RNA–Protein interactions for RNA: ENST00000510746.1

YTHDC1-206, Transcript of YTH domain containing 1, humanhuman

TSL 4

Gene YTHDC1, Length 515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDC1-206ENST00000510746 NISCHQ9Y2I1 1504 aa59.15■■■■■ 7.06
YTHDC1-206ENST00000510746 CCDC180Q9P1Z9 1646 aa52.73■■■■■ 6.03
YTHDC1-206ENST00000510746 ABCC9O60706 1549 aa51.76■■■■■ 5.88
YTHDC1-206ENST00000510746 RB1CC1Q8TDY2 1594 aa49.69■■■■■ 5.54
YTHDC1-206ENST00000510746 NACADO15069 1562 aa49.56■■■■■ 5.52
YTHDC1-206ENST00000510746 DCAF8L2P0C7V8 631 aa49.51■■■■■ 5.52
YTHDC1-206ENST00000510746 ZCCHC6Q5VYS8 1495 aaKnown RBP49.25■■■■■ 5.47
YTHDC1-206ENST00000510746 MYO15BQ96JP2 1530 aa49.15■■■■■ 5.46
YTHDC1-206ENST00000510746 DCAF1Q9Y4B6 1507 aa48.89■■■■■ 5.42
YTHDC1-206ENST00000510746 UNC13AQ9UPW8 1703 aa48.71■■■■■ 5.39
YTHDC1-206ENST00000510746 PABPN1Q86U42 306 aaKnown RBP eCLIP48.31■■■■■ 5.32
YTHDC1-206ENST00000510746 BICRAQ9NZM4 1560 aa48.22■■■■■ 5.31
YTHDC1-206ENST00000510746 SCRIBQ14160 1630 aa48.13■■■■■ 5.3
YTHDC1-206ENST00000510746 DNAJC5BQ9UF47 199 aa47.64■■■■■ 5.22
YTHDC1-206ENST00000510746 SHROOM4Q9ULL8 1493 aa47.59■■■■■ 5.21
YTHDC1-206ENST00000510746 EIF4G1Q04637 1599 aaKnown RBP46.95■■■■■ 5.11
YTHDC1-206ENST00000510746 CC2D2AQ9P2K1 1620 aa46.83■■■■■ 5.09
YTHDC1-206ENST00000510746 CECR2Q9BXF3 1484 aa46.5■■■■■ 5.03
YTHDC1-206ENST00000510746 SMARCA4P51532 1647 aa45.99■■■■■ 4.95
YTHDC1-206ENST00000510746 BAZ1AQ9NRL2 1556 aaPredicted RBP45.87■■■■■ 4.93
YTHDC1-206ENST00000510746 ATAD2BQ9ULI0 1458 aa45.72■■■■■ 4.91
YTHDC1-206ENST00000510746 NCAPD3P42695 1498 aa45.7■■■■■ 4.91
YTHDC1-206ENST00000510746 SMARCA2P51531 1590 aa45.68■■■■■ 4.9
YTHDC1-206ENST00000510746 MROH2BQ7Z745 1585 aa45.61■■■■■ 4.89
YTHDC1-206ENST00000510746 HMGXB3Q12766 1538 aa45.51■■■■■ 4.88
YTHDC1-206ENST00000510746 PEG3Q9GZU2 1588 aa45.5■■■■■ 4.87
YTHDC1-206ENST00000510746 BAZ1BQ9UIG0 1483 aaKnown RBP45.37■■■■■ 4.85
YTHDC1-206ENST00000510746 WIZO95785 1651 aa45.17■■■■■ 4.82
YTHDC1-206ENST00000510746 RSF1Q96T23 1441 aaPredicted RBP44.98■■■■■ 4.79
YTHDC1-206ENST00000510746 NESP48681 1621 aa44.75■■■■■ 4.75
YTHDC1-206ENST00000510746 TOP2AP11388 1531 aaKnown RBP44.62■■■■■ 4.73
YTHDC1-206ENST00000510746 ERCC6Q03468 1493 aa44.62■■■■■ 4.73
YTHDC1-206ENST00000510746 LAMC3Q9Y6N6 1575 aa44.58■■■■■ 4.73
YTHDC1-206ENST00000510746 CADPSQ9ULU8 1353 aa44.36■■■■■ 4.69
YTHDC1-206ENST00000510746 KIF21AQ7Z4S6 1674 aa44.29■■■■■ 4.68
YTHDC1-206ENST00000510746 PDS5BQ9NTI5 1447 aa44.24■■■■■ 4.67
YTHDC1-206ENST00000510746 CUX2O14529 1486 aa44.17■■■■■ 4.66
YTHDC1-206ENST00000510746 THOC2Q8NI27 1593 aaKnown RBP44.13■■■■■ 4.65
YTHDC1-206ENST00000510746 CCDC88BA6NC98 1476 aa44.08■■■■■ 4.65
YTHDC1-206ENST00000510746 CFTRP13569 1480 aa44.08■■■■■ 4.65
YTHDC1-206ENST00000510746 FANCD2Q9BXW9 1451 aa43.89■■■■■ 4.62
YTHDC1-206ENST00000510746 PRDM2Q13029 1718 aa43.89■■■■■ 4.62
YTHDC1-206ENST00000510746 CEP164Q9UPV0 1460 aa43.87■■■■■ 4.61
YTHDC1-206ENST00000510746 MRC2Q9UBG0 1479 aa43.83■■■■■ 4.61
YTHDC1-206ENST00000510746 SUPT5HO00267 1087 aaKnown RBP43.73■■■■■ 4.59
YTHDC1-206ENST00000510746 WDR62O43379 1518 aa43.71■■■■■ 4.59
YTHDC1-206ENST00000510746 URB2Q14146 1524 aaKnown RBP43.49■■■■■ 4.55
YTHDC1-206ENST00000510746 TOPBP1Q92547 1522 aa43.18■■■■■ 4.5
YTHDC1-206ENST00000510746 DNMBPQ6XZF7 1577 aa43.13■■■■■ 4.5
YTHDC1-206ENST00000510746 ABCC8Q09428 1581 aa43.12■■■■■ 4.49
YTHDC1-206ENST00000510746 DNAJC5Q9H3Z4 198 aa43.01■■■■■ 4.48
YTHDC1-206ENST00000510746 IFT140Q96RY7 1462 aa42.93■■■■■ 4.46
YTHDC1-206ENST00000510746 CUX1P39880 1505 aa42.81■■■■■ 4.44
YTHDC1-206ENST00000510746 POLA1P09884 1462 aaPredicted RBP42.8■■■■■ 4.44
YTHDC1-206ENST00000510746 ZNF608Q9ULD9 1512 aaPredicted RBP42.79■■■■■ 4.44
YTHDC1-206ENST00000510746 TARBP1Q13395 1621 aaKnown RBP42.75■■■■■ 4.43
YTHDC1-206ENST00000510746 FGD5Q6ZNL6 1462 aa42.68■■■■■ 4.42
YTHDC1-206ENST00000510746 EIF4G3O43432 1585 aaKnown RBP42.66■■■■■ 4.42
YTHDC1-206ENST00000510746 RAD54L2Q9Y4B4 1467 aa42.63■■■■■ 4.42
YTHDC1-206ENST00000510746 SOGA1O94964 1423 aa42.6■■■■■ 4.41
YTHDC1-206ENST00000510746 AQRO60306 1485 aaKnown RBP eCLIP42.51■■■■■ 4.45e-8■■■■□ 26.3
YTHDC1-206ENST00000510746 WRNQ14191 1432 aaPredicted RBP eCLIP42.43■■■■■ 4.38
YTHDC1-206ENST00000510746 WDR97A6NE52 1622 aa42.41■■■■■ 4.38
YTHDC1-206ENST00000510746 BIVM-ERCC5R4GMW8 1640 aa42.41■■■■■ 4.38
YTHDC1-206ENST00000510746 TDRD9Q8NDG6 1382 aaKnown RBP42.39■■■■■ 4.38
YTHDC1-206ENST00000510746 SYNJ1O43426 1573 aa42.39■■■■■ 4.38
YTHDC1-206ENST00000510746 TOP2BQ02880 1626 aa42.39■■■■■ 4.38
YTHDC1-206ENST00000510746 OSCARQ8IYS5 282 aa42.29■■■■■ 4.36
YTHDC1-206ENST00000510746 ABCA10Q8WWZ4 1543 aa42.23■■■■■ 4.35
YTHDC1-206ENST00000510746 CHD1O14646 1710 aa42.22■■■■■ 4.35
YTHDC1-206ENST00000510746 PBRM1Q86U86 1689 aa42.15■■■■■ 4.34
YTHDC1-206ENST00000510746 ABCA5Q8WWZ7 1642 aa42.13■■■■■ 4.34
YTHDC1-206ENST00000510746 SNAPC4Q5SXM2 1469 aa42.13■■■■■ 4.34
YTHDC1-206ENST00000510746 GRIN2BQ13224 1484 aa42.12■■■■■ 4.33
YTHDC1-206ENST00000510746 GAPVD1Q14C86 1478 aa42.12■■■■■ 4.33
YTHDC1-206ENST00000510746 FBLN2P98095 1184 aa42.04■■■■■ 4.32
YTHDC1-206ENST00000510746 MAGI1Q96QZ7 1491 aaPredicted RBP42.04■■■■■ 4.32
YTHDC1-206ENST00000510746 SYNJ2O15056 1496 aa41.88■■■■■ 4.29
YTHDC1-206ENST00000510746 CHMP7Q8WUX9 453 aaPredicted RBP41.87■■■■■ 4.29
YTHDC1-206ENST00000510746 ADAMTS12P58397 1594 aa41.75■■■■■ 4.27
YTHDC1-206ENST00000510746 RIMBP3CA6NJZ7 1639 aa41.74■■■■■ 4.27
YTHDC1-206ENST00000510746 RIMBP3BA6NNM3 1639 aa41.74■■■■■ 4.27
YTHDC1-206ENST00000510746 RIMBP3Q9UFD9 1639 aa41.74■■■■■ 4.27
YTHDC1-206ENST00000510746 ERICH3Q5RHP9 1530 aa41.73■■■■■ 4.27
YTHDC1-206ENST00000510746 ARHGEF11O15085 1522 aa41.67■■■■■ 4.26
YTHDC1-206ENST00000510746 CLASP1Q7Z460 1538 aa41.66■■■■■ 4.26
YTHDC1-206ENST00000510746 GRIN2AQ12879 1464 aa41.6■■■■■ 4.25
YTHDC1-206ENST00000510746 TRIM41Q8WV44 630 aa41.6■■■■■ 4.25
YTHDC1-206ENST00000510746 FHAD1B1AJZ9 1412 aa41.6■■■■■ 4.25
YTHDC1-206ENST00000510746 KIF27Q86VH2 1401 aa41.53■■■■■ 4.24
YTHDC1-206ENST00000510746 CEP170Q5SW79 1584 aa41.45■■■■■ 4.23
YTHDC1-206ENST00000510746 NUP160Q12769 1436 aa41.4■■■■■ 4.22
YTHDC1-206ENST00000510746 IGF1RP08069 1367 aa41.37■■■■■ 4.21
YTHDC1-206ENST00000510746 CUL7Q14999 1698 aa41.36■■■■■ 4.21
YTHDC1-206ENST00000510746 ARAP1Q96P48 1450 aa41.33■■■■■ 4.21
YTHDC1-206ENST00000510746 CYB5RLQ6IPT4 315 aa41.26■■■■■ 4.2
YTHDC1-206ENST00000510746 SHROOM2Q13796 1616 aa41.17■■■■■ 4.18
YTHDC1-206ENST00000510746 RUSC2Q8N2Y8 1516 aa41.16■■■■■ 4.18
YTHDC1-206ENST00000510746 CARMIL1Q5VZK9 1371 aa41.14■■■■■ 4.18
YTHDC1-206ENST00000510746 ERCC6L2Q5T890 1561 aa41.12■■■■■ 4.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms