RNA–Protein interactions for RNA: ENST00000510503.5

CCND3-213, Transcript of cyclin D3, humanhuman

TSL 3 BASIC

Gene CCND3, Length 1,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-213ENST00000510503 NISCHQ9Y2I1 1504 aa41.11■■■■■ 4.17
CCND3-213ENST00000510503 CCDC180Q9P1Z9 1646 aa36.9■■■■□ 3.5
CCND3-213ENST00000510503 ABCC9O60706 1549 aa36.82■■■■□ 3.48
CCND3-213ENST00000510503 RB1CC1Q8TDY2 1594 aa35.05■■■■□ 3.2
CCND3-213ENST00000510503 NACADO15069 1562 aa34.82■■■■□ 3.16
CCND3-213ENST00000510503 DCAF8L2P0C7V8 631 aa34.59■■■■□ 3.13
CCND3-213ENST00000510503 DNAJC5BQ9UF47 199 aa34.53■■■■□ 3.12
CCND3-213ENST00000510503 UNC13AQ9UPW8 1703 aa34.41■■■■□ 3.1
CCND3-213ENST00000510503 MYO15BQ96JP2 1530 aa34.35■■■■□ 3.09
CCND3-213ENST00000510503 PABPN1Q86U42 306 aaKnown RBP eCLIP34.26■■■■□ 3.08
CCND3-213ENST00000510503 BICRAQ9NZM4 1560 aa34.12■■■■□ 3.05
CCND3-213ENST00000510503 ZCCHC6Q5VYS8 1495 aaKnown RBP34.09■■■■□ 3.05
CCND3-213ENST00000510503 DCAF1Q9Y4B6 1507 aa33.94■■■■□ 3.02
CCND3-213ENST00000510503 SCRIBQ14160 1630 aa33.63■■■□□ 2.97
CCND3-213ENST00000510503 SHROOM4Q9ULL8 1493 aa33.53■■■□□ 2.96
CCND3-213ENST00000510503 CC2D2AQ9P2K1 1620 aa33.3■■■□□ 2.92
CCND3-213ENST00000510503 EIF4G1Q04637 1599 aaKnown RBP33.22■■■□□ 2.91
CCND3-213ENST00000510503 CECR2Q9BXF3 1484 aa33.13■■■□□ 2.89
CCND3-213ENST00000510503 NCAPD3P42695 1498 aa32.14■■■□□ 2.74
CCND3-213ENST00000510503 SMARCA4P51532 1647 aa32.09■■■□□ 2.73
CCND3-213ENST00000510503 ATAD2BQ9ULI0 1458 aa32.07■■■□□ 2.72
CCND3-213ENST00000510503 SMARCA2P51531 1590 aa31.95■■■□□ 2.71
CCND3-213ENST00000510503 HMGXB3Q12766 1538 aa31.92■■■□□ 2.7
CCND3-213ENST00000510503 BAZ1AQ9NRL2 1556 aaPredicted RBP31.89■■■□□ 2.7
CCND3-213ENST00000510503 PEG3Q9GZU2 1588 aa31.77■■■□□ 2.68
CCND3-213ENST00000510503 BAZ1BQ9UIG0 1483 aaKnown RBP31.73■■■□□ 2.67
CCND3-213ENST00000510503 ERCC6Q03468 1493 aa31.72■■■□□ 2.67
CCND3-213ENST00000510503 MROH2BQ7Z745 1585 aa31.71■■■□□ 2.67
CCND3-213ENST00000510503 NESP48681 1621 aa31.68■■■□□ 2.66
CCND3-213ENST00000510503 CUX2O14529 1486 aa31.66■■■□□ 2.66
CCND3-213ENST00000510503 DNAJC5Q9H3Z4 198 aa31.59■■■□□ 2.65
CCND3-213ENST00000510503 LAMC3Q9Y6N6 1575 aa31.43■■■□□ 2.62
CCND3-213ENST00000510503 THOC2Q8NI27 1593 aaKnown RBP31.37■■■□□ 2.61
CCND3-213ENST00000510503 WIZO95785 1651 aa31.37■■■□□ 2.61
CCND3-213ENST00000510503 KIF21AQ7Z4S6 1674 aa31.32■■■□□ 2.6
CCND3-213ENST00000510503 PDS5BQ9NTI5 1447 aa31.17■■■□□ 2.58
CCND3-213ENST00000510503 CADPSQ9ULU8 1353 aa31.15■■■□□ 2.58
CCND3-213ENST00000510503 RSF1Q96T23 1441 aaPredicted RBP31.03■■■□□ 2.56
CCND3-213ENST00000510503 MRC2Q9UBG0 1479 aa30.95■■■□□ 2.54
CCND3-213ENST00000510503 WDR62O43379 1518 aa30.91■■■□□ 2.54
CCND3-213ENST00000510503 TOP2AP11388 1531 aaKnown RBP30.91■■■□□ 2.54
CCND3-213ENST00000510503 CFTRP13569 1480 aa30.83■■■□□ 2.53
CCND3-213ENST00000510503 CEP164Q9UPV0 1460 aa30.83■■■□□ 2.53
CCND3-213ENST00000510503 FANCD2Q9BXW9 1451 aa30.82■■■□□ 2.52
CCND3-213ENST00000510503 PRDM2Q13029 1718 aa30.62■■■□□ 2.49
CCND3-213ENST00000510503 URB2Q14146 1524 aaKnown RBP30.6■■■□□ 2.49
CCND3-213ENST00000510503 CCDC88BA6NC98 1476 aa30.57■■■□□ 2.48
CCND3-213ENST00000510503 TOPBP1Q92547 1522 aa30.26■■■□□ 2.43
CCND3-213ENST00000510503 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
CCND3-213ENST00000510503 TRIM41Q8WV44 630 aa30.21■■■□□ 2.43
CCND3-213ENST00000510503 IFT140Q96RY7 1462 aa30.2■■■□□ 2.43
CCND3-213ENST00000510503 OSCARQ8IYS5 282 aa30.19■■■□□ 2.42
CCND3-213ENST00000510503 DNMBPQ6XZF7 1577 aa30.15■■■□□ 2.42
CCND3-213ENST00000510503 ABCC8Q09428 1581 aa30.13■■■□□ 2.41
CCND3-213ENST00000510503 EIF4G3O43432 1585 aaKnown RBP30.07■■■□□ 2.4
CCND3-213ENST00000510503 TARBP1Q13395 1621 aaKnown RBP30.04■■■□□ 2.4
CCND3-213ENST00000510503 POLA1P09884 1462 aaPredicted RBP29.95■■■□□ 2.39
CCND3-213ENST00000510503 AQRO60306 1485 aaKnown RBP eCLIP29.93■■■□□ 2.384e-7■■■■■ 38.3
CCND3-213ENST00000510503 RIMBP3CA6NJZ7 1639 aa29.91■■■□□ 2.38
CCND3-213ENST00000510503 RIMBP3BA6NNM3 1639 aa29.91■■■□□ 2.38
CCND3-213ENST00000510503 RIMBP3Q9UFD9 1639 aa29.91■■■□□ 2.38
CCND3-213ENST00000510503 SUPT5HO00267 1087 aaKnown RBP29.88■■■□□ 2.37
CCND3-213ENST00000510503 CHD1O14646 1710 aa29.87■■■□□ 2.37
CCND3-213ENST00000510503 RAD54L2Q9Y4B4 1467 aa29.86■■■□□ 2.37
CCND3-213ENST00000510503 ARHGEF11O15085 1522 aa29.79■■■□□ 2.36
CCND3-213ENST00000510503 CUX1P39880 1505 aa29.78■■■□□ 2.36
CCND3-213ENST00000510503 FGD5Q6ZNL6 1462 aa29.78■■■□□ 2.36
CCND3-213ENST00000510503 SOGA1O94964 1423 aa29.78■■■□□ 2.36
CCND3-213ENST00000510503 TDRD9Q8NDG6 1382 aaKnown RBP29.73■■■□□ 2.35
CCND3-213ENST00000510503 WDR97A6NE52 1622 aa29.66■■■□□ 2.34
CCND3-213ENST00000510503 FBLN2P98095 1184 aa29.64■■■□□ 2.34
CCND3-213ENST00000510503 SNAPC4Q5SXM2 1469 aa29.61■■■□□ 2.33
CCND3-213ENST00000510503 GRIN2BQ13224 1484 aa29.51■■■□□ 2.31
CCND3-213ENST00000510503 ARAP1Q96P48 1450 aa29.51■■■□□ 2.31
CCND3-213ENST00000510503 MAGI1Q96QZ7 1491 aaPredicted RBP29.51■■■□□ 2.31
CCND3-213ENST00000510503 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
CCND3-213ENST00000510503 CYB5RLQ6IPT4 315 aa29.5■■■□□ 2.31
CCND3-213ENST00000510503 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
CCND3-213ENST00000510503 ABCA5Q8WWZ7 1642 aa29.44■■■□□ 2.3
CCND3-213ENST00000510503 GAPVD1Q14C86 1478 aa29.43■■■□□ 2.3
CCND3-213ENST00000510503 ABCA10Q8WWZ4 1543 aa29.42■■■□□ 2.3
CCND3-213ENST00000510503 CHMP7Q8WUX9 453 aaPredicted RBP29.42■■■□□ 2.3
CCND3-213ENST00000510503 SYNJ1O43426 1573 aa29.42■■■□□ 2.3
CCND3-213ENST00000510503 SYNJ2O15056 1496 aa29.42■■■□□ 2.3
CCND3-213ENST00000510503 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
CCND3-213ENST00000510503 TOP2BQ02880 1626 aa29.31■■■□□ 2.28
CCND3-213ENST00000510503 WRNQ14191 1432 aaPredicted RBP eCLIP29.27■■■□□ 2.289e-6■■■■■ 50.1
CCND3-213ENST00000510503 ADAMTS12P58397 1594 aa29.18■■■□□ 2.26
CCND3-213ENST00000510503 GRIN2AQ12879 1464 aa29.16■■■□□ 2.26
CCND3-213ENST00000510503 TRHP20396 242 aaPredicted RBP29.12■■■□□ 2.25
CCND3-213ENST00000510503 CEP170Q5SW79 1584 aa29.1■■■□□ 2.25
CCND3-213ENST00000510503 ERCC6L2Q5T890 1561 aa29.08■■■□□ 2.25
CCND3-213ENST00000510503 NUP160Q12769 1436 aa29.06■■■□□ 2.24
CCND3-213ENST00000510503 ERICH3Q5RHP9 1530 aa29.05■■■□□ 2.24
CCND3-213ENST00000510503 FHAD1B1AJZ9 1412 aa29.03■■■□□ 2.24
CCND3-213ENST00000510503 SHROOM2Q13796 1616 aa28.98■■■□□ 2.23
CCND3-213ENST00000510503 RUSC2Q8N2Y8 1516 aa28.79■■■□□ 2.2
CCND3-213ENST00000510503 PRG4Q92954 1404 aaPredicted RBP28.76■■■□□ 2.19
CCND3-213ENST00000510503 JPH4Q96JJ6 628 aa28.72■■■□□ 2.19
CCND3-213ENST00000510503 IGF1RP08069 1367 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms