00000513495 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
SH3TC1-223ENST00000513495 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
SH3TC1-223ENST00000513495 CUX2O14529 1486 aa26.89■■□□□ 1.9
SH3TC1-223ENST00000513495 CUX1P39880 1505 aa26.84■■□□□ 1.89
SH3TC1-223ENST00000513495 TOP2BQ02880 1626 aa26.77■■□□□ 1.88
SH3TC1-223ENST00000513495 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
SH3TC1-223ENST00000513495 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
SH3TC1-223ENST00000513495 FGD5Q6ZNL6 1462 aa26.72■■□□□ 1.87
SH3TC1-223ENST00000513495 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
SH3TC1-223ENST00000513495 IFT140Q96RY7 1462 aa26.67■■□□□ 1.86
SH3TC1-223ENST00000513495 SOGA1O94964 1423 aa26.63■■□□□ 1.85
SH3TC1-223ENST00000513495 TRIM41Q8WV44 630 aa26.62■■□□□ 1.85
SH3TC1-223ENST00000513495 RAD54L2Q9Y4B4 1467 aa26.55■■□□□ 1.84
SH3TC1-223ENST00000513495 TARBP1Q13395 1621 aaKnown RBP26.55■■□□□ 1.84
SH3TC1-223ENST00000513495 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
SH3TC1-223ENST00000513495 ABCA10Q8WWZ4 1543 aa26.48■■□□□ 1.83
SH3TC1-223ENST00000513495 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
SH3TC1-223ENST00000513495 ZNF608Q9ULD9 1512 aaPredicted RBP26.42■■□□□ 1.82
SH3TC1-223ENST00000513495 TDRD9Q8NDG6 1382 aaKnown RBP26.4■■□□□ 1.82
SH3TC1-223ENST00000513495 EIF4G3O43432 1585 aaKnown RBP26.4■■□□□ 1.82
SH3TC1-223ENST00000513495 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.812e-7■■■■■ 42.5
SH3TC1-223ENST00000513495 KIF27Q86VH2 1401 aa26.33■■□□□ 1.81
SH3TC1-223ENST00000513495 GAPVD1Q14C86 1478 aa26.33■■□□□ 1.81
SH3TC1-223ENST00000513495 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
SH3TC1-223ENST00000513495 GRIN2BQ13224 1484 aa26.29■■□□□ 1.8
SH3TC1-223ENST00000513495 PBRM1Q86U86 1689 aa26.25■■□□□ 1.79
SH3TC1-223ENST00000513495 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
SH3TC1-223ENST00000513495 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
SH3TC1-223ENST00000513495 EEA1Q15075 1411 aa26.16■■□□□ 1.78
SH3TC1-223ENST00000513495 SNAPC4Q5SXM2 1469 aa26.15■■□□□ 1.78
SH3TC1-223ENST00000513495 RUSC2Q8N2Y8 1516 aa26.1■■□□□ 1.77
SH3TC1-223ENST00000513495 CUL7Q14999 1698 aa26.09■■□□□ 1.77
SH3TC1-223ENST00000513495 IGF1RP08069 1367 aa26.07■■□□□ 1.76
SH3TC1-223ENST00000513495 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
SH3TC1-223ENST00000513495 SYNJ2O15056 1496 aa26.05■■□□□ 1.76
SH3TC1-223ENST00000513495 ADAMTS12P58397 1594 aa26.05■■□□□ 1.76
SH3TC1-223ENST00000513495 FBLN2P98095 1184 aa26.05■■□□□ 1.76
SH3TC1-223ENST00000513495 CHMP7Q8WUX9 453 aaPredicted RBP26.05■■□□□ 1.76
SH3TC1-223ENST00000513495 FAM9AQ8IZU1 332 aaPredicted RBP26.02■■□□□ 1.76
SH3TC1-223ENST00000513495 CSRNP3Q8WYN3 585 aa26.01■■□□□ 1.75
SH3TC1-223ENST00000513495 CARMIL1Q5VZK9 1371 aa25.98■■□□□ 1.75
SH3TC1-223ENST00000513495 CHD1O14646 1710 aa25.98■■□□□ 1.75
SH3TC1-223ENST00000513495 GRIN2AQ12879 1464 aa25.92■■□□□ 1.74
SH3TC1-223ENST00000513495 RAPGEF2Q9Y4G8 1499 aa25.9■■□□□ 1.74
SH3TC1-223ENST00000513495 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
SH3TC1-223ENST00000513495 PRXQ9BXM0 1461 aa25.87■■□□□ 1.73
SH3TC1-223ENST00000513495 KIF21BO75037 1637 aa25.8■■□□□ 1.72
SH3TC1-223ENST00000513495 DNAJC5Q9H3Z4 198 aa25.77■■□□□ 1.72
SH3TC1-223ENST00000513495 NUP160Q12769 1436 aa25.76■■□□□ 1.71
SH3TC1-223ENST00000513495 CEP170Q5SW79 1584 aa25.73■■□□□ 1.71
SH3TC1-223ENST00000513495 GOLGA3Q08378 1498 aa25.72■■□□□ 1.71
SH3TC1-223ENST00000513495 CLASP1Q7Z460 1538 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms