RNA–Protein interactions for RNA: ENST00000510102.5

YIPF3-214, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-214ENST00000510102 NISCHQ9Y2I1 1504 aa37.44■■■■□ 3.58
YIPF3-214ENST00000510102 CCDC180Q9P1Z9 1646 aa32.64■■■□□ 2.82
YIPF3-214ENST00000510102 ZCCHC6Q5VYS8 1495 aaKnown RBP31.5■■■□□ 2.63
YIPF3-214ENST00000510102 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
YIPF3-214ENST00000510102 DCAF8L2P0C7V8 631 aa30.7■■■□□ 2.51
YIPF3-214ENST00000510102 MYO15BQ96JP2 1530 aa30.61■■■□□ 2.49
YIPF3-214ENST00000510102 ABCC9O60706 1549 aa30.55■■■□□ 2.48
YIPF3-214ENST00000510102 SHROOM4Q9ULL8 1493 aa30.53■■■□□ 2.48
YIPF3-214ENST00000510102 NACADO15069 1562 aa30.33■■■□□ 2.45
YIPF3-214ENST00000510102 RB1CC1Q8TDY2 1594 aa30.01■■■□□ 2.39
YIPF3-214ENST00000510102 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
YIPF3-214ENST00000510102 SUPT5HO00267 1087 aaKnown RBP29.48■■■□□ 2.31
YIPF3-214ENST00000510102 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
YIPF3-214ENST00000510102 RSF1Q96T23 1441 aaPredicted RBP29.08■■■□□ 2.25
YIPF3-214ENST00000510102 BICRAQ9NZM4 1560 aa29.07■■■□□ 2.24
YIPF3-214ENST00000510102 CECR2Q9BXF3 1484 aa29.01■■■□□ 2.24
YIPF3-214ENST00000510102 BAZ1AQ9NRL2 1556 aaPredicted RBP28.93■■■□□ 2.22
YIPF3-214ENST00000510102 MROH2BQ7Z745 1585 aa28.9■■■□□ 2.22
YIPF3-214ENST00000510102 PABPN1Q86U42 306 aaKnown RBP eCLIP28.79■■■□□ 2.2
YIPF3-214ENST00000510102 SMARCA4P51532 1647 aa28.76■■■□□ 2.19
YIPF3-214ENST00000510102 WIZO95785 1651 aa28.68■■■□□ 2.18
YIPF3-214ENST00000510102 TOP2AP11388 1531 aaKnown RBP28.44■■■□□ 2.14
YIPF3-214ENST00000510102 PEG3Q9GZU2 1588 aa28.44■■■□□ 2.14
YIPF3-214ENST00000510102 CHIC1Q5VXU3 224 aa28.37■■■□□ 2.13
YIPF3-214ENST00000510102 SMARCA2P51531 1590 aa28.25■■■□□ 2.11
YIPF3-214ENST00000510102 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
YIPF3-214ENST00000510102 EIF4G1Q04637 1599 aaKnown RBP28.18■■■□□ 2.1
YIPF3-214ENST00000510102 CCDC88BA6NC98 1476 aa28.1■■■□□ 2.09
YIPF3-214ENST00000510102 BAZ1BQ9UIG0 1483 aaKnown RBP28.07■■■□□ 2.08
YIPF3-214ENST00000510102 HMGXB3Q12766 1538 aa27.97■■■□□ 2.07
YIPF3-214ENST00000510102 NCAPD3P42695 1498 aa27.96■■■□□ 2.07
YIPF3-214ENST00000510102 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
YIPF3-214ENST00000510102 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.02
YIPF3-214ENST00000510102 ABCC8Q09428 1581 aa27.54■■■□□ 2
YIPF3-214ENST00000510102 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.97
YIPF3-214ENST00000510102 CFTRP13569 1480 aa27.38■■□□□ 1.97
YIPF3-214ENST00000510102 PRDM2Q13029 1718 aa27.34■■□□□ 1.97
YIPF3-214ENST00000510102 SYNJ1O43426 1573 aa27.26■■□□□ 1.95
YIPF3-214ENST00000510102 CADPSQ9ULU8 1353 aa27.23■■□□□ 1.95
YIPF3-214ENST00000510102 LOC105371045A0A1W2PR82 267 aa27.22■■□□□ 1.95
YIPF3-214ENST00000510102 TOP2BQ02880 1626 aa27.18■■□□□ 1.94
YIPF3-214ENST00000510102 FAM9AQ8IZU1 332 aaPredicted RBP27.18■■□□□ 1.94
YIPF3-214ENST00000510102 EEA1Q15075 1411 aa27.17■■□□□ 1.94
YIPF3-214ENST00000510102 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
YIPF3-214ENST00000510102 SOGA1O94964 1423 aa27.05■■□□□ 1.92
YIPF3-214ENST00000510102 CUX1P39880 1505 aa27.02■■□□□ 1.92
YIPF3-214ENST00000510102 LAMC3Q9Y6N6 1575 aa27■■□□□ 1.91
YIPF3-214ENST00000510102 RUSC2Q8N2Y8 1516 aa26.93■■□□□ 1.9
YIPF3-214ENST00000510102 FANCD2Q9BXW9 1451 aa26.93■■□□□ 1.9
YIPF3-214ENST00000510102 CSRNP3Q8WYN3 585 aa26.9■■□□□ 1.9
YIPF3-214ENST00000510102 NESP48681 1621 aa26.88■■□□□ 1.89
YIPF3-214ENST00000510102 DNAJC5BQ9UF47 199 aa26.79■■□□□ 1.88
YIPF3-214ENST00000510102 KIF21BO75037 1637 aa26.79■■□□□ 1.88
YIPF3-214ENST00000510102 DNMBPQ6XZF7 1577 aa26.77■■□□□ 1.88
YIPF3-214ENST00000510102 PDS5BQ9NTI5 1447 aa26.76■■□□□ 1.87
YIPF3-214ENST00000510102 CEP164Q9UPV0 1460 aa26.76■■□□□ 1.87
YIPF3-214ENST00000510102 GOLGA3Q08378 1498 aa26.75■■□□□ 1.87
YIPF3-214ENST00000510102 EHMT2Q96KQ7 1210 aa26.72■■□□□ 1.87
YIPF3-214ENST00000510102 TNIKQ9UKE5 1360 aa26.7■■□□□ 1.86
YIPF3-214ENST00000510102 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.86
YIPF3-214ENST00000510102 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
YIPF3-214ENST00000510102 TOPBP1Q92547 1522 aa26.67■■□□□ 1.86
YIPF3-214ENST00000510102 KIF21AQ7Z4S6 1674 aa26.62■■□□□ 1.85
YIPF3-214ENST00000510102 ERICH3Q5RHP9 1530 aa26.58■■□□□ 1.85
YIPF3-214ENST00000510102 URB2Q14146 1524 aaKnown RBP26.57■■□□□ 1.84
YIPF3-214ENST00000510102 PRXQ9BXM0 1461 aa26.56■■□□□ 1.84
YIPF3-214ENST00000510102 CUX2O14529 1486 aa26.55■■□□□ 1.84
YIPF3-214ENST00000510102 POLA1P09884 1462 aaPredicted RBP26.55■■□□□ 1.84
YIPF3-214ENST00000510102 CEP162Q5TB80 1403 aa26.54■■□□□ 1.84
YIPF3-214ENST00000510102 UBTFP17480 764 aaKnown RBP26.54■■□□□ 1.84
YIPF3-214ENST00000510102 RAPGEF2Q9Y4G8 1499 aa26.52■■□□□ 1.84
YIPF3-214ENST00000510102 ABCA10Q8WWZ4 1543 aa26.5■■□□□ 1.83
YIPF3-214ENST00000510102 WDR97A6NE52 1622 aa26.42■■□□□ 1.82
YIPF3-214ENST00000510102 RAD54L2Q9Y4B4 1467 aa26.42■■□□□ 1.82
YIPF3-214ENST00000510102 MRC2Q9UBG0 1479 aa26.41■■□□□ 1.82
YIPF3-214ENST00000510102 IGF1RP08069 1367 aa26.4■■□□□ 1.82
YIPF3-214ENST00000510102 CLIP1P30622 1438 aa26.3■■□□□ 1.8
YIPF3-214ENST00000510102 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
YIPF3-214ENST00000510102 CARMIL1Q5VZK9 1371 aa26.28■■□□□ 1.8
YIPF3-214ENST00000510102 CUL7Q14999 1698 aa26.27■■□□□ 1.8
YIPF3-214ENST00000510102 WDR62O43379 1518 aa26.27■■□□□ 1.8
YIPF3-214ENST00000510102 TARBP1Q13395 1621 aaKnown RBP26.27■■□□□ 1.8
YIPF3-214ENST00000510102 TRIM26Q12899 539 aaPredicted RBP26.22■■□□□ 1.79
YIPF3-214ENST00000510102 ERCC6Q03468 1493 aa26.2■■□□□ 1.78
YIPF3-214ENST00000510102 PCGF6Q9BYE7 350 aa26.19■■□□□ 1.78
YIPF3-214ENST00000510102 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
YIPF3-214ENST00000510102 THOC2Q8NI27 1593 aaKnown RBP26.14■■□□□ 1.78
YIPF3-214ENST00000510102 TDRD9Q8NDG6 1382 aaKnown RBP26.13■■□□□ 1.77
YIPF3-214ENST00000510102 IFT140Q96RY7 1462 aa26.13■■□□□ 1.77
YIPF3-214ENST00000510102 VPS8Q8N3P4 1428 aa26.12■■□□□ 1.77
YIPF3-214ENST00000510102 PBRM1Q86U86 1689 aa26.06■■□□□ 1.76
YIPF3-214ENST00000510102 ARAP1Q96P48 1450 aa26.02■■□□□ 1.76
YIPF3-214ENST00000510102 CTTNBP2Q8WZ74 1663 aa25.99■■□□□ 1.75
YIPF3-214ENST00000510102 ARHGAP35Q9NRY4 1499 aa25.98■■□□□ 1.75
YIPF3-214ENST00000510102 GRIN2BQ13224 1484 aa25.96■■□□□ 1.75
YIPF3-214ENST00000510102 RANGAP1P46060 587 aaPredicted RBP25.96■■□□□ 1.75
YIPF3-214ENST00000510102 AQRO60306 1485 aaKnown RBP eCLIP25.94■■□□□ 1.742e-8■■■□□ 18.4
YIPF3-214ENST00000510102 ADAMTS12P58397 1594 aa25.92■■□□□ 1.74
YIPF3-214ENST00000510102 FHAD1B1AJZ9 1412 aa25.92■■□□□ 1.74
YIPF3-214ENST00000510102 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms