RNA–Protein interactions for RNA: ENST00000512677.1

PIK3R4-208, Transcript of phosphoinositide-3-kinase regulatory subunit 4, humanhuman

TSL 3

Gene PIK3R4, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3R4-208ENST00000512677 AEBP2Q6ZN18 517 aaPredicted RBP17.83■□□□□ 0.44
PIK3R4-208ENST00000512677 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
PIK3R4-208ENST00000512677 SENP3Q9H4L4 574 aaPredicted RBP15.08■□□□□ 0
PIK3R4-208ENST00000512677 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
PIK3R4-208ENST00000512677 NISCHQ9Y2I1 1504 aa14.18□□□□□ -0.14
PIK3R4-208ENST00000512677 FOXD1Q16676 465 aa14.11□□□□□ -0.15
PIK3R4-208ENST00000512677 PLPPR3Q6T4P5 718 aa13.68□□□□□ -0.22
PIK3R4-208ENST00000512677 ADRA2BP18089 450 aa13.39□□□□□ -0.27
PIK3R4-208ENST00000512677 PPP6R1Q9UPN7 881 aa13.38□□□□□ -0.27
PIK3R4-208ENST00000512677 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
PIK3R4-208ENST00000512677 MSH5O43196 834 aa13.04□□□□□ -0.32
PIK3R4-208ENST00000512677 CCDC180Q9P1Z9 1646 aa12.6□□□□□ -0.39
PIK3R4-208ENST00000512677 POTEDQ86YR6 584 aa12.52□□□□□ -0.41
PIK3R4-208ENST00000512677 ABCC9O60706 1549 aa12.4□□□□□ -0.42
PIK3R4-208ENST00000512677 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
PIK3R4-208ENST00000512677 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
PIK3R4-208ENST00000512677 SCAF1Q9H7N4 1312 aaKnown RBP12.08□□□□□ -0.48
PIK3R4-208ENST00000512677 DMRT2Q9Y5R5 561 aa11.98□□□□□ -0.49
PIK3R4-208ENST00000512677 NACADO15069 1562 aa11.92□□□□□ -0.5
PIK3R4-208ENST00000512677 RB1CC1Q8TDY2 1594 aa11.92□□□□□ -0.5
PIK3R4-208ENST00000512677 DCAF8L2P0C7V8 631 aa11.9□□□□□ -0.5
PIK3R4-208ENST00000512677 MYO15BQ96JP2 1530 aa11.89□□□□□ -0.51
PIK3R4-208ENST00000512677 DCAF1Q9Y4B6 1507 aa11.81□□□□□ -0.52
PIK3R4-208ENST00000512677 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
PIK3R4-208ENST00000512677 DCAF8L1A6NGE4 600 aa11.75□□□□□ -0.53
PIK3R4-208ENST00000512677 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
PIK3R4-208ENST00000512677 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
PIK3R4-208ENST00000512677 UNC13AQ9UPW8 1703 aa11.58□□□□□ -0.56
PIK3R4-208ENST00000512677 HOXD11P31277 338 aaPredicted RBP11.57□□□□□ -0.56
PIK3R4-208ENST00000512677 PABPN1Q86U42 306 aaKnown RBP eCLIP11.56□□□□□ -0.56
PIK3R4-208ENST00000512677 DNAJC5BQ9UF47 199 aa11.56□□□□□ -0.56
PIK3R4-208ENST00000512677 RNF216Q9NWF9 866 aaPredicted RBP11.55□□□□□ -0.56
PIK3R4-208ENST00000512677 BICRAQ9NZM4 1560 aa11.54□□□□□ -0.56
PIK3R4-208ENST00000512677 SHROOM4Q9ULL8 1493 aa11.54□□□□□ -0.56
PIK3R4-208ENST00000512677 KCNA4P22459 653 aa11.52□□□□□ -0.57
PIK3R4-208ENST00000512677 NPM3O75607 178 aaKnown RBP11.51□□□□□ -0.57
PIK3R4-208ENST00000512677 SCRIBQ14160 1630 aa11.42□□□□□ -0.58
PIK3R4-208ENST00000512677 CACNB1Q02641 598 aaPredicted RBP11.22□□□□□ -0.61
PIK3R4-208ENST00000512677 EIF4G1Q04637 1599 aaKnown RBP11.21□□□□□ -0.61
PIK3R4-208ENST00000512677 CC2D2AQ9P2K1 1620 aa11.2□□□□□ -0.62
PIK3R4-208ENST00000512677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.19□□□□□ -0.62
PIK3R4-208ENST00000512677 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
PIK3R4-208ENST00000512677 CECR2Q9BXF3 1484 aa11.14□□□□□ -0.63
PIK3R4-208ENST00000512677 BAZ1AQ9NRL2 1556 aaPredicted RBP11.03□□□□□ -0.64
PIK3R4-208ENST00000512677 NCAPD3P42695 1498 aa11□□□□□ -0.65
PIK3R4-208ENST00000512677 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
PIK3R4-208ENST00000512677 C1QBPQ07021 282 aaKnown RBP10.97□□□□□ -0.65
PIK3R4-208ENST00000512677 SMARCA4P51532 1647 aa10.95□□□□□ -0.66
PIK3R4-208ENST00000512677 ATAD2BQ9ULI0 1458 aa10.95□□□□□ -0.66
PIK3R4-208ENST00000512677 SLC4A2P04920 1241 aa10.93□□□□□ -0.66
PIK3R4-208ENST00000512677 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
PIK3R4-208ENST00000512677 HMGXB3Q12766 1538 aa10.92□□□□□ -0.66
PIK3R4-208ENST00000512677 PEG3Q9GZU2 1588 aa10.9□□□□□ -0.66
PIK3R4-208ENST00000512677 BAZ1BQ9UIG0 1483 aaKnown RBP10.89□□□□□ -0.67
PIK3R4-208ENST00000512677 SLC4A1APQ9BWU0 796 aaKnown RBP10.89□□□□□ -0.67
PIK3R4-208ENST00000512677 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
PIK3R4-208ENST00000512677 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
PIK3R4-208ENST00000512677 RSF1Q96T23 1441 aaPredicted RBP10.79□□□□□ -0.68
PIK3R4-208ENST00000512677 CAPN15O75808 1086 aa10.78□□□□□ -0.68
PIK3R4-208ENST00000512677 NESP48681 1621 aa10.71□□□□□ -0.69
PIK3R4-208ENST00000512677 ERCC6Q03468 1493 aa10.71□□□□□ -0.69
PIK3R4-208ENST00000512677 PDS5BQ9NTI5 1447 aa10.71□□□□□ -0.69
PIK3R4-208ENST00000512677 WIZO95785 1651 aa10.69□□□□□ -0.7
PIK3R4-208ENST00000512677 LAMC3Q9Y6N6 1575 aa10.69□□□□□ -0.7
PIK3R4-208ENST00000512677 CADPSQ9ULU8 1353 aa10.69□□□□□ -0.7
PIK3R4-208ENST00000512677 TOP2AP11388 1531 aaKnown RBP10.68□□□□□ -0.7
PIK3R4-208ENST00000512677 TRHP20396 242 aaPredicted RBP10.68□□□□□ -0.7
PIK3R4-208ENST00000512677 CUX2O14529 1486 aa10.62□□□□□ -0.71
PIK3R4-208ENST00000512677 ABCB7O75027 752 aa10.61□□□□□ -0.71
PIK3R4-208ENST00000512677 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
PIK3R4-208ENST00000512677 ZBTB22O15209 634 aa10.59□□□□□ -0.71
PIK3R4-208ENST00000512677 MYCNP04198 464 aaPredicted RBP10.59□□□□□ -0.71
PIK3R4-208ENST00000512677 CFTRP13569 1480 aa10.59□□□□□ -0.71
PIK3R4-208ENST00000512677 THOC2Q8NI27 1593 aaKnown RBP10.57□□□□□ -0.72
PIK3R4-208ENST00000512677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.57□□□□□ -0.72
PIK3R4-208ENST00000512677 HNRNPUL2Q1KMD3 747 aaKnown RBP10.57□□□□□ -0.72
PIK3R4-208ENST00000512677 DSG3P32926 999 aa10.56□□□□□ -0.72
PIK3R4-208ENST00000512677 SAMD1Q6SPF0 538 aaPredicted RBP10.56□□□□□ -0.72
PIK3R4-208ENST00000512677 CCDC88BA6NC98 1476 aa10.55□□□□□ -0.72
PIK3R4-208ENST00000512677 CEP164Q9UPV0 1460 aa10.54□□□□□ -0.72
PIK3R4-208ENST00000512677 KIF21AQ7Z4S6 1674 aa10.53□□□□□ -0.72
PIK3R4-208ENST00000512677 SUPT5HO00267 1087 aaKnown RBP10.52□□□□□ -0.73
PIK3R4-208ENST00000512677 APLP2Q06481 763 aa10.52□□□□□ -0.73
PIK3R4-208ENST00000512677 FANCD2Q9BXW9 1451 aa10.52□□□□□ -0.73
PIK3R4-208ENST00000512677 MRC2Q9UBG0 1479 aa10.51□□□□□ -0.73
PIK3R4-208ENST00000512677 ZNF219Q9P2Y4 722 aaPredicted RBP10.49□□□□□ -0.73
PIK3R4-208ENST00000512677 ABCC8Q09428 1581 aa10.48□□□□□ -0.73
PIK3R4-208ENST00000512677 DNAJC5Q9H3Z4 198 aa10.46□□□□□ -0.73
PIK3R4-208ENST00000512677 WDR62O43379 1518 aa10.45□□□□□ -0.74
PIK3R4-208ENST00000512677 ATF5Q9Y2D1 282 aaPredicted RBP10.45□□□□□ -0.74
PIK3R4-208ENST00000512677 EHMT2Q96KQ7 1210 aa10.4□□□□□ -0.74
PIK3R4-208ENST00000512677 URB2Q14146 1524 aaKnown RBP10.38□□□□□ -0.75
PIK3R4-208ENST00000512677 PRDM2Q13029 1718 aa10.38□□□□□ -0.75
PIK3R4-208ENST00000512677 POLA2Q14181 598 aa10.36□□□□□ -0.75
PIK3R4-208ENST00000512677 IFT140Q96RY7 1462 aa10.34□□□□□ -0.75
PIK3R4-208ENST00000512677 DNMBPQ6XZF7 1577 aa10.32□□□□□ -0.76
PIK3R4-208ENST00000512677 TOPBP1Q92547 1522 aa10.32□□□□□ -0.76
PIK3R4-208ENST00000512677 SOGA1O94964 1423 aa10.25□□□□□ -0.77
PIK3R4-208ENST00000512677 ZNF608Q9ULD9 1512 aaPredicted RBP10.24□□□□□ -0.77
PIK3R4-208ENST00000512677 CSRNP3Q8WYN3 585 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms