RNA–Protein interactions for RNA: ENST00000510126.2

PTK2-204, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-204ENST00000510126 NISCHQ9Y2I1 1504 aa32.57■■■□□ 2.8
PTK2-204ENST00000510126 ABCC9O60706 1549 aa30.01■■■□□ 2.4
PTK2-204ENST00000510126 CCDC180Q9P1Z9 1646 aa29.37■■■□□ 2.29
PTK2-204ENST00000510126 DNAJC5BQ9UF47 199 aa28.78■■■□□ 2.2
PTK2-204ENST00000510126 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
PTK2-204ENST00000510126 PABPN1Q86U42 306 aaKnown RBP eCLIP27.93■■■□□ 2.06
PTK2-204ENST00000510126 NACADO15069 1562 aa27.9■■■□□ 2.06
PTK2-204ENST00000510126 DCAF8L2P0C7V8 631 aa27.76■■■□□ 2.03
PTK2-204ENST00000510126 UNC13AQ9UPW8 1703 aa27.7■■■□□ 2.02
PTK2-204ENST00000510126 BICRAQ9NZM4 1560 aa27.56■■■□□ 2
PTK2-204ENST00000510126 MYO15BQ96JP2 1530 aa27.32■■□□□ 1.96
PTK2-204ENST00000510126 CC2D2AQ9P2K1 1620 aa27.06■■□□□ 1.92
PTK2-204ENST00000510126 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
PTK2-204ENST00000510126 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
PTK2-204ENST00000510126 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
PTK2-204ENST00000510126 EIF4G1Q04637 1599 aaKnown RBP26.86■■□□□ 1.89
PTK2-204ENST00000510126 SCRIBQ14160 1630 aa26.83■■□□□ 1.89
PTK2-204ENST00000510126 DCAF1Q9Y4B6 1507 aa26.8■■□□□ 1.88
PTK2-204ENST00000510126 DNAJC5Q9H3Z4 198 aa26.67■■□□□ 1.86
PTK2-204ENST00000510126 CUX2O14529 1486 aa25.98■■□□□ 1.75
PTK2-204ENST00000510126 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
PTK2-204ENST00000510126 NCAPD3P42695 1498 aa25.82■■□□□ 1.72
PTK2-204ENST00000510126 ATAD2BQ9ULI0 1458 aa25.7■■□□□ 1.7
PTK2-204ENST00000510126 NESP48681 1621 aa25.69■■□□□ 1.7
PTK2-204ENST00000510126 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
PTK2-204ENST00000510126 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
PTK2-204ENST00000510126 SMARCA2P51531 1590 aa25.5■■□□□ 1.67
PTK2-204ENST00000510126 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.66
PTK2-204ENST00000510126 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
PTK2-204ENST00000510126 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
PTK2-204ENST00000510126 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
PTK2-204ENST00000510126 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
PTK2-204ENST00000510126 BAZ1AQ9NRL2 1556 aaPredicted RBP25.26■■□□□ 1.63
PTK2-204ENST00000510126 PEG3Q9GZU2 1588 aa25.24■■□□□ 1.63
PTK2-204ENST00000510126 MROH2BQ7Z745 1585 aa25.16■■□□□ 1.62
PTK2-204ENST00000510126 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
PTK2-204ENST00000510126 CADPSQ9ULU8 1353 aa25.02■■□□□ 1.6
PTK2-204ENST00000510126 MRC2Q9UBG0 1479 aa24.99■■□□□ 1.59
PTK2-204ENST00000510126 WDR62O43379 1518 aa24.96■■□□□ 1.59
PTK2-204ENST00000510126 WIZO95785 1651 aa24.82■■□□□ 1.56
PTK2-204ENST00000510126 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
PTK2-204ENST00000510126 OSCARQ8IYS5 282 aa24.75■■□□□ 1.55
PTK2-204ENST00000510126 FANCD2Q9BXW9 1451 aa24.73■■□□□ 1.55
PTK2-204ENST00000510126 CFTRP13569 1480 aa24.63■■□□□ 1.53
PTK2-204ENST00000510126 URB2Q14146 1524 aaKnown RBP24.62■■□□□ 1.53
PTK2-204ENST00000510126 RIMBP3CA6NJZ7 1639 aa24.53■■□□□ 1.52
PTK2-204ENST00000510126 RIMBP3BA6NNM3 1639 aa24.53■■□□□ 1.52
PTK2-204ENST00000510126 RIMBP3Q9UFD9 1639 aa24.53■■□□□ 1.52
PTK2-204ENST00000510126 ZNF608Q9ULD9 1512 aaPredicted RBP24.43■■□□□ 1.5
PTK2-204ENST00000510126 RSF1Q96T23 1441 aaPredicted RBP24.43■■□□□ 1.5
PTK2-204ENST00000510126 TOP2AP11388 1531 aaKnown RBP24.39■■□□□ 1.49
PTK2-204ENST00000510126 ARHGEF11O15085 1522 aa24.38■■□□□ 1.49
PTK2-204ENST00000510126 IFT140Q96RY7 1462 aa24.3■■□□□ 1.48
PTK2-204ENST00000510126 CYB5RLQ6IPT4 315 aa24.26■■□□□ 1.47
PTK2-204ENST00000510126 PRDM2Q13029 1718 aa24.26■■□□□ 1.47
PTK2-204ENST00000510126 TOPBP1Q92547 1522 aa24.22■■□□□ 1.47
PTK2-204ENST00000510126 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
PTK2-204ENST00000510126 EIF4G3O43432 1585 aaKnown RBP24.18■■□□□ 1.46
PTK2-204ENST00000510126 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
PTK2-204ENST00000510126 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.45
PTK2-204ENST00000510126 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
PTK2-204ENST00000510126 CHD1O14646 1710 aa24.12■■□□□ 1.45
PTK2-204ENST00000510126 TARBP1Q13395 1621 aaKnown RBP24.06■■□□□ 1.44
PTK2-204ENST00000510126 DNMBPQ6XZF7 1577 aa24.04■■□□□ 1.44
PTK2-204ENST00000510126 FBLN2P98095 1184 aa24.02■■□□□ 1.44
PTK2-204ENST00000510126 ABCC8Q09428 1581 aa24.01■■□□□ 1.43
PTK2-204ENST00000510126 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
PTK2-204ENST00000510126 RAD54L2Q9Y4B4 1467 aa23.93■■□□□ 1.42
PTK2-204ENST00000510126 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
PTK2-204ENST00000510126 CLASP1Q7Z460 1538 aa23.84■■□□□ 1.41
PTK2-204ENST00000510126 SOGA1O94964 1423 aa23.82■■□□□ 1.4
PTK2-204ENST00000510126 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
PTK2-204ENST00000510126 AEBP2Q6ZN18 517 aaPredicted RBP23.74■■□□□ 1.39
PTK2-204ENST00000510126 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
PTK2-204ENST00000510126 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
PTK2-204ENST00000510126 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
PTK2-204ENST00000510126 MAGI1Q96QZ7 1491 aaPredicted RBP23.66■■□□□ 1.38
PTK2-204ENST00000510126 CUX1P39880 1505 aa23.64■■□□□ 1.38
PTK2-204ENST00000510126 GRIN2BQ13224 1484 aa23.63■■□□□ 1.37
PTK2-204ENST00000510126 WDR97A6NE52 1622 aa23.63■■□□□ 1.37
PTK2-204ENST00000510126 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
PTK2-204ENST00000510126 GAPVD1Q14C86 1478 aa23.6■■□□□ 1.37
PTK2-204ENST00000510126 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
PTK2-204ENST00000510126 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
PTK2-204ENST00000510126 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
PTK2-204ENST00000510126 ABCA10Q8WWZ4 1543 aa23.39■■□□□ 1.34
PTK2-204ENST00000510126 GRIN2AQ12879 1464 aa23.35■■□□□ 1.33
PTK2-204ENST00000510126 CEP170Q5SW79 1584 aa23.34■■□□□ 1.33
PTK2-204ENST00000510126 NUP160Q12769 1436 aa23.3■■□□□ 1.32
PTK2-204ENST00000510126 ADAMTS12P58397 1594 aa23.27■■□□□ 1.32
PTK2-204ENST00000510126 KIF13AQ9H1H9 1805 aa23.26■■□□□ 1.31
PTK2-204ENST00000510126 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
PTK2-204ENST00000510126 FHAD1B1AJZ9 1412 aa23.16■■□□□ 1.3
PTK2-204ENST00000510126 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
PTK2-204ENST00000510126 PRG4Q92954 1404 aaPredicted RBP23.13■■□□□ 1.29
PTK2-204ENST00000510126 JPH4Q96JJ6 628 aa23.09■■□□□ 1.29
PTK2-204ENST00000510126 FAM69CQ0P6D2 419 aa23.08■■□□□ 1.29
PTK2-204ENST00000510126 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
PTK2-204ENST00000510126 BIVM-ERCC5R4GMW8 1640 aa23.07■■□□□ 1.28
PTK2-204ENST00000510126 ERICH3Q5RHP9 1530 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms