RNA–Protein interactions for RNA: ENST00000512426.5

CCND3-218, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-218ENST00000512426 NISCHQ9Y2I1 1504 aa30.04■■■□□ 2.4
CCND3-218ENST00000512426 ABCC9O60706 1549 aa27■■□□□ 1.91
CCND3-218ENST00000512426 CCDC180Q9P1Z9 1646 aa26.98■■□□□ 1.91
CCND3-218ENST00000512426 RB1CC1Q8TDY2 1594 aa25.69■■□□□ 1.7
CCND3-218ENST00000512426 NACADO15069 1562 aa25.5■■□□□ 1.67
CCND3-218ENST00000512426 DCAF8L2P0C7V8 631 aa25.35■■□□□ 1.65
CCND3-218ENST00000512426 DNAJC5BQ9UF47 199 aa25.34■■□□□ 1.65
CCND3-218ENST00000512426 MYO15BQ96JP2 1530 aa25.14■■□□□ 1.62
CCND3-218ENST00000512426 PABPN1Q86U42 306 aaKnown RBP eCLIP25.12■■□□□ 1.61
CCND3-218ENST00000512426 UNC13AQ9UPW8 1703 aa25.1■■□□□ 1.61
CCND3-218ENST00000512426 BICRAQ9NZM4 1560 aa24.95■■□□□ 1.58
CCND3-218ENST00000512426 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
CCND3-218ENST00000512426 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
CCND3-218ENST00000512426 SHROOM4Q9ULL8 1493 aa24.6■■□□□ 1.53
CCND3-218ENST00000512426 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
CCND3-218ENST00000512426 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.49
CCND3-218ENST00000512426 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.49
CCND3-218ENST00000512426 CECR2Q9BXF3 1484 aa24.32■■□□□ 1.48
CCND3-218ENST00000512426 NCAPD3P42695 1498 aa23.54■■□□□ 1.36
CCND3-218ENST00000512426 ATAD2BQ9ULI0 1458 aa23.46■■□□□ 1.35
CCND3-218ENST00000512426 SMARCA4P51532 1647 aa23.44■■□□□ 1.34
CCND3-218ENST00000512426 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
CCND3-218ENST00000512426 HMGXB3Q12766 1538 aa23.37■■□□□ 1.33
CCND3-218ENST00000512426 BAZ1AQ9NRL2 1556 aaPredicted RBP23.32■■□□□ 1.32
CCND3-218ENST00000512426 ERCC6Q03468 1493 aa23.31■■□□□ 1.32
CCND3-218ENST00000512426 DNAJC5Q9H3Z4 198 aa23.3■■□□□ 1.32
CCND3-218ENST00000512426 CUX2O14529 1486 aa23.28■■□□□ 1.32
CCND3-218ENST00000512426 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
CCND3-218ENST00000512426 PEG3Q9GZU2 1588 aa23.21■■□□□ 1.31
CCND3-218ENST00000512426 NESP48681 1621 aa23.19■■□□□ 1.3
CCND3-218ENST00000512426 MROH2BQ7Z745 1585 aa23.14■■□□□ 1.3
CCND3-218ENST00000512426 LAMC3Q9Y6N6 1575 aa23.02■■□□□ 1.28
CCND3-218ENST00000512426 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
CCND3-218ENST00000512426 KIF21AQ7Z4S6 1674 aa22.89■■□□□ 1.25
CCND3-218ENST00000512426 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
CCND3-218ENST00000512426 WIZO95785 1651 aa22.87■■□□□ 1.25
CCND3-218ENST00000512426 CADPSQ9ULU8 1353 aa22.82■■□□□ 1.24
CCND3-218ENST00000512426 MRC2Q9UBG0 1479 aa22.69■■□□□ 1.22
CCND3-218ENST00000512426 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
CCND3-218ENST00000512426 WDR62O43379 1518 aa22.64■■□□□ 1.21
CCND3-218ENST00000512426 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
CCND3-218ENST00000512426 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
CCND3-218ENST00000512426 FANCD2Q9BXW9 1451 aa22.56■■□□□ 1.2
CCND3-218ENST00000512426 CFTRP13569 1480 aa22.55■■□□□ 1.2
CCND3-218ENST00000512426 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.17
CCND3-218ENST00000512426 PRDM2Q13029 1718 aa22.33■■□□□ 1.17
CCND3-218ENST00000512426 CCDC88BA6NC98 1476 aa22.32■■□□□ 1.16
CCND3-218ENST00000512426 TRIM41Q8WV44 630 aa22.26■■□□□ 1.15
CCND3-218ENST00000512426 OSCARQ8IYS5 282 aa22.21■■□□□ 1.15
CCND3-218ENST00000512426 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
CCND3-218ENST00000512426 TOPBP1Q92547 1522 aa22.13■■□□□ 1.13
CCND3-218ENST00000512426 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
CCND3-218ENST00000512426 ABCC8Q09428 1581 aa22.08■■□□□ 1.13
CCND3-218ENST00000512426 DNMBPQ6XZF7 1577 aa22.06■■□□□ 1.12
CCND3-218ENST00000512426 EIF4G3O43432 1585 aaKnown RBP22■■□□□ 1.11
CCND3-218ENST00000512426 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
CCND3-218ENST00000512426 RIMBP3CA6NJZ7 1639 aa21.94■■□□□ 1.1
CCND3-218ENST00000512426 RIMBP3BA6NNM3 1639 aa21.94■■□□□ 1.1
CCND3-218ENST00000512426 RIMBP3Q9UFD9 1639 aa21.94■■□□□ 1.1
CCND3-218ENST00000512426 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.12e-7■■■■■ 38.1
CCND3-218ENST00000512426 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
CCND3-218ENST00000512426 ARHGEF11O15085 1522 aa21.86■■□□□ 1.09
CCND3-218ENST00000512426 CHD1O14646 1710 aa21.85■■□□□ 1.09
CCND3-218ENST00000512426 RAD54L2Q9Y4B4 1467 aa21.83■■□□□ 1.08
CCND3-218ENST00000512426 SOGA1O94964 1423 aa21.8■■□□□ 1.08
CCND3-218ENST00000512426 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
CCND3-218ENST00000512426 TDRD9Q8NDG6 1382 aaKnown RBP21.77■■□□□ 1.08
CCND3-218ENST00000512426 FBLN2P98095 1184 aa21.76■■□□□ 1.07
CCND3-218ENST00000512426 CUX1P39880 1505 aa21.75■■□□□ 1.07
CCND3-218ENST00000512426 WDR97A6NE52 1622 aa21.72■■□□□ 1.07
CCND3-218ENST00000512426 CYB5RLQ6IPT4 315 aa21.69■■□□□ 1.06
CCND3-218ENST00000512426 SNAPC4Q5SXM2 1469 aa21.68■■□□□ 1.06
CCND3-218ENST00000512426 ARAP1Q96P48 1450 aa21.64■■□□□ 1.05
CCND3-218ENST00000512426 MAGI1Q96QZ7 1491 aaPredicted RBP21.63■■□□□ 1.05
CCND3-218ENST00000512426 SUPT5HO00267 1087 aaKnown RBP21.62■■□□□ 1.05
CCND3-218ENST00000512426 GRIN2BQ13224 1484 aa21.62■■□□□ 1.05
CCND3-218ENST00000512426 CHMP7Q8WUX9 453 aaPredicted RBP21.6■■□□□ 1.05
CCND3-218ENST00000512426 CLASP1Q7Z460 1538 aa21.6■■□□□ 1.05
CCND3-218ENST00000512426 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
CCND3-218ENST00000512426 SYNJ2O15056 1496 aa21.56■■□□□ 1.04
CCND3-218ENST00000512426 PBRM1Q86U86 1689 aa21.55■■□□□ 1.04
CCND3-218ENST00000512426 GAPVD1Q14C86 1478 aa21.54■■□□□ 1.04
CCND3-218ENST00000512426 ABCA10Q8WWZ4 1543 aa21.51■■□□□ 1.03
CCND3-218ENST00000512426 ABCA5Q8WWZ7 1642 aa21.5■■□□□ 1.03
CCND3-218ENST00000512426 TRHP20396 242 aaPredicted RBP21.46■■□□□ 1.03
CCND3-218ENST00000512426 WRNQ14191 1432 aaPredicted RBP eCLIP21.43■■□□□ 1.029e-6■■■■■ 50.1
CCND3-218ENST00000512426 BIVM-ERCC5R4GMW8 1640 aa21.4■■□□□ 1.02
CCND3-218ENST00000512426 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
CCND3-218ENST00000512426 GRIN2AQ12879 1464 aa21.35■■□□□ 1.01
CCND3-218ENST00000512426 ADAMTS12P58397 1594 aa21.34■■□□□ 1.01
CCND3-218ENST00000512426 CEP170Q5SW79 1584 aa21.27■■□□□ 1
CCND3-218ENST00000512426 FHAD1B1AJZ9 1412 aa21.27■■□□□ 1
CCND3-218ENST00000512426 NUP160Q12769 1436 aa21.27■■□□□ 1
CCND3-218ENST00000512426 ERCC6L2Q5T890 1561 aa21.26■□□□□ 0.99
CCND3-218ENST00000512426 ERICH3Q5RHP9 1530 aa21.25■□□□□ 0.99
CCND3-218ENST00000512426 SHROOM2Q13796 1616 aa21.2■□□□□ 0.98
CCND3-218ENST00000512426 PRG4Q92954 1404 aaPredicted RBP21.08■□□□□ 0.97
CCND3-218ENST00000512426 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
CCND3-218ENST00000512426 JPH4Q96JJ6 628 aa21.04■□□□□ 0.96
CCND3-218ENST00000512426 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms