RNA–Protein interactions for RNA: ENST00000510124.5

CDHR2-205, Transcript of cadherin related family member 2, humanhuman

TSL 5

Gene CDHR2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR2-205ENST00000510124 NISCHQ9Y2I1 1504 aa54.06■■■■■ 6.24
CDHR2-205ENST00000510124 CCDC180Q9P1Z9 1646 aa48.16■■■■■ 5.3
CDHR2-205ENST00000510124 ABCC9O60706 1549 aa47.82■■■■■ 5.25
CDHR2-205ENST00000510124 RB1CC1Q8TDY2 1594 aa45.64■■■■■ 4.9
CDHR2-205ENST00000510124 DCAF8L2P0C7V8 631 aa45.61■■■■■ 4.89
CDHR2-205ENST00000510124 NACADO15069 1562 aa45.45■■■■■ 4.87
CDHR2-205ENST00000510124 MYO15BQ96JP2 1530 aa44.95■■■■■ 4.79
CDHR2-205ENST00000510124 ZCCHC6Q5VYS8 1495 aaKnown RBP44.91■■■■■ 4.78
CDHR2-205ENST00000510124 PABPN1Q86U42 306 aaKnown RBP eCLIP44.69■■■■■ 4.74
CDHR2-205ENST00000510124 DCAF1Q9Y4B6 1507 aa44.6■■■■■ 4.73
CDHR2-205ENST00000510124 UNC13AQ9UPW8 1703 aa44.57■■■■■ 4.73
CDHR2-205ENST00000510124 DNAJC5BQ9UF47 199 aa44.39■■■■■ 4.7
CDHR2-205ENST00000510124 BICRAQ9NZM4 1560 aa44.31■■■■■ 4.68
CDHR2-205ENST00000510124 SCRIBQ14160 1630 aa44.08■■■■■ 4.65
CDHR2-205ENST00000510124 SHROOM4Q9ULL8 1493 aa43.67■■■■■ 4.58
CDHR2-205ENST00000510124 EIF4G1Q04637 1599 aaKnown RBP43.19■■■■■ 4.5
CDHR2-205ENST00000510124 CC2D2AQ9P2K1 1620 aa43.15■■■■■ 4.5
CDHR2-205ENST00000510124 CECR2Q9BXF3 1484 aa42.99■■■■■ 4.47
CDHR2-205ENST00000510124 SMARCA4P51532 1647 aa42.04■■■■■ 4.32
CDHR2-205ENST00000510124 NCAPD3P42695 1498 aa41.98■■■■■ 4.31
CDHR2-205ENST00000510124 ATAD2BQ9ULI0 1458 aa41.98■■■■■ 4.31
CDHR2-205ENST00000510124 BAZ1AQ9NRL2 1556 aaPredicted RBP41.91■■■■■ 4.3
CDHR2-205ENST00000510124 SMARCA2P51531 1590 aa41.84■■■■■ 4.29
CDHR2-205ENST00000510124 MROH2BQ7Z745 1585 aa41.71■■■■■ 4.27
CDHR2-205ENST00000510124 HMGXB3Q12766 1538 aa41.69■■■■■ 4.26
CDHR2-205ENST00000510124 BAZ1BQ9UIG0 1483 aaKnown RBP41.6■■■■■ 4.25
CDHR2-205ENST00000510124 PEG3Q9GZU2 1588 aa41.57■■■■■ 4.25
CDHR2-205ENST00000510124 ERCC6Q03468 1493 aa41.23■■■■■ 4.19
CDHR2-205ENST00000510124 NESP48681 1621 aa41.23■■■■■ 4.19
CDHR2-205ENST00000510124 WIZO95785 1651 aa41.23■■■■■ 4.19
CDHR2-205ENST00000510124 RSF1Q96T23 1441 aaPredicted RBP41.04■■■■■ 4.16
CDHR2-205ENST00000510124 LAMC3Q9Y6N6 1575 aa40.92■■■■■ 4.14
CDHR2-205ENST00000510124 CUX2O14529 1486 aa40.87■■■■■ 4.13
CDHR2-205ENST00000510124 CADPSQ9ULU8 1353 aa40.78■■■■■ 4.12
CDHR2-205ENST00000510124 PDS5BQ9NTI5 1447 aa40.73■■■■■ 4.11
CDHR2-205ENST00000510124 TOP2AP11388 1531 aaKnown RBP40.71■■■■■ 4.11
CDHR2-205ENST00000510124 KIF21AQ7Z4S6 1674 aa40.63■■■■■ 4.1
CDHR2-205ENST00000510124 THOC2Q8NI27 1593 aaKnown RBP40.61■■■■■ 4.09
CDHR2-205ENST00000510124 CFTRP13569 1480 aa40.4■■■■■ 4.06
CDHR2-205ENST00000510124 MRC2Q9UBG0 1479 aa40.34■■■■■ 4.05
CDHR2-205ENST00000510124 FANCD2Q9BXW9 1451 aa40.32■■■■■ 4.05
CDHR2-205ENST00000510124 CCDC88BA6NC98 1476 aa40.3■■■■■ 4.04
CDHR2-205ENST00000510124 CEP164Q9UPV0 1460 aa40.3■■■■■ 4.04
CDHR2-205ENST00000510124 DNAJC5Q9H3Z4 198 aa40.29■■■■■ 4.04
CDHR2-205ENST00000510124 WDR62O43379 1518 aa40.19■■■■■ 4.02
CDHR2-205ENST00000510124 URB2Q14146 1524 aaKnown RBP39.96■■■■□ 3.99
CDHR2-205ENST00000510124 PRDM2Q13029 1718 aa39.94■■■■□ 3.98
CDHR2-205ENST00000510124 SUPT5HO00267 1087 aaKnown RBP39.81■■■■□ 3.96
CDHR2-205ENST00000510124 TOPBP1Q92547 1522 aa39.61■■■■□ 3.93
CDHR2-205ENST00000510124 ABCC8Q09428 1581 aa39.5■■■■□ 3.91
CDHR2-205ENST00000510124 DNMBPQ6XZF7 1577 aa39.48■■■■□ 3.91
CDHR2-205ENST00000510124 IFT140Q96RY7 1462 aa39.47■■■■□ 3.91
CDHR2-205ENST00000510124 ZNF608Q9ULD9 1512 aaPredicted RBP39.4■■■■□ 3.9
CDHR2-205ENST00000510124 POLA1P09884 1462 aaPredicted RBP39.25■■■■□ 3.87
CDHR2-205ENST00000510124 OSCARQ8IYS5 282 aa39.2■■■■□ 3.87
CDHR2-205ENST00000510124 TARBP1Q13395 1621 aaKnown RBP39.17■■■■□ 3.86
CDHR2-205ENST00000510124 RAD54L2Q9Y4B4 1467 aa39.16■■■■□ 3.86
CDHR2-205ENST00000510124 EIF4G3O43432 1585 aaKnown RBP39.15■■■■□ 3.86
CDHR2-205ENST00000510124 CUX1P39880 1505 aa39.14■■■■□ 3.86
CDHR2-205ENST00000510124 AQRO60306 1485 aaKnown RBP eCLIP39.13■■■■□ 3.85
CDHR2-205ENST00000510124 SOGA1O94964 1423 aa39.11■■■■□ 3.85
CDHR2-205ENST00000510124 FGD5Q6ZNL6 1462 aa39.1■■■■□ 3.85
CDHR2-205ENST00000510124 TDRD9Q8NDG6 1382 aaKnown RBP39■■■■□ 3.83
CDHR2-205ENST00000510124 TRIM41Q8WV44 630 aa38.88■■■■□ 3.81
CDHR2-205ENST00000510124 FBLN2P98095 1184 aa38.84■■■■□ 3.81
CDHR2-205ENST00000510124 WDR97A6NE52 1622 aa38.74■■■■□ 3.79
CDHR2-205ENST00000510124 CHD1O14646 1710 aa38.73■■■■□ 3.79
CDHR2-205ENST00000510124 SNAPC4Q5SXM2 1469 aa38.73■■■■□ 3.79
CDHR2-205ENST00000510124 WRNQ14191 1432 aaPredicted RBP eCLIP38.72■■■■□ 3.79
CDHR2-205ENST00000510124 GRIN2BQ13224 1484 aa38.67■■■■□ 3.78
CDHR2-205ENST00000510124 ABCA10Q8WWZ4 1543 aa38.64■■■■□ 3.78
CDHR2-205ENST00000510124 SYNJ1O43426 1573 aa38.64■■■■□ 3.78
CDHR2-205ENST00000510124 GAPVD1Q14C86 1478 aa38.62■■■■□ 3.77
CDHR2-205ENST00000510124 TOP2BQ02880 1626 aa38.62■■■■□ 3.77
CDHR2-205ENST00000510124 BIVM-ERCC5R4GMW8 1640 aa38.6■■■■□ 3.77
CDHR2-205ENST00000510124 CHMP7Q8WUX9 453 aaPredicted RBP38.59■■■■□ 3.77
CDHR2-205ENST00000510124 MAGI1Q96QZ7 1491 aaPredicted RBP38.58■■■■□ 3.77
CDHR2-205ENST00000510124 RIMBP3CA6NJZ7 1639 aa38.57■■■■□ 3.77
CDHR2-205ENST00000510124 RIMBP3BA6NNM3 1639 aa38.57■■■■□ 3.77
CDHR2-205ENST00000510124 RIMBP3Q9UFD9 1639 aa38.57■■■■□ 3.77
CDHR2-205ENST00000510124 ARHGEF11O15085 1522 aa38.52■■■■□ 3.76
CDHR2-205ENST00000510124 ABCA5Q8WWZ7 1642 aa38.51■■■■□ 3.76
CDHR2-205ENST00000510124 PBRM1Q86U86 1689 aa38.51■■■■□ 3.76
CDHR2-205ENST00000510124 SYNJ2O15056 1496 aa38.47■■■■□ 3.75
CDHR2-205ENST00000510124 CYB5RLQ6IPT4 315 aa38.31■■■■□ 3.72
CDHR2-205ENST00000510124 CLASP1Q7Z460 1538 aa38.31■■■■□ 3.72
CDHR2-205ENST00000510124 ADAMTS12P58397 1594 aa38.2■■■■□ 3.71
CDHR2-205ENST00000510124 ARAP1Q96P48 1450 aa38.2■■■■□ 3.71
CDHR2-205ENST00000510124 GRIN2AQ12879 1464 aa38.17■■■■□ 3.7
CDHR2-205ENST00000510124 FHAD1B1AJZ9 1412 aa38.15■■■■□ 3.7
CDHR2-205ENST00000510124 ERICH3Q5RHP9 1530 aa38.15■■■■□ 3.7
CDHR2-205ENST00000510124 NUP160Q12769 1436 aa38.01■■■■□ 3.68
CDHR2-205ENST00000510124 CEP170Q5SW79 1584 aa38.01■■■■□ 3.67
CDHR2-205ENST00000510124 KIF27Q86VH2 1401 aa37.94■■■■□ 3.66
CDHR2-205ENST00000510124 IGF1RP08069 1367 aa37.87■■■■□ 3.65
CDHR2-205ENST00000510124 ERCC6L2Q5T890 1561 aa37.83■■■■□ 3.65
CDHR2-205ENST00000510124 SHROOM2Q13796 1616 aa37.72■■■■□ 3.63
CDHR2-205ENST00000510124 TRHP20396 242 aaPredicted RBP37.72■■■■□ 3.63
CDHR2-205ENST00000510124 JPH4Q96JJ6 628 aa37.7■■■■□ 3.63
CDHR2-205ENST00000510124 CUL7Q14999 1698 aa37.69■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms