RNA–Protein interactions for RNA: ENST00000509632.5

SDHA-212, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-212ENST00000509632 NISCHQ9Y2I1 1504 aa53.61■■■■■ 6.17
SDHA-212ENST00000509632 CCDC180Q9P1Z9 1646 aa47.82■■■■■ 5.25
SDHA-212ENST00000509632 ABCC9O60706 1549 aa47.77■■■■■ 5.24
SDHA-212ENST00000509632 RB1CC1Q8TDY2 1594 aa45.5■■■■■ 4.87
SDHA-212ENST00000509632 DCAF8L2P0C7V8 631 aa45.43■■■■■ 4.86
SDHA-212ENST00000509632 NACADO15069 1562 aa45.26■■■■■ 4.84
SDHA-212ENST00000509632 MYO15BQ96JP2 1530 aa44.7■■■■■ 4.75
SDHA-212ENST00000509632 DNAJC5BQ9UF47 199 aa44.68■■■■■ 4.74
SDHA-212ENST00000509632 PABPN1Q86U42 306 aaKnown RBP eCLIP44.66■■■■■ 4.74
SDHA-212ENST00000509632 ZCCHC6Q5VYS8 1495 aaKnown RBP44.44■■■■■ 4.7
SDHA-212ENST00000509632 UNC13AQ9UPW8 1703 aa44.36■■■■■ 4.69
SDHA-212ENST00000509632 DCAF1Q9Y4B6 1507 aa44.24■■■■■ 4.67
SDHA-212ENST00000509632 BICRAQ9NZM4 1560 aa44.14■■■■■ 4.66
SDHA-212ENST00000509632 SCRIBQ14160 1630 aa43.71■■■■■ 4.59
SDHA-212ENST00000509632 SHROOM4Q9ULL8 1493 aa43.53■■■■■ 4.56
SDHA-212ENST00000509632 CC2D2AQ9P2K1 1620 aa43.09■■■■■ 4.49
SDHA-212ENST00000509632 EIF4G1Q04637 1599 aaKnown RBP43.06■■■■■ 4.48
SDHA-212ENST00000509632 CECR2Q9BXF3 1484 aa42.99■■■■■ 4.47
SDHA-212ENST00000509632 NCAPD3P42695 1498 aa41.85■■■■■ 4.29
SDHA-212ENST00000509632 ATAD2BQ9ULI0 1458 aa41.76■■■■■ 4.28
SDHA-212ENST00000509632 SMARCA4P51532 1647 aa41.69■■■■■ 4.27
SDHA-212ENST00000509632 SMARCA2P51531 1590 aa41.59■■■■■ 4.25
SDHA-212ENST00000509632 BAZ1AQ9NRL2 1556 aaPredicted RBP41.57■■■■■ 4.25
SDHA-212ENST00000509632 HMGXB3Q12766 1538 aa41.45■■■■■ 4.23
SDHA-212ENST00000509632 BAZ1BQ9UIG0 1483 aaKnown RBP41.35■■■■■ 4.21
SDHA-212ENST00000509632 MROH2BQ7Z745 1585 aa41.33■■■■■ 4.21
SDHA-212ENST00000509632 PEG3Q9GZU2 1588 aa41.26■■■■■ 4.2
SDHA-212ENST00000509632 ERCC6Q03468 1493 aa41.22■■■■■ 4.19
SDHA-212ENST00000509632 NESP48681 1621 aa41.11■■■■■ 4.17
SDHA-212ENST00000509632 CUX2O14529 1486 aa40.98■■■■■ 4.15
SDHA-212ENST00000509632 WIZO95785 1651 aa40.82■■■■■ 4.12
SDHA-212ENST00000509632 DNAJC5Q9H3Z4 198 aa40.81■■■■■ 4.12
SDHA-212ENST00000509632 LAMC3Q9Y6N6 1575 aa40.77■■■■■ 4.12
SDHA-212ENST00000509632 PDS5BQ9NTI5 1447 aa40.65■■■■■ 4.1
SDHA-212ENST00000509632 CADPSQ9ULU8 1353 aa40.64■■■■■ 4.1
SDHA-212ENST00000509632 RSF1Q96T23 1441 aaPredicted RBP40.63■■■■■ 4.09
SDHA-212ENST00000509632 THOC2Q8NI27 1593 aaKnown RBP40.48■■■■■ 4.07
SDHA-212ENST00000509632 KIF21AQ7Z4S6 1674 aa40.45■■■■■ 4.07
SDHA-212ENST00000509632 TOP2AP11388 1531 aaKnown RBP40.29■■■■■ 4.04
SDHA-212ENST00000509632 MRC2Q9UBG0 1479 aa40.22■■■■■ 4.03
SDHA-212ENST00000509632 CFTRP13569 1480 aa40.18■■■■■ 4.02
SDHA-212ENST00000509632 FANCD2Q9BXW9 1451 aa40.13■■■■■ 4.02
SDHA-212ENST00000509632 CEP164Q9UPV0 1460 aa40.12■■■■■ 4.01
SDHA-212ENST00000509632 WDR62O43379 1518 aa40.05■■■■■ 4
SDHA-212ENST00000509632 CCDC88BA6NC98 1476 aa39.94■■■■□ 3.98
SDHA-212ENST00000509632 URB2Q14146 1524 aaKnown RBP39.75■■■■□ 3.95
SDHA-212ENST00000509632 PRDM2Q13029 1718 aa39.58■■■■□ 3.93
SDHA-212ENST00000509632 TOPBP1Q92547 1522 aa39.38■■■■□ 3.89
SDHA-212ENST00000509632 OSCARQ8IYS5 282 aa39.36■■■■□ 3.89
SDHA-212ENST00000509632 IFT140Q96RY7 1462 aa39.32■■■■□ 3.89
SDHA-212ENST00000509632 ABCC8Q09428 1581 aa39.32■■■■□ 3.88
SDHA-212ENST00000509632 ZNF608Q9ULD9 1512 aaPredicted RBP39.25■■■■□ 3.87
SDHA-212ENST00000509632 SUPT5HO00267 1087 aaKnown RBP39.22■■■■□ 3.87
SDHA-212ENST00000509632 DNMBPQ6XZF7 1577 aa39.21■■■■□ 3.87
SDHA-212ENST00000509632 TRIM41Q8WV44 630 aa39.19■■■■□ 3.86
SDHA-212ENST00000509632 AQRO60306 1485 aaKnown RBP eCLIP38.99■■■■□ 3.833e-7■■■□□ 18
SDHA-212ENST00000509632 POLA1P09884 1462 aaPredicted RBP38.99■■■■□ 3.83
SDHA-212ENST00000509632 TARBP1Q13395 1621 aaKnown RBP38.94■■■■□ 3.82
SDHA-212ENST00000509632 EIF4G3O43432 1585 aaKnown RBP38.93■■■■□ 3.82
SDHA-212ENST00000509632 SOGA1O94964 1423 aa38.92■■■■□ 3.82
SDHA-212ENST00000509632 RAD54L2Q9Y4B4 1467 aa38.91■■■■□ 3.82
SDHA-212ENST00000509632 TDRD9Q8NDG6 1382 aaKnown RBP38.83■■■■□ 3.81
SDHA-212ENST00000509632 FGD5Q6ZNL6 1462 aa38.79■■■■□ 3.8
SDHA-212ENST00000509632 CUX1P39880 1505 aa38.79■■■■□ 3.8
SDHA-212ENST00000509632 FBLN2P98095 1184 aa38.79■■■■□ 3.8
SDHA-212ENST00000509632 RIMBP3CA6NJZ7 1639 aa38.6■■■■□ 3.77
SDHA-212ENST00000509632 RIMBP3BA6NNM3 1639 aa38.6■■■■□ 3.77
SDHA-212ENST00000509632 RIMBP3Q9UFD9 1639 aa38.6■■■■□ 3.77
SDHA-212ENST00000509632 CHD1O14646 1710 aa38.58■■■■□ 3.77
SDHA-212ENST00000509632 ARHGEF11O15085 1522 aa38.54■■■■□ 3.76
SDHA-212ENST00000509632 CHMP7Q8WUX9 453 aaPredicted RBP38.52■■■■□ 3.76
SDHA-212ENST00000509632 SNAPC4Q5SXM2 1469 aa38.52■■■■□ 3.76
SDHA-212ENST00000509632 WDR97A6NE52 1622 aa38.51■■■■□ 3.76
SDHA-212ENST00000509632 GRIN2BQ13224 1484 aa38.47■■■■□ 3.75
SDHA-212ENST00000509632 CYB5RLQ6IPT4 315 aa38.44■■■■□ 3.74
SDHA-212ENST00000509632 MAGI1Q96QZ7 1491 aaPredicted RBP38.41■■■■□ 3.74
SDHA-212ENST00000509632 GAPVD1Q14C86 1478 aa38.4■■■■□ 3.74
SDHA-212ENST00000509632 ABCA10Q8WWZ4 1543 aa38.36■■■■□ 3.73
SDHA-212ENST00000509632 WRNQ14191 1432 aaPredicted RBP eCLIP38.33■■■■□ 3.73
SDHA-212ENST00000509632 SYNJ2O15056 1496 aa38.3■■■■□ 3.72
SDHA-212ENST00000509632 TOP2BQ02880 1626 aa38.21■■■■□ 3.71
SDHA-212ENST00000509632 SYNJ1O43426 1573 aa38.2■■■■□ 3.71
SDHA-212ENST00000509632 PBRM1Q86U86 1689 aa38.2■■■■□ 3.71
SDHA-212ENST00000509632 ARAP1Q96P48 1450 aa38.19■■■■□ 3.7
SDHA-212ENST00000509632 ABCA5Q8WWZ7 1642 aa38.19■■■■□ 3.7
SDHA-212ENST00000509632 CLASP1Q7Z460 1538 aa38.17■■■■□ 3.7
SDHA-212ENST00000509632 BIVM-ERCC5R4GMW8 1640 aa38.16■■■■□ 3.7
SDHA-212ENST00000509632 GRIN2AQ12879 1464 aa37.96■■■■□ 3.67
SDHA-212ENST00000509632 TRHP20396 242 aaPredicted RBP37.94■■■■□ 3.66
SDHA-212ENST00000509632 FHAD1B1AJZ9 1412 aa37.92■■■■□ 3.66
SDHA-212ENST00000509632 ADAMTS12P58397 1594 aa37.89■■■■□ 3.66
SDHA-212ENST00000509632 ERICH3Q5RHP9 1530 aa37.87■■■■□ 3.65
SDHA-212ENST00000509632 NUP160Q12769 1436 aa37.82■■■■□ 3.64
SDHA-212ENST00000509632 CEP170Q5SW79 1584 aa37.77■■■■□ 3.64
SDHA-212ENST00000509632 ERCC6L2Q5T890 1561 aa37.66■■■■□ 3.62
SDHA-212ENST00000509632 JPH4Q96JJ6 628 aa37.61■■■■□ 3.61
SDHA-212ENST00000509632 IGF1RP08069 1367 aa37.59■■■■□ 3.61
SDHA-212ENST00000509632 KIF27Q86VH2 1401 aa37.58■■■■□ 3.61
SDHA-212ENST00000509632 SHROOM2Q13796 1616 aa37.53■■■■□ 3.6
SDHA-212ENST00000509632 PRG4Q92954 1404 aaPredicted RBP37.52■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms