RNA–Protein interactions for RNA: ENST00000509377.1

FAM47E-STBD1-201, Transcript of FAM47E-STBD1 readthrough, humanhuman

TSL 2

Gene FAM47E-STBD1, Length 1,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47E-STBD1-201ENST00000509377 NISCHQ9Y2I1 1504 aa53■■■■■ 6.08
FAM47E-STBD1-201ENST00000509377 CCDC180Q9P1Z9 1646 aa46.86■■■■■ 5.09
FAM47E-STBD1-201ENST00000509377 ABCC9O60706 1549 aa45.3■■■■■ 4.84
FAM47E-STBD1-201ENST00000509377 ZCCHC6Q5VYS8 1495 aaKnown RBP44.28■■■■■ 4.68
FAM47E-STBD1-201ENST00000509377 DCAF8L2P0C7V8 631 aa44.1■■■■■ 4.65
FAM47E-STBD1-201ENST00000509377 NACADO15069 1562 aa43.91■■■■■ 4.62
FAM47E-STBD1-201ENST00000509377 DCAF1Q9Y4B6 1507 aa43.87■■■■■ 4.61
FAM47E-STBD1-201ENST00000509377 RB1CC1Q8TDY2 1594 aa43.83■■■■■ 4.61
FAM47E-STBD1-201ENST00000509377 MYO15BQ96JP2 1530 aa43.82■■■■■ 4.6
FAM47E-STBD1-201ENST00000509377 UNC13AQ9UPW8 1703 aa42.86■■■■■ 4.45
FAM47E-STBD1-201ENST00000509377 SCRIBQ14160 1630 aa42.84■■■■■ 4.45
FAM47E-STBD1-201ENST00000509377 BICRAQ9NZM4 1560 aa42.48■■■■■ 4.39
FAM47E-STBD1-201ENST00000509377 PABPN1Q86U42 306 aaKnown RBP eCLIP42.44■■■■■ 4.38
FAM47E-STBD1-201ENST00000509377 SHROOM4Q9ULL8 1493 aa42.28■■■■■ 4.36
FAM47E-STBD1-201ENST00000509377 EIF4G1Q04637 1599 aaKnown RBP41.31■■■■■ 4.2
FAM47E-STBD1-201ENST00000509377 CECR2Q9BXF3 1484 aa41.24■■■■■ 4.19
FAM47E-STBD1-201ENST00000509377 BAZ1AQ9NRL2 1556 aaPredicted RBP41.05■■■■■ 4.16
FAM47E-STBD1-201ENST00000509377 DNAJC5BQ9UF47 199 aa41.02■■■■■ 4.16
FAM47E-STBD1-201ENST00000509377 SMARCA4P51532 1647 aa41.01■■■■■ 4.16
FAM47E-STBD1-201ENST00000509377 CC2D2AQ9P2K1 1620 aa41■■■■■ 4.15
FAM47E-STBD1-201ENST00000509377 MROH2BQ7Z745 1585 aa40.87■■■■■ 4.13
FAM47E-STBD1-201ENST00000509377 ATAD2BQ9ULI0 1458 aa40.63■■■■■ 4.09
FAM47E-STBD1-201ENST00000509377 RSF1Q96T23 1441 aaPredicted RBP40.61■■■■■ 4.09
FAM47E-STBD1-201ENST00000509377 SMARCA2P51531 1590 aa40.61■■■■■ 4.09
FAM47E-STBD1-201ENST00000509377 PEG3Q9GZU2 1588 aa40.58■■■■■ 4.09
FAM47E-STBD1-201ENST00000509377 NCAPD3P42695 1498 aa40.5■■■■■ 4.07
FAM47E-STBD1-201ENST00000509377 WIZO95785 1651 aa40.48■■■■■ 4.07
FAM47E-STBD1-201ENST00000509377 HMGXB3Q12766 1538 aa40.36■■■■■ 4.05
FAM47E-STBD1-201ENST00000509377 BAZ1BQ9UIG0 1483 aaKnown RBP40.34■■■■■ 4.05
FAM47E-STBD1-201ENST00000509377 SUPT5HO00267 1087 aaKnown RBP40.08■■■■■ 4.01
FAM47E-STBD1-201ENST00000509377 TOP2AP11388 1531 aaKnown RBP40.07■■■■■ 4
FAM47E-STBD1-201ENST00000509377 CCDC88BA6NC98 1476 aa39.6■■■■□ 3.93
FAM47E-STBD1-201ENST00000509377 NESP48681 1621 aa39.38■■■■□ 3.89
FAM47E-STBD1-201ENST00000509377 CADPSQ9ULU8 1353 aa39.36■■■■□ 3.89
FAM47E-STBD1-201ENST00000509377 LAMC3Q9Y6N6 1575 aa39.35■■■■□ 3.89
FAM47E-STBD1-201ENST00000509377 CFTRP13569 1480 aa39.25■■■■□ 3.87
FAM47E-STBD1-201ENST00000509377 PDS5BQ9NTI5 1447 aa39.07■■■■□ 3.85
FAM47E-STBD1-201ENST00000509377 PRDM2Q13029 1718 aa39.03■■■■□ 3.84
FAM47E-STBD1-201ENST00000509377 ERCC6Q03468 1493 aa39■■■■□ 3.83
FAM47E-STBD1-201ENST00000509377 KIF21AQ7Z4S6 1674 aa38.94■■■■□ 3.82
FAM47E-STBD1-201ENST00000509377 FANCD2Q9BXW9 1451 aa38.92■■■■□ 3.82
FAM47E-STBD1-201ENST00000509377 CEP164Q9UPV0 1460 aa38.82■■■■□ 3.81
FAM47E-STBD1-201ENST00000509377 THOC2Q8NI27 1593 aaKnown RBP38.64■■■■□ 3.78
FAM47E-STBD1-201ENST00000509377 MRC2Q9UBG0 1479 aa38.64■■■■□ 3.78
FAM47E-STBD1-201ENST00000509377 URB2Q14146 1524 aaKnown RBP38.5■■■■□ 3.75
FAM47E-STBD1-201ENST00000509377 WDR62O43379 1518 aa38.48■■■■□ 3.75
FAM47E-STBD1-201ENST00000509377 ABCC8Q09428 1581 aa38.39■■■■□ 3.74
FAM47E-STBD1-201ENST00000509377 DNMBPQ6XZF7 1577 aa38.38■■■■□ 3.73
FAM47E-STBD1-201ENST00000509377 TOPBP1Q92547 1522 aa38.37■■■■□ 3.73
FAM47E-STBD1-201ENST00000509377 CUX2O14529 1486 aa38.35■■■■□ 3.73
FAM47E-STBD1-201ENST00000509377 CUX1P39880 1505 aa38.3■■■■□ 3.72
FAM47E-STBD1-201ENST00000509377 WRNQ14191 1432 aaPredicted RBP eCLIP38.28■■■■□ 3.72
FAM47E-STBD1-201ENST00000509377 SYNJ1O43426 1573 aa38.16■■■■□ 3.7
FAM47E-STBD1-201ENST00000509377 TOP2BQ02880 1626 aa38.14■■■■□ 3.7
FAM47E-STBD1-201ENST00000509377 BIVM-ERCC5R4GMW8 1640 aa38.14■■■■□ 3.7
FAM47E-STBD1-201ENST00000509377 POLA1P09884 1462 aaPredicted RBP38.08■■■■□ 3.69
FAM47E-STBD1-201ENST00000509377 FGD5Q6ZNL6 1462 aa38.08■■■■□ 3.69
FAM47E-STBD1-201ENST00000509377 IFT140Q96RY7 1462 aa37.97■■■■□ 3.67
FAM47E-STBD1-201ENST00000509377 SOGA1O94964 1423 aa37.94■■■■□ 3.66
FAM47E-STBD1-201ENST00000509377 RAD54L2Q9Y4B4 1467 aa37.93■■■■□ 3.66
FAM47E-STBD1-201ENST00000509377 TARBP1Q13395 1621 aaKnown RBP37.91■■■■□ 3.66
FAM47E-STBD1-201ENST00000509377 TRIM41Q8WV44 630 aa37.82■■■■□ 3.64
FAM47E-STBD1-201ENST00000509377 ZNF608Q9ULD9 1512 aaPredicted RBP37.76■■■■□ 3.64
FAM47E-STBD1-201ENST00000509377 WDR97A6NE52 1622 aa37.74■■■■□ 3.63
FAM47E-STBD1-201ENST00000509377 CHIC1Q5VXU3 224 aa37.74■■■■□ 3.63
FAM47E-STBD1-201ENST00000509377 ABCA10Q8WWZ4 1543 aa37.73■■■■□ 3.63
FAM47E-STBD1-201ENST00000509377 TDRD9Q8NDG6 1382 aaKnown RBP37.66■■■■□ 3.62
FAM47E-STBD1-201ENST00000509377 EIF4G3O43432 1585 aaKnown RBP37.65■■■■□ 3.62
FAM47E-STBD1-201ENST00000509377 AQRO60306 1485 aaKnown RBP eCLIP37.63■■■■□ 3.61
FAM47E-STBD1-201ENST00000509377 ABCA5Q8WWZ7 1642 aa37.54■■■■□ 3.6
FAM47E-STBD1-201ENST00000509377 GAPVD1Q14C86 1478 aa37.52■■■■□ 3.6
FAM47E-STBD1-201ENST00000509377 KIF27Q86VH2 1401 aa37.44■■■■□ 3.58
FAM47E-STBD1-201ENST00000509377 GRIN2BQ13224 1484 aa37.43■■■■□ 3.58
FAM47E-STBD1-201ENST00000509377 PBRM1Q86U86 1689 aa37.42■■■■□ 3.58
FAM47E-STBD1-201ENST00000509377 SNAPC4Q5SXM2 1469 aa37.3■■■■□ 3.56
FAM47E-STBD1-201ENST00000509377 ERICH3Q5RHP9 1530 aa37.3■■■■□ 3.56
FAM47E-STBD1-201ENST00000509377 RUSC2Q8N2Y8 1516 aa37.3■■■■□ 3.56
FAM47E-STBD1-201ENST00000509377 MAGI1Q96QZ7 1491 aaPredicted RBP37.26■■■■□ 3.55
FAM47E-STBD1-201ENST00000509377 IGF1RP08069 1367 aa37.21■■■■□ 3.55
FAM47E-STBD1-201ENST00000509377 ADAMTS12P58397 1594 aa37.14■■■■□ 3.54
FAM47E-STBD1-201ENST00000509377 EEA1Q15075 1411 aa37.12■■■■□ 3.53
FAM47E-STBD1-201ENST00000509377 SYNJ2O15056 1496 aa37.11■■■■□ 3.53
FAM47E-STBD1-201ENST00000509377 FHAD1B1AJZ9 1412 aa37.1■■■■□ 3.53
FAM47E-STBD1-201ENST00000509377 FBLN2P98095 1184 aa37.09■■■■□ 3.53
FAM47E-STBD1-201ENST00000509377 CUL7Q14999 1698 aa37.08■■■■□ 3.53
FAM47E-STBD1-201ENST00000509377 CHD1O14646 1710 aa37.07■■■■□ 3.52
FAM47E-STBD1-201ENST00000509377 CHMP7Q8WUX9 453 aaPredicted RBP37.07■■■■□ 3.52
FAM47E-STBD1-201ENST00000509377 FAM9AQ8IZU1 332 aaPredicted RBP37.05■■■■□ 3.52
FAM47E-STBD1-201ENST00000509377 CARMIL1Q5VZK9 1371 aa37.01■■■■□ 3.51
FAM47E-STBD1-201ENST00000509377 CSRNP3Q8WYN3 585 aa37■■■■□ 3.51
FAM47E-STBD1-201ENST00000509377 GRIN2AQ12879 1464 aa36.94■■■■□ 3.5
FAM47E-STBD1-201ENST00000509377 OSCARQ8IYS5 282 aa36.88■■■■□ 3.5
FAM47E-STBD1-201ENST00000509377 PRXQ9BXM0 1461 aa36.86■■■■□ 3.49
FAM47E-STBD1-201ENST00000509377 RAPGEF2Q9Y4G8 1499 aa36.86■■■■□ 3.49
FAM47E-STBD1-201ENST00000509377 NUP160Q12769 1436 aa36.75■■■■□ 3.47
FAM47E-STBD1-201ENST00000509377 CEP170Q5SW79 1584 aa36.74■■■■□ 3.47
FAM47E-STBD1-201ENST00000509377 KIF21BO75037 1637 aa36.69■■■■□ 3.46
FAM47E-STBD1-201ENST00000509377 CLASP1Q7Z460 1538 aa36.65■■■■□ 3.46
FAM47E-STBD1-201ENST00000509377 KIAA0586Q9BVV6 1533 aa36.55■■■■□ 3.44
FAM47E-STBD1-201ENST00000509377 EHMT2Q96KQ7 1210 aa36.54■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms