RNA–Protein interactions for RNA: ENST00000512004.1

MIB2-228, Transcript of mindbomb E3 ubiquitin protein ligase 2, humanhuman

TSL 4

Gene MIB2, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIB2-228ENST00000512004 NISCHQ9Y2I1 1504 aa38.87■■■■□ 3.81
MIB2-228ENST00000512004 ABCC9O60706 1549 aa35.28■■■■□ 3.24
MIB2-228ENST00000512004 CCDC180Q9P1Z9 1646 aa34.92■■■■□ 3.18
MIB2-228ENST00000512004 DNAJC5BQ9UF47 199 aa33.49■■■□□ 2.95
MIB2-228ENST00000512004 RB1CC1Q8TDY2 1594 aa33.44■■■□□ 2.94
MIB2-228ENST00000512004 NACADO15069 1562 aa33.17■■■□□ 2.9
MIB2-228ENST00000512004 DCAF8L2P0C7V8 631 aa32.98■■■□□ 2.87
MIB2-228ENST00000512004 PABPN1Q86U42 306 aaKnown RBP eCLIP32.86■■■□□ 2.85
MIB2-228ENST00000512004 MYO15BQ96JP2 1530 aa32.68■■■□□ 2.82
MIB2-228ENST00000512004 UNC13AQ9UPW8 1703 aa32.52■■■□□ 2.8
MIB2-228ENST00000512004 BICRAQ9NZM4 1560 aa32.48■■■□□ 2.79
MIB2-228ENST00000512004 ZCCHC6Q5VYS8 1495 aaKnown RBP32.13■■■□□ 2.73
MIB2-228ENST00000512004 DCAF1Q9Y4B6 1507 aa32.12■■■□□ 2.73
MIB2-228ENST00000512004 SHROOM4Q9ULL8 1493 aa32.09■■■□□ 2.73
MIB2-228ENST00000512004 CECR2Q9BXF3 1484 aa31.85■■■□□ 2.69
MIB2-228ENST00000512004 CC2D2AQ9P2K1 1620 aa31.82■■■□□ 2.69
MIB2-228ENST00000512004 SCRIBQ14160 1630 aa31.77■■■□□ 2.68
MIB2-228ENST00000512004 EIF4G1Q04637 1599 aaKnown RBP31.7■■■□□ 2.67
MIB2-228ENST00000512004 DNAJC5Q9H3Z4 198 aa31.02■■■□□ 2.56
MIB2-228ENST00000512004 NCAPD3P42695 1498 aa30.7■■■□□ 2.51
MIB2-228ENST00000512004 CUX2O14529 1486 aa30.59■■■□□ 2.49
MIB2-228ENST00000512004 ATAD2BQ9ULI0 1458 aa30.52■■■□□ 2.48
MIB2-228ENST00000512004 ERCC6Q03468 1493 aa30.49■■■□□ 2.47
MIB2-228ENST00000512004 SMARCA2P51531 1590 aa30.38■■■□□ 2.45
MIB2-228ENST00000512004 HMGXB3Q12766 1538 aa30.36■■■□□ 2.45
MIB2-228ENST00000512004 SMARCA4P51532 1647 aa30.32■■■□□ 2.44
MIB2-228ENST00000512004 NESP48681 1621 aa30.22■■■□□ 2.43
MIB2-228ENST00000512004 BAZ1AQ9NRL2 1556 aaPredicted RBP30.17■■■□□ 2.42
MIB2-228ENST00000512004 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
MIB2-228ENST00000512004 PEG3Q9GZU2 1588 aa30.09■■■□□ 2.41
MIB2-228ENST00000512004 LAMC3Q9Y6N6 1575 aa29.97■■■□□ 2.39
MIB2-228ENST00000512004 MROH2BQ7Z745 1585 aa29.92■■■□□ 2.38
MIB2-228ENST00000512004 THOC2Q8NI27 1593 aaKnown RBP29.92■■■□□ 2.38
MIB2-228ENST00000512004 PDS5BQ9NTI5 1447 aa29.88■■■□□ 2.37
MIB2-228ENST00000512004 CADPSQ9ULU8 1353 aa29.76■■■□□ 2.35
MIB2-228ENST00000512004 KIF21AQ7Z4S6 1674 aa29.7■■■□□ 2.35
MIB2-228ENST00000512004 MRC2Q9UBG0 1479 aa29.59■■■□□ 2.33
MIB2-228ENST00000512004 WDR62O43379 1518 aa29.5■■■□□ 2.31
MIB2-228ENST00000512004 WIZO95785 1651 aa29.47■■■□□ 2.31
MIB2-228ENST00000512004 TRIM41Q8WV44 630 aa29.43■■■□□ 2.3
MIB2-228ENST00000512004 CEP164Q9UPV0 1460 aa29.39■■■□□ 2.3
MIB2-228ENST00000512004 FANCD2Q9BXW9 1451 aa29.36■■■□□ 2.29
MIB2-228ENST00000512004 CFTRP13569 1480 aa29.32■■■□□ 2.28
MIB2-228ENST00000512004 RSF1Q96T23 1441 aaPredicted RBP29.25■■■□□ 2.27
MIB2-228ENST00000512004 OSCARQ8IYS5 282 aa29.22■■■□□ 2.27
MIB2-228ENST00000512004 TOP2AP11388 1531 aaKnown RBP29.14■■■□□ 2.25
MIB2-228ENST00000512004 URB2Q14146 1524 aaKnown RBP29.11■■■□□ 2.25
MIB2-228ENST00000512004 CCDC88BA6NC98 1476 aa28.86■■■□□ 2.21
MIB2-228ENST00000512004 IFT140Q96RY7 1462 aa28.85■■■□□ 2.21
MIB2-228ENST00000512004 ZNF608Q9ULD9 1512 aaPredicted RBP28.8■■■□□ 2.2
MIB2-228ENST00000512004 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
MIB2-228ENST00000512004 TOPBP1Q92547 1522 aa28.74■■■□□ 2.19
MIB2-228ENST00000512004 ABCC8Q09428 1581 aa28.72■■■□□ 2.19
MIB2-228ENST00000512004 RIMBP3CA6NJZ7 1639 aa28.7■■■□□ 2.19
MIB2-228ENST00000512004 RIMBP3BA6NNM3 1639 aa28.7■■■□□ 2.19
MIB2-228ENST00000512004 RIMBP3Q9UFD9 1639 aa28.7■■■□□ 2.19
MIB2-228ENST00000512004 ARHGEF11O15085 1522 aa28.64■■■□□ 2.17
MIB2-228ENST00000512004 DNMBPQ6XZF7 1577 aa28.58■■■□□ 2.17
MIB2-228ENST00000512004 EIF4G3O43432 1585 aaKnown RBP28.54■■■□□ 2.16
MIB2-228ENST00000512004 AQRO60306 1485 aaKnown RBP eCLIP28.53■■■□□ 2.16
MIB2-228ENST00000512004 CYB5RLQ6IPT4 315 aa28.52■■■□□ 2.16
MIB2-228ENST00000512004 TARBP1Q13395 1621 aaKnown RBP28.48■■■□□ 2.15
MIB2-228ENST00000512004 POLA1P09884 1462 aaPredicted RBP28.44■■■□□ 2.14
MIB2-228ENST00000512004 FBLN2P98095 1184 aa28.42■■■□□ 2.14
MIB2-228ENST00000512004 SOGA1O94964 1423 aa28.35■■■□□ 2.13
MIB2-228ENST00000512004 ARAP1Q96P48 1450 aa28.34■■■□□ 2.13
MIB2-228ENST00000512004 RAD54L2Q9Y4B4 1467 aa28.34■■■□□ 2.13
MIB2-228ENST00000512004 CHD1O14646 1710 aa28.33■■■□□ 2.13
MIB2-228ENST00000512004 TDRD9Q8NDG6 1382 aaKnown RBP28.33■■■□□ 2.13
MIB2-228ENST00000512004 TRHP20396 242 aaPredicted RBP28.29■■■□□ 2.12
MIB2-228ENST00000512004 CHMP7Q8WUX9 453 aaPredicted RBP28.21■■■□□ 2.11
MIB2-228ENST00000512004 WDR97A6NE52 1622 aa28.2■■■□□ 2.1
MIB2-228ENST00000512004 FGD5Q6ZNL6 1462 aa28.2■■■□□ 2.1
MIB2-228ENST00000512004 SNAPC4Q5SXM2 1469 aa28.19■■■□□ 2.1
MIB2-228ENST00000512004 MAGI1Q96QZ7 1491 aaPredicted RBP28.15■■■□□ 2.1
MIB2-228ENST00000512004 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
MIB2-228ENST00000512004 GRIN2BQ13224 1484 aa28.12■■■□□ 2.09
MIB2-228ENST00000512004 CUX1P39880 1505 aa28.12■■■□□ 2.09
MIB2-228ENST00000512004 SYNJ1O43426 1573 aa28.07■■■□□ 2.08
MIB2-228ENST00000512004 SYNJ2O15056 1496 aa28.06■■■□□ 2.08
MIB2-228ENST00000512004 GAPVD1Q14C86 1478 aa27.97■■■□□ 2.07
MIB2-228ENST00000512004 ABCA10Q8WWZ4 1543 aa27.9■■■□□ 2.06
MIB2-228ENST00000512004 PBRM1Q86U86 1689 aa27.81■■■□□ 2.04
MIB2-228ENST00000512004 ABCA5Q8WWZ7 1642 aa27.8■■■□□ 2.04
MIB2-228ENST00000512004 WRNQ14191 1432 aaPredicted RBP eCLIP27.75■■■□□ 2.03
MIB2-228ENST00000512004 GRIN2AQ12879 1464 aa27.74■■■□□ 2.03
MIB2-228ENST00000512004 SUPT5HO00267 1087 aaKnown RBP27.7■■■□□ 2.02
MIB2-228ENST00000512004 AEBP2Q6ZN18 517 aaPredicted RBP27.7■■■□□ 2.02
MIB2-228ENST00000512004 NUP160Q12769 1436 aa27.69■■■□□ 2.02
MIB2-228ENST00000512004 FHAD1B1AJZ9 1412 aa27.63■■■□□ 2.01
MIB2-228ENST00000512004 ERCC6L2Q5T890 1561 aa27.63■■■□□ 2.01
MIB2-228ENST00000512004 ADAMTS12P58397 1594 aa27.61■■■□□ 2.01
MIB2-228ENST00000512004 CEP170Q5SW79 1584 aa27.6■■■□□ 2.01
MIB2-228ENST00000512004 TOP2BQ02880 1626 aa27.57■■■□□ 2
MIB2-228ENST00000512004 BIVM-ERCC5R4GMW8 1640 aa27.53■■■□□ 2
MIB2-228ENST00000512004 ERICH3Q5RHP9 1530 aa27.53■■■□□ 2
MIB2-228ENST00000512004 SHROOM2Q13796 1616 aa27.52■■■□□ 2
MIB2-228ENST00000512004 JPH4Q96JJ6 628 aa27.47■■□□□ 1.99
MIB2-228ENST00000512004 PRG4Q92954 1404 aaPredicted RBP27.44■■□□□ 1.98
MIB2-228ENST00000512004 NPM1P06748 294 aaKnown RBP eCLIP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms