RNA–Protein interactions for RNA: ENST00000509208.1

COPG1-204, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 472 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-204ENST00000509208 NISCHQ9Y2I1 1504 aa25.27■■□□□ 1.64
COPG1-204ENST00000509208 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
COPG1-204ENST00000509208 ABCC9O60706 1549 aa21.73■■□□□ 1.07
COPG1-204ENST00000509208 ZCCHC6Q5VYS8 1495 aaKnown RBP21.13■□□□□ 0.97
COPG1-204ENST00000509208 NACADO15069 1562 aa21.02■□□□□ 0.95
COPG1-204ENST00000509208 RB1CC1Q8TDY2 1594 aa20.98■□□□□ 0.95
COPG1-204ENST00000509208 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
COPG1-204ENST00000509208 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
COPG1-204ENST00000509208 DCAF8L2P0C7V8 631 aa20.86■□□□□ 0.93
COPG1-204ENST00000509208 UNC13AQ9UPW8 1703 aa20.62■□□□□ 0.89
COPG1-204ENST00000509208 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
COPG1-204ENST00000509208 BICRAQ9NZM4 1560 aa20.41■□□□□ 0.86
COPG1-204ENST00000509208 PABPN1Q86U42 306 aaKnown RBP eCLIP20.27■□□□□ 0.84
COPG1-204ENST00000509208 SHROOM4Q9ULL8 1493 aa20.18■□□□□ 0.82
COPG1-204ENST00000509208 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.76
COPG1-204ENST00000509208 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
COPG1-204ENST00000509208 CC2D2AQ9P2K1 1620 aa19.7■□□□□ 0.74
COPG1-204ENST00000509208 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
COPG1-204ENST00000509208 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
COPG1-204ENST00000509208 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
COPG1-204ENST00000509208 MROH2BQ7Z745 1585 aa19.49■□□□□ 0.71
COPG1-204ENST00000509208 PEG3Q9GZU2 1588 aa19.43■□□□□ 0.7
COPG1-204ENST00000509208 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
COPG1-204ENST00000509208 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
COPG1-204ENST00000509208 NCAPD3P42695 1498 aa19.35■□□□□ 0.69
COPG1-204ENST00000509208 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
COPG1-204ENST00000509208 WIZO95785 1651 aa19.3■□□□□ 0.68
COPG1-204ENST00000509208 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
COPG1-204ENST00000509208 BAZ1BQ9UIG0 1483 aaKnown RBP19.27■□□□□ 0.67
COPG1-204ENST00000509208 TOP2AP11388 1531 aaKnown RBP19.11■□□□□ 0.65
COPG1-204ENST00000509208 NESP48681 1621 aa18.88■□□□□ 0.61
COPG1-204ENST00000509208 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
COPG1-204ENST00000509208 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
COPG1-204ENST00000509208 SUPT5HO00267 1087 aaKnown RBP18.83■□□□□ 0.6
COPG1-204ENST00000509208 CADPSQ9ULU8 1353 aa18.78■□□□□ 0.6
COPG1-204ENST00000509208 CFTRP13569 1480 aa18.75■□□□□ 0.59
COPG1-204ENST00000509208 PRDM2Q13029 1718 aa18.72■□□□□ 0.59
COPG1-204ENST00000509208 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
COPG1-204ENST00000509208 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
COPG1-204ENST00000509208 PDS5BQ9NTI5 1447 aa18.65■□□□□ 0.58
COPG1-204ENST00000509208 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
COPG1-204ENST00000509208 FANCD2Q9BXW9 1451 aa18.6■□□□□ 0.57
COPG1-204ENST00000509208 CEP164Q9UPV0 1460 aa18.57■□□□□ 0.56
COPG1-204ENST00000509208 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.55
COPG1-204ENST00000509208 WDR62O43379 1518 aa18.49■□□□□ 0.55
COPG1-204ENST00000509208 CUX2O14529 1486 aa18.46■□□□□ 0.54
COPG1-204ENST00000509208 URB2Q14146 1524 aaKnown RBP18.44■□□□□ 0.54
COPG1-204ENST00000509208 DNMBPQ6XZF7 1577 aa18.35■□□□□ 0.53
COPG1-204ENST00000509208 TOPBP1Q92547 1522 aa18.34■□□□□ 0.53
COPG1-204ENST00000509208 CUX1P39880 1505 aa18.29■□□□□ 0.52
COPG1-204ENST00000509208 ABCC8Q09428 1581 aa18.29■□□□□ 0.52
COPG1-204ENST00000509208 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
COPG1-204ENST00000509208 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
COPG1-204ENST00000509208 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
COPG1-204ENST00000509208 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
COPG1-204ENST00000509208 FGD5Q6ZNL6 1462 aa18.18■□□□□ 0.5
COPG1-204ENST00000509208 TOP2BQ02880 1626 aa18.17■□□□□ 0.5
COPG1-204ENST00000509208 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
COPG1-204ENST00000509208 IFT140Q96RY7 1462 aa18.15■□□□□ 0.5
COPG1-204ENST00000509208 WDR97A6NE52 1622 aa18.11■□□□□ 0.49
COPG1-204ENST00000509208 RAD54L2Q9Y4B4 1467 aa18.1■□□□□ 0.49
COPG1-204ENST00000509208 ZNF608Q9ULD9 1512 aaPredicted RBP18.09■□□□□ 0.49
COPG1-204ENST00000509208 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.48
COPG1-204ENST00000509208 SOGA1O94964 1423 aa18.06■□□□□ 0.48
COPG1-204ENST00000509208 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
COPG1-204ENST00000509208 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
COPG1-204ENST00000509208 AQRO60306 1485 aaKnown RBP eCLIP17.96■□□□□ 0.471e-8■■■■■ 47.3
COPG1-204ENST00000509208 TDRD9Q8NDG6 1382 aaKnown RBP17.94■□□□□ 0.46
COPG1-204ENST00000509208 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
COPG1-204ENST00000509208 GAPVD1Q14C86 1478 aa17.89■□□□□ 0.45
COPG1-204ENST00000509208 GRIN2BQ13224 1484 aa17.87■□□□□ 0.45
COPG1-204ENST00000509208 SNAPC4Q5SXM2 1469 aa17.85■□□□□ 0.45
COPG1-204ENST00000509208 MAGI1Q96QZ7 1491 aaPredicted RBP17.82■□□□□ 0.44
COPG1-204ENST00000509208 CHD1O14646 1710 aa17.82■□□□□ 0.44
COPG1-204ENST00000509208 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
COPG1-204ENST00000509208 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
COPG1-204ENST00000509208 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
COPG1-204ENST00000509208 KIF27Q86VH2 1401 aa17.77■□□□□ 0.44
COPG1-204ENST00000509208 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
COPG1-204ENST00000509208 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
COPG1-204ENST00000509208 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
COPG1-204ENST00000509208 CUL7Q14999 1698 aa17.69■□□□□ 0.42
COPG1-204ENST00000509208 FHAD1B1AJZ9 1412 aa17.68■□□□□ 0.42
COPG1-204ENST00000509208 GRIN2AQ12879 1464 aa17.66■□□□□ 0.42
COPG1-204ENST00000509208 IGF1RP08069 1367 aa17.66■□□□□ 0.42
COPG1-204ENST00000509208 FBLN2P98095 1184 aa17.62■□□□□ 0.41
COPG1-204ENST00000509208 CLASP1Q7Z460 1538 aa17.62■□□□□ 0.41
COPG1-204ENST00000509208 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
COPG1-204ENST00000509208 CHMP7Q8WUX9 453 aaPredicted RBP17.61■□□□□ 0.41
COPG1-204ENST00000509208 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
COPG1-204ENST00000509208 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
COPG1-204ENST00000509208 NUP160Q12769 1436 aa17.59■□□□□ 0.41
COPG1-204ENST00000509208 CARMIL1Q5VZK9 1371 aa17.56■□□□□ 0.4
COPG1-204ENST00000509208 EEA1Q15075 1411 aa17.54■□□□□ 0.4
COPG1-204ENST00000509208 PRXQ9BXM0 1461 aa17.51■□□□□ 0.39
COPG1-204ENST00000509208 RAPGEF2Q9Y4G8 1499 aa17.5■□□□□ 0.39
COPG1-204ENST00000509208 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
COPG1-204ENST00000509208 RIMBP3CA6NJZ7 1639 aa17.46■□□□□ 0.39
COPG1-204ENST00000509208 RIMBP3BA6NNM3 1639 aa17.46■□□□□ 0.39
COPG1-204ENST00000509208 RIMBP3Q9UFD9 1639 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms