RNA–Protein interactions for RNA: ENST00000513439.5

MTRR-223, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, humanhuman

TSL 1 (best)

Gene MTRR, Length 2,441 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTRR-223ENST00000513439 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
MTRR-223ENST00000513439 CCDC180Q9P1Z9 1646 aa27.31■■□□□ 1.96
MTRR-223ENST00000513439 ZCCHC6Q5VYS8 1495 aaKnown RBP26.62■■□□□ 1.85
MTRR-223ENST00000513439 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
MTRR-223ENST00000513439 DCAF8L2P0C7V8 631 aa26.19■■□□□ 1.78
MTRR-223ENST00000513439 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
MTRR-223ENST00000513439 ABCC9O60706 1549 aa25.64■■□□□ 1.7
MTRR-223ENST00000513439 MYO15BQ96JP2 1530 aa25.59■■□□□ 1.69
MTRR-223ENST00000513439 SUPT5HO00267 1087 aaKnown RBP25.45■■□□□ 1.66
MTRR-223ENST00000513439 NACADO15069 1562 aa25.37■■□□□ 1.65
MTRR-223ENST00000513439 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
MTRR-223ENST00000513439 RB1CC1Q8TDY2 1594 aa25.08■■□□□ 1.61
MTRR-223ENST00000513439 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
MTRR-223ENST00000513439 UNC13AQ9UPW8 1703 aa24.67■■□□□ 1.54
MTRR-223ENST00000513439 CECR2Q9BXF3 1484 aa24.62■■□□□ 1.53
MTRR-223ENST00000513439 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
MTRR-223ENST00000513439 MROH2BQ7Z745 1585 aa24.49■■□□□ 1.51
MTRR-223ENST00000513439 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
MTRR-223ENST00000513439 BAZ1AQ9NRL2 1556 aaPredicted RBP24.36■■□□□ 1.49
MTRR-223ENST00000513439 WIZO95785 1651 aa24.33■■□□□ 1.49
MTRR-223ENST00000513439 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.48
MTRR-223ENST00000513439 SMARCA4P51532 1647 aa24.22■■□□□ 1.47
MTRR-223ENST00000513439 HRCP23327 699 aa24.15■■□□□ 1.46
MTRR-223ENST00000513439 TOP2AP11388 1531 aaKnown RBP24.01■■□□□ 1.43
MTRR-223ENST00000513439 PEG3Q9GZU2 1588 aa23.86■■□□□ 1.41
MTRR-223ENST00000513439 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
MTRR-223ENST00000513439 CCDC88BA6NC98 1476 aa23.83■■□□□ 1.41
MTRR-223ENST00000513439 SMARCA2P51531 1590 aa23.83■■□□□ 1.4
MTRR-223ENST00000513439 EIF4G1Q04637 1599 aaKnown RBP23.76■■□□□ 1.39
MTRR-223ENST00000513439 ATAD2BQ9ULI0 1458 aa23.74■■□□□ 1.39
MTRR-223ENST00000513439 LOC105371045A0A1W2PR82 267 aa23.67■■□□□ 1.38
MTRR-223ENST00000513439 BAZ1BQ9UIG0 1483 aaKnown RBP23.63■■□□□ 1.37
MTRR-223ENST00000513439 PCGF6Q9BYE7 350 aa23.59■■□□□ 1.37
MTRR-223ENST00000513439 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
MTRR-223ENST00000513439 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
MTRR-223ENST00000513439 ABCC8Q09428 1581 aa23.49■■□□□ 1.35
MTRR-223ENST00000513439 NCAPD3P42695 1498 aa23.45■■□□□ 1.34
MTRR-223ENST00000513439 HMGXB3Q12766 1538 aa23.41■■□□□ 1.34
MTRR-223ENST00000513439 PELP1Q8IZL8 1130 aaKnown RBP23.4■■□□□ 1.34
MTRR-223ENST00000513439 WRNQ14191 1432 aaPredicted RBP eCLIP23.24■■□□□ 1.31
MTRR-223ENST00000513439 EHMT2Q96KQ7 1210 aa23.22■■□□□ 1.31
MTRR-223ENST00000513439 CC2D2AQ9P2K1 1620 aa23.17■■□□□ 1.3
MTRR-223ENST00000513439 SYNJ1O43426 1573 aa23.14■■□□□ 1.3
MTRR-223ENST00000513439 SOGA1O94964 1423 aa23.14■■□□□ 1.29
MTRR-223ENST00000513439 RUSC2Q8N2Y8 1516 aa23.05■■□□□ 1.28
MTRR-223ENST00000513439 CFTRP13569 1480 aa23.05■■□□□ 1.28
MTRR-223ENST00000513439 EEA1Q15075 1411 aa23.05■■□□□ 1.28
MTRR-223ENST00000513439 CSRNP3Q8WYN3 585 aa23■■□□□ 1.27
MTRR-223ENST00000513439 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
MTRR-223ENST00000513439 BIVM-ERCC5R4GMW8 1640 aa22.94■■□□□ 1.26
MTRR-223ENST00000513439 PRDM2Q13029 1718 aa22.92■■□□□ 1.26
MTRR-223ENST00000513439 TRIM26Q12899 539 aaPredicted RBP22.91■■□□□ 1.26
MTRR-223ENST00000513439 CADPSQ9ULU8 1353 aa22.9■■□□□ 1.26
MTRR-223ENST00000513439 CUX1P39880 1505 aa22.86■■□□□ 1.25
MTRR-223ENST00000513439 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
MTRR-223ENST00000513439 SCAF1Q9H7N4 1312 aaKnown RBP22.81■■□□□ 1.24
MTRR-223ENST00000513439 GOLGA3Q08378 1498 aa22.8■■□□□ 1.24
MTRR-223ENST00000513439 ZEB1P37275 1124 aaPredicted RBP22.79■■□□□ 1.24
MTRR-223ENST00000513439 UBTFP17480 764 aaKnown RBP22.78■■□□□ 1.24
MTRR-223ENST00000513439 CEP164Q9UPV0 1460 aa22.75■■□□□ 1.23
MTRR-223ENST00000513439 KIF21BO75037 1637 aa22.75■■□□□ 1.23
MTRR-223ENST00000513439 CEP162Q5TB80 1403 aa22.75■■□□□ 1.23
MTRR-223ENST00000513439 FANCD2Q9BXW9 1451 aa22.66■■□□□ 1.22
MTRR-223ENST00000513439 NESP48681 1621 aa22.65■■□□□ 1.22
MTRR-223ENST00000513439 RAPGEF2Q9Y4G8 1499 aa22.63■■□□□ 1.21
MTRR-223ENST00000513439 DNAJC5BQ9UF47 199 aa22.61■■□□□ 1.21
MTRR-223ENST00000513439 KIF27Q86VH2 1401 aa22.61■■□□□ 1.21
MTRR-223ENST00000513439 LAMC3Q9Y6N6 1575 aa22.57■■□□□ 1.2
MTRR-223ENST00000513439 FGD5Q6ZNL6 1462 aa22.55■■□□□ 1.2
MTRR-223ENST00000513439 PRXQ9BXM0 1461 aa22.55■■□□□ 1.2
MTRR-223ENST00000513439 MYT1Q01538 1121 aa22.53■■□□□ 1.2
MTRR-223ENST00000513439 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.19
MTRR-223ENST00000513439 CUX2O14529 1486 aa22.49■■□□□ 1.19
MTRR-223ENST00000513439 DNMBPQ6XZF7 1577 aa22.49■■□□□ 1.19
MTRR-223ENST00000513439 CLIP1P30622 1438 aa22.48■■□□□ 1.19
MTRR-223ENST00000513439 TOPBP1Q92547 1522 aa22.45■■□□□ 1.19
MTRR-223ENST00000513439 IGF1RP08069 1367 aa22.41■■□□□ 1.18
MTRR-223ENST00000513439 PDS5BQ9NTI5 1447 aa22.41■■□□□ 1.18
MTRR-223ENST00000513439 POLA1P09884 1462 aaPredicted RBP22.38■■□□□ 1.17
MTRR-223ENST00000513439 RANGAP1P46060 587 aaPredicted RBP22.38■■□□□ 1.17
MTRR-223ENST00000513439 URB2Q14146 1524 aaKnown RBP22.37■■□□□ 1.17
MTRR-223ENST00000513439 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
MTRR-223ENST00000513439 KIF21AQ7Z4S6 1674 aa22.34■■□□□ 1.17
MTRR-223ENST00000513439 ABCA10Q8WWZ4 1543 aa22.33■■□□□ 1.16
MTRR-223ENST00000513439 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
MTRR-223ENST00000513439 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
MTRR-223ENST00000513439 ACIN1Q9UKV3 1341 aaKnown RBP22.3■■□□□ 1.16
MTRR-223ENST00000513439 CARMIL1Q5VZK9 1371 aa22.3■■□□□ 1.16
MTRR-223ENST00000513439 WDR97A6NE52 1622 aa22.2■■□□□ 1.14
MTRR-223ENST00000513439 ARAP1Q96P48 1450 aa22.2■■□□□ 1.14
MTRR-223ENST00000513439 NEUROD1Q13562 356 aa22.19■■□□□ 1.14
MTRR-223ENST00000513439 APLP2Q06481 763 aa22.16■■□□□ 1.14
MTRR-223ENST00000513439 ARHGAP35Q9NRY4 1499 aa22.13■■□□□ 1.13
MTRR-223ENST00000513439 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
MTRR-223ENST00000513439 CUL7Q14999 1698 aa22.12■■□□□ 1.13
MTRR-223ENST00000513439 ABCA5Q8WWZ7 1642 aa22.1■■□□□ 1.13
MTRR-223ENST00000513439 MRC2Q9UBG0 1479 aa22.09■■□□□ 1.13
MTRR-223ENST00000513439 GTF3C3Q9Y5Q9 886 aa22.08■■□□□ 1.13
MTRR-223ENST00000513439 TARBP1Q13395 1621 aaKnown RBP22.08■■□□□ 1.12
MTRR-223ENST00000513439 GAPVD1Q14C86 1478 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms