RNA–Protein interactions for RNA: ENST00000512907.5

ZFYVE16-212, Transcript of zinc finger FYVE-type containing 16, humanhuman

TSL 2

Gene ZFYVE16, Length 5,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-212ENST00000512907 NISCHQ9Y2I1 1504 aa11.91□□□□□ -0.5
ZFYVE16-212ENST00000512907 CCDC180Q9P1Z9 1646 aa10.51□□□□□ -0.73
ZFYVE16-212ENST00000512907 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
ZFYVE16-212ENST00000512907 DCAF1Q9Y4B6 1507 aa9.98□□□□□ -0.81
ZFYVE16-212ENST00000512907 MYO15BQ96JP2 1530 aa9.92□□□□□ -0.82
ZFYVE16-212ENST00000512907 NACADO15069 1562 aa9.83□□□□□ -0.84
ZFYVE16-212ENST00000512907 ABCC9O60706 1549 aa9.81□□□□□ -0.84
ZFYVE16-212ENST00000512907 DCAF8L2P0C7V8 631 aa9.78□□□□□ -0.84
ZFYVE16-212ENST00000512907 RB1CC1Q8TDY2 1594 aa9.74□□□□□ -0.85
ZFYVE16-212ENST00000512907 SLC24A1O60721 1099 aa9.66□□□□□ -0.86
ZFYVE16-212ENST00000512907 SHROOM4Q9ULL8 1493 aa9.49□□□□□ -0.89
ZFYVE16-212ENST00000512907 SCRIBQ14160 1630 aa9.47□□□□□ -0.89
ZFYVE16-212ENST00000512907 UNC13AQ9UPW8 1703 aa9.28□□□□□ -0.92
ZFYVE16-212ENST00000512907 BAZ1AQ9NRL2 1556 aaPredicted RBP9.27□□□□□ -0.93
ZFYVE16-212ENST00000512907 BICRAQ9NZM4 1560 aa9.25□□□□□ -0.93
ZFYVE16-212ENST00000512907 FAM9AQ8IZU1 332 aaPredicted RBP9.22□□□□□ -0.93
ZFYVE16-212ENST00000512907 PABPN1Q86U42 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
ZFYVE16-212ENST00000512907 SUPT5HO00267 1087 aaKnown RBP9.18□□□□□ -0.94
ZFYVE16-212ENST00000512907 RSF1Q96T23 1441 aaPredicted RBP9.17□□□□□ -0.94
ZFYVE16-212ENST00000512907 SMARCA4P51532 1647 aa9.15□□□□□ -0.94
ZFYVE16-212ENST00000512907 EHMT2Q96KQ7 1210 aa9.14□□□□□ -0.95
ZFYVE16-212ENST00000512907 SMARCA2P51531 1590 aa9.13□□□□□ -0.95
ZFYVE16-212ENST00000512907 CECR2Q9BXF3 1484 aa9.12□□□□□ -0.95
ZFYVE16-212ENST00000512907 MROH2BQ7Z745 1585 aa9.1□□□□□ -0.95
ZFYVE16-212ENST00000512907 PEG3Q9GZU2 1588 aa9.09□□□□□ -0.95
ZFYVE16-212ENST00000512907 MYT1Q01538 1121 aa9.07□□□□□ -0.96
ZFYVE16-212ENST00000512907 TOP2AP11388 1531 aaKnown RBP9.05□□□□□ -0.96
ZFYVE16-212ENST00000512907 EIF4G1Q04637 1599 aaKnown RBP9.05□□□□□ -0.96
ZFYVE16-212ENST00000512907 ATAD2BQ9ULI0 1458 aa9.03□□□□□ -0.96
ZFYVE16-212ENST00000512907 NCAPD3P42695 1498 aa9.03□□□□□ -0.96
ZFYVE16-212ENST00000512907 HMGXB3Q12766 1538 aa9.02□□□□□ -0.97
ZFYVE16-212ENST00000512907 BAZ1BQ9UIG0 1483 aaKnown RBP9.02□□□□□ -0.97
ZFYVE16-212ENST00000512907 WIZO95785 1651 aa8.99□□□□□ -0.97
ZFYVE16-212ENST00000512907 CC2D2AQ9P2K1 1620 aa8.9□□□□□ -0.98
ZFYVE16-212ENST00000512907 PELP1Q8IZL8 1130 aaKnown RBP8.88□□□□□ -0.99
ZFYVE16-212ENST00000512907 CCDC88BA6NC98 1476 aa8.88□□□□□ -0.99
ZFYVE16-212ENST00000512907 ERICH6Q7L0X2 663 aa8.82□□□□□ -1
ZFYVE16-212ENST00000512907 TTBK1Q5TCY1 1321 aaPredicted RBP8.79□□□□□ -1
ZFYVE16-212ENST00000512907 CHIC1Q5VXU3 224 aa8.79□□□□□ -1
ZFYVE16-212ENST00000512907 CADPSQ9ULU8 1353 aa8.78□□□□□ -1
ZFYVE16-212ENST00000512907 CFTRP13569 1480 aa8.77□□□□□ -1.01
ZFYVE16-212ENST00000512907 DAXXQ9UER7 740 aaPredicted RBP8.77□□□□□ -1.01
ZFYVE16-212ENST00000512907 TRIM41Q8WV44 630 aa8.76□□□□□ -1.01
ZFYVE16-212ENST00000512907 LAMC3Q9Y6N6 1575 aa8.74□□□□□ -1.01
ZFYVE16-212ENST00000512907 PDS5BQ9NTI5 1447 aa8.73□□□□□ -1.01
ZFYVE16-212ENST00000512907 ABCC8Q09428 1581 aa8.72□□□□□ -1.01
ZFYVE16-212ENST00000512907 PRDM2Q13029 1718 aa8.71□□□□□ -1.02
ZFYVE16-212ENST00000512907 EEA1Q15075 1411 aa8.71□□□□□ -1.02
ZFYVE16-212ENST00000512907 WRNQ14191 1432 aaPredicted RBP eCLIP8.7□□□□□ -1.02
ZFYVE16-212ENST00000512907 PLPPR3Q6T4P5 718 aa8.67□□□□□ -1.02
ZFYVE16-212ENST00000512907 FANCD2Q9BXW9 1451 aa8.64□□□□□ -1.03
ZFYVE16-212ENST00000512907 CEP164Q9UPV0 1460 aa8.64□□□□□ -1.03
ZFYVE16-212ENST00000512907 RTN4Q9NQC3 1192 aaKnown RBP8.62□□□□□ -1.03
ZFYVE16-212ENST00000512907 TOP2BQ02880 1626 aa8.61□□□□□ -1.03
ZFYVE16-212ENST00000512907 BIVM-ERCC5R4GMW8 1640 aa8.61□□□□□ -1.03
ZFYVE16-212ENST00000512907 PRKCSHP14314 528 aaPredicted RBP8.6□□□□□ -1.03
ZFYVE16-212ENST00000512907 DNMBPQ6XZF7 1577 aa8.59□□□□□ -1.03
ZFYVE16-212ENST00000512907 MRC2Q9UBG0 1479 aa8.56□□□□□ -1.04
ZFYVE16-212ENST00000512907 DNAJC5BQ9UF47 199 aa8.56□□□□□ -1.04
ZFYVE16-212ENST00000512907 KIF27Q86VH2 1401 aa8.56□□□□□ -1.04
ZFYVE16-212ENST00000512907 ERCC6Q03468 1493 aa8.55□□□□□ -1.04
ZFYVE16-212ENST00000512907 SYNJ1O43426 1573 aa8.54□□□□□ -1.04
ZFYVE16-212ENST00000512907 CUX1P39880 1505 aa8.54□□□□□ -1.04
ZFYVE16-212ENST00000512907 RANGAP1P46060 587 aaPredicted RBP8.54□□□□□ -1.04
ZFYVE16-212ENST00000512907 CSRNP3Q8WYN3 585 aa8.53□□□□□ -1.04
ZFYVE16-212ENST00000512907 TOPBP1Q92547 1522 aa8.53□□□□□ -1.04
ZFYVE16-212ENST00000512907 NESP48681 1621 aa8.52□□□□□ -1.04
ZFYVE16-212ENST00000512907 WDR97A6NE52 1622 aa8.52□□□□□ -1.05
ZFYVE16-212ENST00000512907 FGD5Q6ZNL6 1462 aa8.5□□□□□ -1.05
ZFYVE16-212ENST00000512907 SOGA1O94964 1423 aa8.49□□□□□ -1.05
ZFYVE16-212ENST00000512907 ABCA10Q8WWZ4 1543 aa8.48□□□□□ -1.05
ZFYVE16-212ENST00000512907 IFT140Q96RY7 1462 aa8.48□□□□□ -1.05
ZFYVE16-212ENST00000512907 WDR62O43379 1518 aa8.48□□□□□ -1.05
ZFYVE16-212ENST00000512907 GOLGA3Q08378 1498 aa8.47□□□□□ -1.05
ZFYVE16-212ENST00000512907 URB2Q14146 1524 aaKnown RBP8.47□□□□□ -1.05
ZFYVE16-212ENST00000512907 CUX2O14529 1486 aa8.46□□□□□ -1.06
ZFYVE16-212ENST00000512907 POLA1P09884 1462 aaPredicted RBP8.46□□□□□ -1.06
ZFYVE16-212ENST00000512907 KIF21AQ7Z4S6 1674 aa8.46□□□□□ -1.06
ZFYVE16-212ENST00000512907 KIF21BO75037 1637 aa8.45□□□□□ -1.06
ZFYVE16-212ENST00000512907 ERICH3Q5RHP9 1530 aa8.45□□□□□ -1.06
ZFYVE16-212ENST00000512907 NCBP3Q53F19 620 aaKnown RBP8.45□□□□□ -1.06
ZFYVE16-212ENST00000512907 TNIKQ9UKE5 1360 aa8.43□□□□□ -1.06
ZFYVE16-212ENST00000512907 CUL7Q14999 1698 aa8.41□□□□□ -1.06
ZFYVE16-212ENST00000512907 UBTFP17480 764 aaKnown RBP8.4□□□□□ -1.06
ZFYVE16-212ENST00000512907 GAPVD1Q14C86 1478 aa8.39□□□□□ -1.07
ZFYVE16-212ENST00000512907 PRXQ9BXM0 1461 aa8.39□□□□□ -1.07
ZFYVE16-212ENST00000512907 RAPGEF2Q9Y4G8 1499 aa8.39□□□□□ -1.07
ZFYVE16-212ENST00000512907 THOC2Q8NI27 1593 aaKnown RBP8.39□□□□□ -1.07
ZFYVE16-212ENST00000512907 CARMIL1Q5VZK9 1371 aa8.39□□□□□ -1.07
ZFYVE16-212ENST00000512907 GRIN2BQ13224 1484 aa8.38□□□□□ -1.07
ZFYVE16-212ENST00000512907 IGF1RP08069 1367 aa8.38□□□□□ -1.07
ZFYVE16-212ENST00000512907 APLP2Q06481 763 aa8.37□□□□□ -1.07
ZFYVE16-212ENST00000512907 RAD54L2Q9Y4B4 1467 aa8.36□□□□□ -1.07
ZFYVE16-212ENST00000512907 TARBP1Q13395 1621 aaKnown RBP8.36□□□□□ -1.07
ZFYVE16-212ENST00000512907 ABCA5Q8WWZ7 1642 aa8.36□□□□□ -1.07
ZFYVE16-212ENST00000512907 FHAD1B1AJZ9 1412 aa8.36□□□□□ -1.07
ZFYVE16-212ENST00000512907 EIF5BO60841 1220 aaKnown RBP8.35□□□□□ -1.07
ZFYVE16-212ENST00000512907 MAGI1Q96QZ7 1491 aaPredicted RBP8.34□□□□□ -1.07
ZFYVE16-212ENST00000512907 RUSC2Q8N2Y8 1516 aa8.33□□□□□ -1.08
ZFYVE16-212ENST00000512907 LOC105371045A0A1W2PR82 267 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms